1.ecDNA/eccDNA datasets in Homo sapiens.![]() |
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2.ecDNA/eccDNA datasets in Mus musculus.![]() |
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3.eccDNA datasets in Yeast.![]() |
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4.eccDNA datasets in Gallus gallus.![]() |
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5.eccDNA datasets in Arabidopsis thaliana.![]() |
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6.eccDNA datasets in other species.![]() |
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7.Enhancer datasets used in eccDNA Atlas(derived from EnhancerDB, ENdb).![]() |
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8.Super-enhancer datasets used in eccDNA Atlas(derived from dbSUPER,SEA,SEdb).![]() |
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9.SNP datasets used in eccDNA Atlas.![]() |
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10.eQTL datasets used in eccDNA Atlas.![]() |
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11.CTCF binding site datasets used in eccDNA Atlas.![]() |
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12.Chromatin accessibility peak datasets used in eccDNA Atlas.![]() |
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13.Enhancers data identified in 20 TCGA tumors.![]() |
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Items | Description |
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eccDNA ID | Numbers named according to order and species. |
Species | Species information corresponding to eccDNA. |
eccDNA type | Types of eccDNA(microDNA,eccDNA,spcDNA,etc). |
Location | Genomic location of eccDNA. |
Health/Disease | Judgment of whether eccDNA belongs to the type of health or disease. |
Tissue/Cell line | The specific tissue or cells used in the experiment or prediction. |
Disease name | The specific disease name corresponding to eccDNA. |
Experiment/Prediction | Determine whether eccDNA is obtained by prediction or experimental confirmation. |
Validation strategies | specific validation strategies(FISH,DNA-sequencing,ecc_finder,etc). |
Pubmed ID | PMID of the article. |