EnhancerDB
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  3. vista1008[chr1:29140536-29140683]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1008[chr1:29140536-29140683]
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Tissue distribution of vista1008
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Transcription factor that possibly regulate vista1008[chr1:29140536-29140683]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29140542 29140557 HNF4A JASPAR yes 27785800
chr1 29140542 29140557 HNF4A JASPAR yes 118263334
chr1 29140543 29140558 HNF4G JASPAR yes 27785801
chr1 29140543 29140558 HNF4G JASPAR yes 118263335
chr1 29140547 29140553 TCF4 TRANSFAC yes 27785802
chr1 29140547 29140553 TCF4 TRANSFAC yes 118263336
chr1 29140568 29140573 SP1 TRANSFAC yes 27785803
chr1 29140568 29140573 SP1 TRANSFAC yes 118263337
chr1 29140579 29140590 FLI1 JASPAR yes 27785804
chr1 29140579 29140590 FLI1 JASPAR yes 118263338
chr1 29140580 29140590 ERF JASPAR yes 27785805
chr1 29140580 29140590 ERG JASPAR yes 27785806
chr1 29140580 29140590 ETS1 JASPAR yes 27785807
chr1 29140580 29140590 FLI1 JASPAR yes 27785808
chr1 29140580 29140590 ERF JASPAR yes 118263339
chr1 29140580 29140590 ERG JASPAR yes 118263340
chr1 29140580 29140590 ETS1 JASPAR yes 118263341
chr1 29140580 29140590 FLI1 JASPAR yes 118263342
chr1 29140580 29140591 ETV2 JASPAR yes 27785809
chr1 29140580 29140591 ETV2 JASPAR yes 118263343
chr1 29140581 29140589 FEV JASPAR yes 27785810
chr1 29140581 29140589 FEV JASPAR yes 118263344
chr1 29140589 29140606 BCL6B JASPAR yes 27785811
chr1 29140589 29140606 BCL6B JASPAR yes 118263345
chr1 29140595 29140606 FOSL2 JASPAR yes 27785812
chr1 29140595 29140606 JUNB JASPAR yes 27785813
chr1 29140595 29140606 FOSL2 JASPAR yes 118263346
chr1 29140595 29140606 JUNB JASPAR yes 118263347
chr1 29140596 29140607 FOS JASPAR yes 27785814
chr1 29140596 29140607 FOSL1 JASPAR yes 27785815
chr1 29140596 29140607 JUND JASPAR yes 27785816
chr1 29140596 29140607 NFE2 JASPAR yes 27785817
chr1 29140596 29140607 FOS JASPAR yes 118263348
chr1 29140596 29140607 FOSL1 JASPAR yes 118263349
chr1 29140596 29140607 JUND JASPAR yes 118263350
chr1 29140596 29140607 NFE2 JASPAR yes 118263351
chr1 29140597 29140606 JDP2 JASPAR yes 27785818
chr1 29140597 29140606 JDP2 JASPAR yes 118263352
chr1 29140597 29140608 FOSL2 JASPAR yes 27785819
chr1 29140597 29140608 JUNB JASPAR yes 27785820
chr1 29140597 29140608 FOSL2 JASPAR yes 118263353
chr1 29140597 29140608 JUNB JASPAR yes 118263354
chr1 29140597 29140611 JUN JASPAR yes 27785821
chr1 29140597 29140611 JUN JASPAR yes 118263355
chr1 29140598 29140609 BATF JASPAR yes 27785822
chr1 29140598 29140609 BATF JASPAR yes 118263356
chr1 29140619 29140632 NFKB2 JASPAR yes 27785823
chr1 29140619 29140632 NFKB2 JASPAR yes 118263357
chr1 29140620 29140631 NFKB1 JASPAR yes 27785824
chr1 29140620 29140631 NFKB1 JASPAR yes 118263358
chr1 29140621 29140631 NFKB1 JASPAR yes 27785825
chr1 29140621 29140631 NFKB1 JASPAR yes 118263359
chr1 29140622 29140639 BCL6B JASPAR yes 27785826
chr1 29140622 29140639 BCL6B JASPAR yes 118263360
chr1 29140625 29140637 E2F8 JASPAR yes 27785827
chr1 29140625 29140637 E2F8 JASPAR yes 118263361
chr1 29140640 29140645 SP1 TRANSFAC yes 27785828
chr1 29140640 29140645 SP1 TRANSFAC yes 118263362
chr1 29140641 29140646 SP1 TRANSFAC yes 27785829
chr1 29140641 29140646 SP1 TRANSFAC yes 118263363
chr1 29140658 29140664 SOX10 JASPAR yes 27785830
chr1 29140658 29140664 SOX10 JASPAR yes 118263364
chr1 29140666 29140672 SOX10 JASPAR yes 27785831
chr1 29140666 29140672 SOX10 JASPAR yes 118263365
chr1 29140677 29140693 GLIS1 JASPAR yes 27785832
chr1 29140677 29140693 GLIS1 JASPAR yes 118263366
chr1 29140681 29140687 MZF1 JASPAR yes 27785833
chr1 29140681 29140687 MZF1 JASPAR yes 118263367
SNP sites on vista1008[chr1:29140536-29140683]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29140634 rs34346748 C A
BCL6B E2F8
194254
chr1 29140636 rs117433243 A G
BCL6B E2F8
194255
chr1 29140658 rs111835690 A G
SOX10
194256
Genes possibly regulated by vista1008[chr1:29140536-29140683]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29063133 29096287 + YTHDF2 ENSG00000198492.10 29063133 0.66 1.0 418 22597
chr1 29138654 29190208 + OPRD1 ENSG00000116329.6 29138654 0.98 0.83 419 98118
chr1 29213603 29446553 + EPB41 ENSG00000159023.14 29213603 0.87 0.99 420 27080
Expression level of Genes
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miRNAs possibly regulated by vista1008[chr1:29140536-29140683]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results