EnhancerDB
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  3. vista1019[chr1:29517304-29517322]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1019[chr1:29517304-29517322]
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Tissue distribution of vista1019
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Transcription factor that possibly regulate vista1019[chr1:29517304-29517322]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29517303 29517318 FOXP1 JASPAR yes 27806650
chr1 29517303 29517318 FOXP1 JASPAR yes 118263795
chr1 29517305 29517315 HOXB13 JASPAR yes 27806651
chr1 29517305 29517315 HOXB13 JASPAR yes 118263796
chr1 29517305 29517320 FOXP1 JASPAR yes 27806652
chr1 29517305 29517320 FOXP1 JASPAR yes 118263797
chr1 29517305 29517326 IRF1 JASPAR yes 27806653
chr1 29517305 29517326 IRF1 JASPAR yes 118263798
chr1 29517306 29517321 FOXP1 JASPAR yes 27806654
chr1 29517306 29517321 FOXP1 JASPAR yes 118263799
chr1 29517306 29517327 IRF1 JASPAR yes 27806655
chr1 29517306 29517327 IRF1 JASPAR yes 118263800
chr1 29517307 29517322 FOXP1 JASPAR yes 27806656
chr1 29517307 29517322 FOXP1 JASPAR yes 118263801
chr1 29517307 29517328 IRF1 JASPAR yes 27806657
chr1 29517307 29517328 IRF1 JASPAR yes 118263802
chr1 29517308 29517323 FOXP1 JASPAR yes 27806658
chr1 29517308 29517323 FOXP1 JASPAR yes 118263803
chr1 29517308 29517329 IRF1 JASPAR yes 27806659
chr1 29517308 29517329 IRF1 JASPAR yes 118263804
chr1 29517309 29517315 TBP TRANSFAC yes 27806660
chr1 29517309 29517315 TBP TRANSFAC yes 118263805
chr1 29517309 29517324 FOXP1 JASPAR yes 27806661
chr1 29517309 29517324 FOXP1 JASPAR yes 118263806
chr1 29517309 29517330 IRF1 JASPAR yes 27806662
chr1 29517309 29517330 IRF1 JASPAR yes 118263807
chr1 29517310 29517325 FOXP1 JASPAR yes 27806663
chr1 29517310 29517325 FOXP1 JASPAR yes 118263808
chr1 29517310 29517331 IRF1 JASPAR yes 27806664
chr1 29517310 29517331 IRF1 JASPAR yes 118263809
chr1 29517311 29517326 FOXP1 JASPAR yes 27806665
chr1 29517311 29517326 FOXP1 JASPAR yes 118263810
chr1 29517311 29517332 IRF1 JASPAR yes 27806666
chr1 29517311 29517332 IRF1 JASPAR yes 118263811
chr1 29517312 29517327 FOXP1 JASPAR yes 27806667
chr1 29517312 29517327 FOXP1 JASPAR yes 118263812
chr1 29517312 29517333 IRF1 JASPAR yes 27806668
chr1 29517312 29517333 IRF1 JASPAR yes 118263813
chr1 29517313 29517328 FOXP1 JASPAR yes 27806669
chr1 29517313 29517328 FOXP1 JASPAR yes 118263814
chr1 29517313 29517334 IRF1 JASPAR yes 27806670
chr1 29517313 29517334 IRF1 JASPAR yes 118263815
chr1 29517314 29517329 FOXP1 JASPAR yes 27806671
chr1 29517314 29517329 FOXP1 JASPAR yes 118263816
chr1 29517314 29517335 IRF1 JASPAR yes 27806672
chr1 29517314 29517335 IRF1 JASPAR yes 118263817
chr1 29517315 29517330 FOXP1 JASPAR yes 27806673
chr1 29517315 29517330 FOXP1 JASPAR yes 118263818
chr1 29517315 29517336 IRF1 JASPAR yes 27806674
chr1 29517315 29517336 IRF1 JASPAR yes 118263819
chr1 29517316 29517331 FOXP1 JASPAR yes 27806675
chr1 29517316 29517331 FOXP1 JASPAR yes 118263820
chr1 29517318 29517333 FOXP1 JASPAR yes 27806676
chr1 29517318 29517333 FOXP1 JASPAR yes 118263821
SNP sites on vista1019[chr1:29517304-29517322]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1019[chr1:29517304-29517322]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29445940 29450447 - TMEM200B ENSG00000253304.1 29450447 0.93 1.0 421 33143
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 91195
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 59868
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 54294
Expression level of Genes
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miRNAs possibly regulated by vista1019[chr1:29517304-29517322]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results