EnhancerDB
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  3. vista1003[chr1:28813874-28814267]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1003[chr1:28813874-28814267]
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Tissue distribution of vista1003
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Transcription factor that possibly regulate vista1003[chr1:28813874-28814267]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28813875 28813881 TBP TRANSFAC yes 118262987
chr1 28813875 28813890 FOXP1 JASPAR yes 118262988
chr1 28813875 28813896 IRF1 JASPAR yes 118262989
chr1 28813877 28813889 FOXC2 JASPAR yes 118262990
chr1 28813878 28813892 IRF7 JASPAR yes 118262991
chr1 28813880 28813892 IRF1 JASPAR yes 118262992
chr1 28813881 28813896 FOXP1 JASPAR yes 118262993
chr1 28813881 28813896 MEF2C JASPAR yes 118262994
chr1 28813881 28813902 IRF1 JASPAR yes 118262995
chr1 28813882 28813897 MEF2A JASPAR yes 118262996
chr1 28813883 28813895 FOXC2 JASPAR yes 118262997
chr1 28813883 28813895 MEF2A JASPAR yes 118262998
chr1 28813883 28813895 MEF2B JASPAR yes 118262999
chr1 28813883 28813895 MEF2D JASPAR yes 118263000
chr1 28813884 28813894 MEF2A JASPAR yes 118263001
chr1 28813886 28813907 IRF1 JASPAR yes 118263002
chr1 28813889 28813903 IRF7 JASPAR yes 118263003
chr1 28813892 28813907 MEF2C JASPAR yes 118263004
chr1 28813893 28813908 MEF2A JASPAR yes 118263005
chr1 28813894 28813906 FOXC2 JASPAR yes 118263006
chr1 28813894 28813906 MEF2A JASPAR yes 118263007
chr1 28813894 28813906 MEF2B JASPAR yes 118263008
chr1 28813894 28813906 MEF2D JASPAR yes 118263009
chr1 28813895 28813905 MEF2A JASPAR yes 118263010
chr1 28813896 28813910 FOXF2 JASPAR yes 118263011
chr1 28813896 28813910 ONECUT2 JASPAR yes 118263012
chr1 28813896 28813910 ONECUT3 JASPAR yes 118263013
chr1 28813896 28813911 FOXP1 JASPAR yes 118263014
chr1 28813897 28813912 FOXA1 JASPAR yes 118263015
chr1 28813898 28813909 FOXB1 JASPAR yes 118263016
chr1 28813898 28813909 FOXC1 JASPAR yes 118263017
chr1 28813898 28813910 FOXC2 JASPAR yes 118263018
chr1 28813899 28813911 FOXI1 JASPAR yes 118263019
chr1 28813900 28813914 ONECUT2 JASPAR yes 118263020
chr1 28813900 28813914 ONECUT3 JASPAR yes 118263021
chr1 28813900 28813915 FOXP1 JASPAR yes 118263022
chr1 28813900 28813915 HNF1A JASPAR yes 118263023
chr1 28813901 28813915 POU4F1 JASPAR yes 118263024
chr1 28813901 28813916 FOXA1 JASPAR yes 118263025
chr1 28813902 28813913 FOXB1 JASPAR yes 118263026
chr1 28813902 28813913 FOXC1 JASPAR yes 118263027
chr1 28813902 28813913 PROP1 JASPAR yes 118263028
chr1 28813902 28813914 FOXC2 JASPAR yes 118263029
chr1 28813903 28813915 FOXI1 JASPAR yes 118263030
chr1 28813940 28813944 YY1 TRANSFAC yes 118263031
chr1 28813986 28814001 HNF4A JASPAR yes 118263032
chr1 28814000 28814015 AR JASPAR yes 118263033
chr1 28814021 28814041 RREB1 JASPAR yes 118263034
chr1 28814022 28814042 RREB1 JASPAR yes 118263035
chr1 28814024 28814044 RREB1 JASPAR yes 118263036
chr1 28814026 28814046 RREB1 JASPAR yes 118263037
chr1 28814026 28814047 IRF1 JASPAR yes 118263038
