EnhancerDB
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  3. vista1013[chr1:29253461-29253677]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1013[chr1:29253461-29253677]
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Tissue distribution of vista1013
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Transcription factor that possibly regulate vista1013[chr1:29253461-29253677]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29253447 29253461 PAX6 JASPAR yes 27790445
chr1 29253447 29253461 PAX6 JASPAR yes 118263463
chr1 29253478 29253482 YY1 TRANSFAC yes 27790446
chr1 29253478 29253482 YY1 TRANSFAC yes 118263464
chr1 29253507 29253518 ELK4 JASPAR yes 27790447
chr1 29253507 29253518 FLI1 JASPAR yes 27790448
chr1 29253507 29253518 ELK4 JASPAR yes 118263465
chr1 29253507 29253518 FLI1 JASPAR yes 118263466
chr1 29253507 29253520 ELF3 JASPAR yes 27790449
chr1 29253507 29253520 ELF3 JASPAR yes 118263467
chr1 29253508 29253512 YY1 TRANSFAC yes 27790450
chr1 29253508 29253512 YY1 TRANSFAC yes 118263468
chr1 29253508 29253518 ELK1 JASPAR yes 27790451
chr1 29253508 29253518 ELK3 JASPAR yes 27790452
chr1 29253508 29253518 ERF JASPAR yes 27790453
chr1 29253508 29253518 ERG JASPAR yes 27790454
chr1 29253508 29253518 ETS1 JASPAR yes 27790455
chr1 29253508 29253518 ETV1 JASPAR yes 27790456
chr1 29253508 29253518 ETV3 JASPAR yes 27790457
chr1 29253508 29253518 ETV4 JASPAR yes 27790458
chr1 29253508 29253518 ETV5 JASPAR yes 27790459
chr1 29253508 29253518 ETV6 JASPAR yes 27790460
chr1 29253508 29253518 FEV JASPAR yes 27790461
chr1 29253508 29253518 FLI1 JASPAR yes 27790462
chr1 29253508 29253518 ELK1 JASPAR yes 118263469
chr1 29253508 29253518 ELK3 JASPAR yes 118263470
chr1 29253508 29253518 ERF JASPAR yes 118263471
chr1 29253508 29253518 ERG JASPAR yes 118263472
chr1 29253508 29253518 ETS1 JASPAR yes 118263473
chr1 29253508 29253518 ETV1 JASPAR yes 118263474
chr1 29253508 29253518 ETV3 JASPAR yes 118263475
chr1 29253508 29253518 ETV4 JASPAR yes 118263476
chr1 29253508 29253518 ETV5 JASPAR yes 118263477
chr1 29253508 29253518 ETV6 JASPAR yes 118263478
chr1 29253508 29253518 FEV JASPAR yes 118263479
chr1 29253508 29253518 FLI1 JASPAR yes 118263480
chr1 29253508 29253519 ELF5 JASPAR yes 27790463
chr1 29253508 29253519 ETV2 JASPAR yes 27790464
chr1 29253508 29253519 SPDEF JASPAR yes 27790465
chr1 29253508 29253519 ELF5 JASPAR yes 118263481
chr1 29253508 29253519 ETV2 JASPAR yes 118263482
chr1 29253508 29253519 SPDEF JASPAR yes 118263483
chr1 29253508 29253520 EHF JASPAR yes 27790466
chr1 29253508 29253520 ELF1 JASPAR yes 27790467
chr1 29253508 29253520 ELF4 JASPAR yes 27790468
chr1 29253508 29253520 EHF JASPAR yes 118263484
chr1 29253508 29253520 ELF1 JASPAR yes 118263485
chr1 29253508 29253520 ELF4 JASPAR yes 118263486
chr1 29253509 29253517 FEV JASPAR yes 27790469
chr1 29253509 29253517 FEV JASPAR yes 118263487
chr1 29253509 29253518 ELK4 JASPAR yes 27790470
chr1 29253509 29253518 ELK4 JASPAR yes 118263488
chr1 29253510 29253516 ETS1 JASPAR yes 27790471
chr1 29253510 29253516 ETS1 JASPAR yes 118263489
chr1 29253510 29253520 ELK1 JASPAR yes 27790472
chr1 29253510 29253520 ELK1 JASPAR yes 118263490
chr1 29253530 29253541 USF1 JASPAR yes 27790473
chr1 29253530 29253541 USF1 JASPAR yes 118263491
chr1 29253531 29253541 TFE3 JASPAR yes 27790474
chr1 29253531 29253541 TFEB JASPAR yes 27790475
chr1 29253531 29253541 TFEC JASPAR yes 27790476
chr1 29253531 29253541 TFE3 JASPAR yes 118263492
chr1 29253531 29253541 TFEB JASPAR yes 118263493
chr1 29253531 29253541 TFEC JASPAR yes 118263494
chr1 29253531 29253542 USF2 JASPAR yes 27790477
chr1 29253531 29253542 USF2 JASPAR yes 118263495
chr1 29253532 29253542 MAX JASPAR yes 27790478
chr1 29253532 29253542 MAX JASPAR yes 118263496
