EnhancerDB
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  3. vista1018[chr1:29513219-29513546]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1018[chr1:29513219-29513546]
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Tissue distribution of vista1018
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Transcription factor that possibly regulate vista1018[chr1:29513219-29513546]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29513232 29513247 ZBTB33 JASPAR yes 27806180
chr1 29513232 29513247 ZBTB33 JASPAR yes 118263756
chr1 29513262 29513276 ZIC1 JASPAR yes 27806181
chr1 29513262 29513276 ZIC1 JASPAR yes 118263757
chr1 29513262 29513277 SCRT1 JASPAR yes 27806182
chr1 29513262 29513277 ZIC3 JASPAR yes 27806183
chr1 29513262 29513277 ZIC4 JASPAR yes 27806184
chr1 29513262 29513277 SCRT1 JASPAR yes 118263758
chr1 29513262 29513277 ZIC3 JASPAR yes 118263759
chr1 29513262 29513277 ZIC4 JASPAR yes 118263760
chr1 29513264 29513273 SNAI2 JASPAR yes 27806185
chr1 29513264 29513273 SNAI2 JASPAR yes 118263761
chr1 29513264 29513277 SCRT2 JASPAR yes 27806186
chr1 29513264 29513277 SCRT2 JASPAR yes 118263762
chr1 29513265 29513270 USF2 TRANSFAC yes 27806187
chr1 29513265 29513270 USF2 TRANSFAC yes 118263763
chr1 29513291 29513295 NFE TRANSFAC yes 27806188
chr1 29513291 29513295 NFE TRANSFAC yes 118263764
chr1 29513302 29513320 SRF JASPAR yes 27806189
chr1 29513302 29513320 SRF JASPAR yes 118263765
chr1 29513304 29513320 SRF JASPAR yes 27806190
chr1 29513304 29513320 SRF JASPAR yes 118263766
chr1 29513304 29513322 SRF JASPAR yes 27806191
chr1 29513304 29513322 SRF JASPAR yes 118263767
chr1 29513315 29513319 ESR1 TRANSFAC yes 27806192
chr1 29513315 29513319 ESR1 TRANSFAC yes 118263768
chr1 29513346 29513360 ZIC1 JASPAR yes 27806193
chr1 29513346 29513360 ZIC1 JASPAR yes 118263769
chr1 29513407 29513416 NKX3-2 JASPAR yes 27806194
chr1 29513407 29513416 NKX3-2 JASPAR yes 118263770
chr1 29513412 29513426 BATF3 JASPAR yes 27806195
chr1 29513412 29513426 BATF3 JASPAR yes 118263771
chr1 29513418 29513422 YY1 TRANSFAC yes 27806196
chr1 29513418 29513422 YY1 TRANSFAC yes 118263772
chr1 29513419 29513439 TBX19 JASPAR yes 27806197
chr1 29513419 29513439 TBX19 JASPAR yes 118263773
chr1 29513421 29513424 MYB TRANSFAC yes 27806198
chr1 29513421 29513424 MYB TRANSFAC yes 118263774
chr1 29513437 29513445 FEV JASPAR yes 27806199
chr1 29513437 29513445 FEV JASPAR yes 118263775
chr1 29513442 29513457 STAT1 JASPAR yes 27806200
chr1 29513442 29513457 STAT1 JASPAR yes 118263776
chr1 29513444 29513455 STAT1 JASPAR yes 27806201
chr1 29513444 29513455 STAT1 JASPAR yes 118263777
chr1 29513453 29513468 LEF1 JASPAR yes 27806202
chr1 29513453 29513468 LEF1 JASPAR yes 118263778
chr1 29513455 29513470 FOXP1 JASPAR yes 27806203
chr1 29513455 29513470 FOXP1 JASPAR yes 118263779
chr1 29513455 29513476 IRF1 JASPAR yes 27806204
chr1 29513455 29513476 IRF1 JASPAR yes 118263780
chr1 29513459 29513473 IRF7 JASPAR yes 27806205
chr1 29513459 29513473 IRF8 JASPAR yes 27806206
chr1 29513459 29513473 IRF7 JASPAR yes 118263781
chr1 29513459 29513473 IRF8 JASPAR yes 118263782
chr1 29513473 29513484 TBX2 JASPAR yes 27806207
chr1 29513473 29513484 TBX2 JASPAR yes 118263783
chr1 29513475 29513484 NFIX JASPAR yes 27806208
chr1 29513475 29513484 NFIX JASPAR yes 118263784
chr1 29513477 29513483 NFIC JASPAR yes 27806209
chr1 29513477 29513483 NFIC JASPAR yes 118263785
chr1 29513479 29513483 H1TF2 TRANSFAC yes 27806210
chr1 29513479 29513483 NFE TRANSFAC yes 27806211
chr1 29513479 29513483 SRF TRANSFAC yes 27806212
chr1 29513479 29513483 H1TF2 TRANSFAC yes 118263786
chr1 29513479 29513483 NFE TRANSFAC yes 118263787
chr1 29513479 29513483 SRF TRANSFAC yes 118263788
chr1 29513517 29513521 NFE TRANSFAC yes 27806213
chr1 29513517 29513521 NFE TRANSFAC yes 118263789
chr1 29513521 29513532 STAT3 JASPAR yes 27806214
chr1 29513521 29513532 STAT3 JASPAR yes 118263790
chr1 29513524 29513536 TEAD1 JASPAR yes 27806215
chr1 29513524 29513536 TEAD1 JASPAR yes 118263791
chr1 29513526 29513536 TEAD1 JASPAR yes 27806216
chr1 29513526 29513536 TEAD4 JASPAR yes 27806217
chr1 29513526 29513536 TEAD1 JASPAR yes 118263792
chr1 29513526 29513536 TEAD4 JASPAR yes 118263793
chr1 29513527 29513535 TEAD3 JASPAR yes 27806218
chr1 29513527 29513535 TEAD3 JASPAR yes 118263794
SNP sites on vista1018[chr1:29513219-29513546]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29513323 rs12046213 G A no 196130
Genes possibly regulated by vista1018[chr1:29513219-29513546]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29445940 29450447 - TMEM200B ENSG00000253304.1 29450447 0.93 1.0 421 37228
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 95280
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 56092
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 50518
Expression level of Genes
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miRNAs possibly regulated by vista1018[chr1:29513219-29513546]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results