chr1 28814027 28814042 FOXP1 JASPAR yes 118263039
chr1 28814028 28814043 FOXP1 JASPAR yes 118263040
chr1 28814028 28814049 IRF1 JASPAR yes 118263041
chr1 28814029 28814044 FOXP1 JASPAR yes 118263042
chr1 28814029 28814050 IRF1 JASPAR yes 118263043
chr1 28814030 28814045 FOXP1 JASPAR yes 118263044
chr1 28814030 28814051 IRF1 JASPAR yes 118263045
chr1 28814031 28814046 FOXP1 JASPAR yes 118263046
chr1 28814031 28814052 IRF1 JASPAR yes 118263047
chr1 28814032 28814047 FOXP1 JASPAR yes 118263048
chr1 28814032 28814053 IRF1 JASPAR yes 118263049
chr1 28814033 28814048 FOXP1 JASPAR yes 118263050
chr1 28814033 28814054 IRF1 JASPAR yes 118263051
chr1 28814034 28814049 FOXP1 JASPAR yes 118263052
chr1 28814034 28814055 IRF1 JASPAR yes 118263053
chr1 28814035 28814050 FOXP1 JASPAR yes 118263054
chr1 28814036 28814051 FOXP1 JASPAR yes 118263055
chr1 28814038 28814059 IRF1 JASPAR yes 118263056
chr1 28814042 28814056 SPI1 JASPAR yes 118263057
chr1 28814042 28814056 SPIC JASPAR yes 118263058
chr1 28814047 28814052 ETS2 TRANSFAC yes 118263059
chr1 28814047 28814055 EHF JASPAR yes 118263060
chr1 28814048 28814066 NR3C1 JASPAR yes 118263061
chr1 28814088 28814103 AR JASPAR yes 118263062
chr1 28814098 28814103 ETS2 TRANSFAC yes 118263063
chr1 28814127 28814138 CEBPA JASPAR yes 118263064
chr1 28814142 28814152 POU6F2 JASPAR yes 118263065
chr1 28814143 28814153 ALX3 JASPAR yes 118263066
chr1 28814143 28814153 EMX1 JASPAR yes 118263067
chr1 28814143 28814153 EMX2 JASPAR yes 118263068
chr1 28814143 28814153 EN2 JASPAR yes 118263069
chr1 28814143 28814153 ESX1 JASPAR yes 118263070
chr1 28814143 28814153 EVX1 JASPAR yes 118263071
chr1 28814143 28814153 EVX2 JASPAR yes 118263072
chr1 28814143 28814153 GBX1 JASPAR yes 118263073
chr1 28814143 28814153 GBX2 JASPAR yes 118263074
chr1 28814143 28814153 GSX1 JASPAR yes 118263075
chr1 28814143 28814153 HESX1 JASPAR yes 118263076
chr1 28814143 28814153 HOXA2 JASPAR yes 118263077
chr1 28814143 28814153 HOXB2 JASPAR yes 118263078
chr1 28814143 28814153 HOXB3 JASPAR yes 118263079
chr1 28814143 28814153 LBX2 JASPAR yes 118263080
chr1 28814143 28814153 LHX2 JASPAR yes 118263081
chr1 28814143 28814153 LHX6 JASPAR yes 118263082
chr1 28814143 28814153 MEOX1 JASPAR yes 118263083
chr1 28814143 28814153 MEOX2 JASPAR yes 118263084
chr1 28814143 28814153 MIXL1 JASPAR yes 118263085
chr1 28814143 28814153 NOTO JASPAR yes 118263086
chr1 28814143 28814153 POU6F1 JASPAR yes 118263087
chr1 28814143 28814153 RAX JASPAR yes 118263088
chr1 28814144 28814152 EN1 JASPAR yes 118263089
chr1 28814144 28814152 ISX JASPAR yes 118263090
chr1 28814144 28814152 LBX1 JASPAR yes 118263091
chr1 28814144 28814152 LHX9 JASPAR yes 118263092
chr1 28814144 28814152 PAX4 JASPAR yes 118263093
chr1 28814144 28814152 PDX1 JASPAR yes 118263094
chr1 28814144 28814152 PRRX1 JASPAR yes 118263095
chr1 28814144 28814152 RAX2 JASPAR yes 118263096
chr1 28814144 28814152 SHOX JASPAR yes 118263097
chr1 28814144 28814152 UNCX JASPAR yes 118263098
chr1 28814144 28814152 VAX1 JASPAR yes 118263099
chr1 28814144 28814152 VAX2 JASPAR yes 118263100
chr1 28814144 28814152 VSX1 JASPAR yes 118263101
