EnhancerDB
  1. Home
  2. Enhancers
  3. vista10[chr1:941791-942135]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista10[chr1:941791-942135]
Back to top
Tissue distribution of vista10
Back to top
Transcription factor that possibly regulate vista10[chr1:941791-942135]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 941805 941813 EHF JASPAR yes 118213438
chr1 941812 941816 H4TF2 TRANSFAC yes 118213439
chr1 941815 941825 FIGLA JASPAR yes 118213440
chr1 941819 941840 ZNF263 JASPAR yes 118213441
chr1 941842 941856 EBF1 JASPAR yes 118213442
chr1 941843 941849 MZF1 JASPAR yes 118213443
chr1 941843 941854 EBF1 JASPAR yes 118213444
chr1 941844 941855 EBF1 JASPAR yes 118213445
chr1 941859 941869 SP1 JASPAR yes 118213446
chr1 941861 941867 MAZ TRANSFAC yes 118213447
chr1 941874 941885 FOXH1 JASPAR yes 118213448
chr1 941880 941890 SREBF1 JASPAR yes 118213449
chr1 941880 941890 SREBF2 JASPAR yes 118213450
chr1 941896 941901 ATF1 TRANSFAC yes 118213451
chr1 941898 941906 FOXO3 JASPAR yes 118213452
chr1 941899 941911 PBX1 JASPAR yes 118213453
chr1 941923 941928 SP1 TRANSFAC yes 118213454
chr1 941926 941943 RARA JASPAR yes 118213455
chr1 941948 941958 HEY2 JASPAR yes 118213456
chr1 941951 941962 ELK4 JASPAR yes 118213457
chr1 941951 941964 ELF3 JASPAR yes 118213458
chr1 941952 941963 ELF5 JASPAR yes 118213459
chr1 941952 941963 ETV2 JASPAR yes 118213460
chr1 941952 941963 SPDEF JASPAR yes 118213461
chr1 941952 941964 EHF JASPAR yes 118213462
chr1 941952 941964 ELF1 JASPAR yes 118213463
chr1 941952 941964 ELF4 JASPAR yes 118213464
chr1 941954 941960 ETS1 JASPAR yes 118213465
chr1 941954 941964 ELK1 JASPAR yes 118213466
chr1 941959 941976 RXRA JASPAR yes 118213467
chr1 941960 941964 ESR1 TRANSFAC yes 118213468
chr1 941960 941979 CTCF JASPAR yes 118213469
chr1 941965 941974 ELK4 JASPAR yes 118213470
chr1 941971 941985 PLAG1 JASPAR yes 118213471
chr1 941973 941988 TFAP2A JASPAR yes 118213472
chr1 941996 942008 IRF1 JASPAR yes 118213473
chr1 942011 942031 PPARG JASPAR yes 118213474
chr1 942030 942040 RELA JASPAR yes 118213475
chr1 942030 942040 REL JASPAR yes 118213476
chr1 942030 942041 NFKB1 JASPAR yes 118213477
chr1 942031 942041 NFKB1 JASPAR yes 118213478
chr1 942031 942041 RELA JASPAR yes 118213479
chr1 942031 942042 NFKB1 JASPAR yes 118213480
chr1 942036 942056 ESR1 JASPAR yes 118213481
chr1 942049 942053 NFE TRANSFAC yes 118213482
chr1 942075 942086 NFE2L2 JASPAR yes 118213483
chr1 942080 942097 RARA JASPAR yes 118213484
chr1 942087 942100 NR2F1 JASPAR yes 118213485
chr1 942089 942100 ESRRA JASPAR yes 118213486
chr1 942090 942098 NR4A2 JASPAR yes 118213487
chr1 942090 942105 HNF4A JASPAR yes 118213488
chr1 942091 942105 NR2F1 JASPAR yes 118213489
chr1 942091 942105 RXRB JASPAR yes 118213490
chr1 942091 942105 RXRG JASPAR yes 118213491
chr1 942091 942106 HNF4G JASPAR yes 118213492
chr1 942091 942106 NR2C2 JASPAR yes 118213493
chr1 942103 942118 HNF4G JASPAR yes 118213494
chr1 942104 942119 HNF4A JASPAR yes 118213495
chr1 942104 942119 RUNX2 JASPAR yes 118213496
chr1 942105 942108 MYB TRANSFAC yes 118213497
chr1 942114 942124 CLOCK JASPAR yes 118213498
chr1 942114 942124 HEY1 JASPAR yes 118213499
chr1 942114 942124 HEY2 JASPAR yes 118213500
chr1 942114 942124 MNT JASPAR yes 118213501
chr1 942115 942122 USF1 JASPAR yes 118213502
chr1 942115 942125 MAX JASPAR yes 118213503
chr1 942116 942121 MYC TRANSFAC yes 118213504
chr1 942116 942121 USF1 TRANSFAC yes 118213505
chr1 942116 942121 USF2 TRANSFAC yes 118213506
SNP sites on vista10[chr1:941791-942135]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 941795 rs145588482 TGGCAGCTC T no 1900
chr1 941898 rs188498461 C T
ATF1 FOXO3
1901
chr1 941927 rs550822588 C A,T
RARA SP1
1902
chr1 941954 rs376518027 G A,T
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK4 ETS1 ETV2 HEY2 SPDEF
1903
chr1 942030 rs114204204 G A
NFKB1 PPARG REL RELA
1904
chr1 942043 rs534397288 G A
ESR1
1905
chr1 942135 rs545110335 A G no 1906
Genes possibly regulated by vista10[chr1:941791-942135]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 18469
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 24654
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 52898
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 54176
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 60086
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 75706
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 93761
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 93332
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 86632
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 32448
Expression level of Genes
Back to top
miRNAs possibly regulated by vista10[chr1:941791-942135]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results