chr1 29253549 29253558 SOX9 JASPAR yes 27790479
chr1 29253549 29253558 SOX9 JASPAR yes 118263497
chr1 29253554 29253569 LEF1 JASPAR yes 27790480
chr1 29253554 29253569 LEF1 JASPAR yes 118263498
chr1 29253555 29253569 TCF7L2 JASPAR yes 27790481
chr1 29253555 29253569 TCF7L2 JASPAR yes 118263499
chr1 29253559 29253567 GATA3 JASPAR yes 27790482
chr1 29253559 29253567 GATA3 JASPAR yes 118263500
chr1 29253570 29253591 IRF1 JASPAR yes 27790483
chr1 29253570 29253591 IRF1 JASPAR yes 118263501
chr1 29253580 29253594 FOXF2 JASPAR yes 27790484
chr1 29253580 29253594 FOXF2 JASPAR yes 118263502
chr1 29253581 29253592 FOXA1 JASPAR yes 27790485
chr1 29253581 29253592 FOXA1 JASPAR yes 118263503
chr1 29253581 29253596 FOXA1 JASPAR yes 27790486
chr1 29253581 29253596 FOXA1 JASPAR yes 118263504
chr1 29253582 29253593 FOXB1 JASPAR yes 27790487
chr1 29253582 29253593 FOXC1 JASPAR yes 27790488
chr1 29253582 29253593 FOXB1 JASPAR yes 118263505
chr1 29253582 29253593 FOXC1 JASPAR yes 118263506
chr1 29253582 29253594 FOXC2 JASPAR yes 27790489
chr1 29253582 29253594 FOXC2 JASPAR yes 118263507
chr1 29253583 29253594 FOXP2 JASPAR yes 27790490
chr1 29253583 29253594 FOXP2 JASPAR yes 118263508
chr1 29253585 29253592 FOXD2 JASPAR yes 27790491
chr1 29253585 29253592 FOXI1 JASPAR yes 27790492
chr1 29253585 29253592 FOXL1 JASPAR yes 27790493
chr1 29253585 29253592 FOXO4 JASPAR yes 27790494
chr1 29253585 29253592 FOXO6 JASPAR yes 27790495
chr1 29253585 29253592 FOXP3 JASPAR yes 27790496
chr1 29253585 29253592 FOXD2 JASPAR yes 118263509
chr1 29253585 29253592 FOXI1 JASPAR yes 118263510
chr1 29253585 29253592 FOXL1 JASPAR yes 118263511
chr1 29253585 29253592 FOXO4 JASPAR yes 118263512
chr1 29253585 29253592 FOXO6 JASPAR yes 118263513
chr1 29253585 29253592 FOXP3 JASPAR yes 118263514
chr1 29253585 29253593 FOXD1 JASPAR yes 27790497
chr1 29253585 29253593 FOXG1 JASPAR yes 27790498
chr1 29253585 29253593 FOXO3 JASPAR yes 27790499
chr1 29253585 29253593 FOXD1 JASPAR yes 118263515
chr1 29253585 29253593 FOXG1 JASPAR yes 118263516
chr1 29253585 29253593 FOXO3 JASPAR yes 118263517
chr1 29253586 29253594 FOXL1 JASPAR yes 27790500
chr1 29253586 29253594 FOXL1 JASPAR yes 118263518
chr1 29253602 29253616 SPI1 JASPAR yes 27790501
chr1 29253602 29253616 SPIC JASPAR yes 27790502
chr1 29253602 29253616 SPI1 JASPAR yes 118263519
chr1 29253602 29253616 SPIC JASPAR yes 118263520
chr1 29253603 29253616 ELF1 JASPAR yes 27790503
chr1 29253603 29253616 ELF1 JASPAR yes 118263521
chr1 29253604 29253616 ELF4 JASPAR yes 27790504
chr1 29253604 29253616 ELF4 JASPAR yes 118263522
chr1 29253606 29253616 GABPA JASPAR yes 27790505
chr1 29253606 29253616 GABPA JASPAR yes 118263523
chr1 29253606 29253617 FLI1 JASPAR yes 27790506
chr1 29253606 29253617 FLI1 JASPAR yes 118263524
chr1 29253607 29253615 EHF JASPAR yes 27790507
chr1 29253607 29253615 EHF JASPAR yes 118263525
chr1 29253609 29253629 RREB1 JASPAR yes 27790508
chr1 29253609 29253629 RREB1 JASPAR yes 118263526
chr1 29253625 29253631 MAZ TRANSFAC yes 27790509
chr1 29253625 29253631 MAZ TRANSFAC yes 118263527
chr1 29253638 29253652 SPI1 JASPAR yes 27790510
chr1 29253638 29253652 SPI1 JASPAR yes 118263528
SNP sites on vista1013[chr1:29253461-29253677]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29253563 rs203283 T C
GATA3 LEF1 TCF7L2
194844
chr1 29253671 rs75916620 A G no 194845
Genes possibly regulated by vista1013[chr1:29253461-29253677]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29213603 29446553 + EPB41 ENSG00000159023.14 29213603 0.87 0.99 420 60142
Expression level of Genes
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miRNAs possibly regulated by vista1013[chr1:29253461-29253677]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results