chr1 28814144 28814152 VSX2 JASPAR yes 118263102
chr1 28814160 28814164 NFE TRANSFAC yes 118263103
chr1 28814169 28814190 IRF1 JASPAR yes 118263104
chr1 28814172 28814176 TEAD2 TRANSFAC yes 118263105
chr1 28814172 28814177 TBP TRANSFAC yes 118263106
chr1 28814172 28814178 TMF TRANSFAC yes 118263107
chr1 28814173 28814188 PRDM1 JASPAR yes 118263108
chr1 28814173 28814188 STAT2 JASPAR yes 118263109
chr1 28814186 28814201 HNF1A JASPAR yes 118263110
chr1 28814187 28814193 HiNF-A TRANSFAC yes 118263111
chr1 28814188 28814199 BATF JASPAR yes 118263112
chr1 28814196 28814199 MYB TRANSFAC yes 118263113
chr1 28814196 28814211 STAT2 JASPAR yes 118263114
chr1 28814197 28814211 SPIC JASPAR yes 118263115
chr1 28814205 28814210 H4TF1 TRANSFAC yes 118263116
chr1 28814227 28814247 RREB1 JASPAR yes 118263117
chr1 28814231 28814237 TCF4 TRANSFAC yes 118263118
chr1 28814232 28814244 FOXC2 JASPAR yes 118263119
chr1 28814233 28814254 IRF1 JASPAR yes 118263120
chr1 28814234 28814249 FOXP1 JASPAR yes 118263121
chr1 28814234 28814255 IRF1 JASPAR yes 118263122
chr1 28814235 28814256 IRF1 JASPAR yes 118263123
chr1 28814236 28814251 FOXP1 JASPAR yes 118263124
chr1 28814236 28814257 IRF1 JASPAR yes 118263125
chr1 28814237 28814258 IRF1 JASPAR yes 118263126
chr1 28814238 28814253 FOXP1 JASPAR yes 118263127
chr1 28814238 28814259 IRF1 JASPAR yes 118263128
chr1 28814239 28814254 FOXP1 JASPAR yes 118263129
chr1 28814239 28814260 IRF1 JASPAR yes 118263130
chr1 28814240 28814255 FOXP1 JASPAR yes 118263131
chr1 28814240 28814261 IRF1 JASPAR yes 118263132
chr1 28814241 28814256 FOXP1 JASPAR yes 118263133
chr1 28814241 28814262 IRF1 JASPAR yes 118263134
chr1 28814242 28814257 FOXP1 JASPAR yes 118263135
chr1 28814242 28814263 IRF1 JASPAR yes 118263136
chr1 28814243 28814258 FOXP1 JASPAR yes 118263137
chr1 28814243 28814264 IRF1 JASPAR yes 118263138
chr1 28814244 28814259 FOXP1 JASPAR yes 118263139
chr1 28814244 28814265 IRF1 JASPAR yes 118263140
chr1 28814245 28814260 FOXP1 JASPAR yes 118263141
chr1 28814245 28814266 IRF1 JASPAR yes 118263142
chr1 28814246 28814261 FOXP1 JASPAR yes 118263143
chr1 28814247 28814262 FOXP1 JASPAR yes 118263144
chr1 28814248 28814263 FOXP1 JASPAR yes 118263145
chr1 28814249 28814264 FOXP1 JASPAR yes 118263146
chr1 28814250 28814265 FOXP1 JASPAR yes 118263147
chr1 28814251 28814266 FOXP1 JASPAR yes 118263148
chr1 28814252 28814267 FOXP1 JASPAR yes 118263149
SNP sites on vista1003[chr1:28813874-28814267]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28813922 rs10915199 A G no 192781
chr1 28814210 rs78035299 T C
H4TF1 SPIC STAT2
192782
Genes possibly regulated by vista1003[chr1:28813874-28814267]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28832455 28865812 + RCC1 ENSG00000180198.11 28832455 0.78 1.0 413 81812
chr1 28879597 28905051 + TRNAU1AP ENSG00000180098.5 28879597 0.71 1.0 414 34670
Expression level of Genes
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miRNAs possibly regulated by vista1003[chr1:28813874-28814267]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results