EnhancerDB
  1. Home
  2. Enhancers
  3. vista1006[chr1:29104880-29105053]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1006[chr1:29104880-29105053]
Back to top
Tissue distribution of vista1006
Back to top
Transcription factor that possibly regulate vista1006[chr1:29104880-29105053]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29104947 29104968 ZNF263 JASPAR yes 118263247
chr1 29104958 29104968 SP1 JASPAR yes 118263248
chr1 29104970 29104974 NFE TRANSFAC yes 118263249
chr1 29104970 29104975 GATA1 TRANSFAC yes 118263250
chr1 29104970 29104976 GATA3 JASPAR yes 118263251
chr1 29104974 29104989 FOXP1 JASPAR yes 118263252
chr1 29104980 29104987 NKX3-1 JASPAR yes 118263253
chr1 29104981 29104989 FOXC1 JASPAR yes 118263254
chr1 29104989 29105004 SOX21 JASPAR yes 118263255
chr1 29105007 29105016 PITX3 JASPAR yes 118263256
chr1 29105007 29105017 GSC2 JASPAR yes 118263257
chr1 29105007 29105017 GSC JASPAR yes 118263258
chr1 29105008 29105016 RHOXF1 JASPAR yes 118263259
chr1 29105016 29105024 EHF JASPAR yes 118263260
chr1 29105020 29105030 EMX1 JASPAR yes 118263261
chr1 29105020 29105030 EMX2 JASPAR yes 118263262
chr1 29105020 29105030 EN2 JASPAR yes 118263263
chr1 29105020 29105030 ESX1 JASPAR yes 118263264
chr1 29105020 29105030 EVX1 JASPAR yes 118263265
chr1 29105020 29105030 EVX2 JASPAR yes 118263266
chr1 29105020 29105030 GBX1 JASPAR yes 118263267
chr1 29105020 29105030 GBX2 JASPAR yes 118263268
chr1 29105020 29105030 GSX1 JASPAR yes 118263269
chr1 29105020 29105030 GSX2 JASPAR yes 118263270
chr1 29105020 29105030 HESX1 JASPAR yes 118263271
chr1 29105020 29105030 HOXA2 JASPAR yes 118263272
chr1 29105020 29105030 HOXB2 JASPAR yes 118263273
chr1 29105020 29105030 HOXB3 JASPAR yes 118263274
chr1 29105020 29105030 LBX2 JASPAR yes 118263275
chr1 29105020 29105030 LHX2 JASPAR yes 118263276
chr1 29105020 29105030 LHX6 JASPAR yes 118263277
chr1 29105020 29105030 MEOX1 JASPAR yes 118263278
chr1 29105020 29105030 MEOX2 JASPAR yes 118263279
chr1 29105020 29105030 MIXL1 JASPAR yes 118263280
chr1 29105020 29105030 NOTO JASPAR yes 118263281
chr1 29105020 29105030 POU6F1 JASPAR yes 118263282
chr1 29105021 29105029 EN1 JASPAR yes 118263283
chr1 29105021 29105029 ISX JASPAR yes 118263284
chr1 29105021 29105029 LBX1 JASPAR yes 118263285
chr1 29105021 29105029 LHX9 JASPAR yes 118263286
chr1 29105021 29105029 PAX4 JASPAR yes 118263287
chr1 29105021 29105029 PDX1 JASPAR yes 118263288
chr1 29105021 29105029 PRRX1 JASPAR yes 118263289
chr1 29105021 29105029 RAX2 JASPAR yes 118263290
chr1 29105021 29105029 SHOX JASPAR yes 118263291
chr1 29105021 29105029 UNCX JASPAR yes 118263292
chr1 29105021 29105029 VAX1 JASPAR yes 118263293
chr1 29105021 29105029 VAX2 JASPAR yes 118263294
chr1 29105021 29105029 VSX1 JASPAR yes 118263295
chr1 29105021 29105029 VSX2 JASPAR yes 118263296
SNP sites on vista1006[chr1:29104880-29105053]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29104969 rs139070848 G A no 194101
chr1 29104979 rs534310189 CTT C
FOXP1
194102
Genes possibly regulated by vista1006[chr1:29104880-29105053]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29063133 29096287 + YTHDF2 ENSG00000198492.10 29063133 0.66 1.0 418 58253
chr1 29138654 29190208 + OPRD1 ENSG00000116329.6 29138654 0.98 0.83 419 66399
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1006[chr1:29104880-29105053]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 218765236 218765256 - hsa-miR-6809-3p MIMAT0027519 218808792 0.00031118717908822156 0.0 0.0 1008
Expression level of miRNAs
Back to top