EnhancerDB
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  3. vista1022[chr1:29565515-29565732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1022[chr1:29565515-29565732]
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Tissue distribution of vista1022
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Transcription factor that possibly regulate vista1022[chr1:29565515-29565732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802678
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802679
chr1 29565545 29565551 TCF4 TRANSFAC yes 27808277
chr1 29565545 29565551 TCF4 TRANSFAC yes 118263967
chr1 29565549 29565561 INSM1 JASPAR yes 27808278
chr1 29565549 29565561 INSM1 JASPAR yes 118263968
chr1 29565587 29565597 TBX21 JASPAR yes 27808279
chr1 29565587 29565597 TBX21 JASPAR yes 118263969
chr1 29565587 29565598 TBX20 JASPAR yes 27808280
chr1 29565587 29565598 TBX2 JASPAR yes 27808281
chr1 29565587 29565598 TBX20 JASPAR yes 118263970
chr1 29565587 29565598 TBX2 JASPAR yes 118263971
chr1 29565587 29565600 EOMES JASPAR yes 27808282
chr1 29565587 29565600 EOMES JASPAR yes 118263972
chr1 29565588 29565596 TBX15 JASPAR yes 27808283
chr1 29565588 29565596 TBX1 JASPAR yes 27808284
chr1 29565588 29565596 TBX4 JASPAR yes 27808285
chr1 29565588 29565596 TBX5 JASPAR yes 27808286
chr1 29565588 29565596 TBX15 JASPAR yes 118263973
chr1 29565588 29565596 TBX1 JASPAR yes 118263974
chr1 29565588 29565596 TBX4 JASPAR yes 118263975
chr1 29565588 29565596 TBX5 JASPAR yes 118263976
chr1 29565588 29565598 TBR1 JASPAR yes 27808287
chr1 29565588 29565598 TBR1 JASPAR yes 118263977
chr1 29565627 29565640 SMAD2 JASPAR yes 27808288
chr1 29565627 29565640 SMAD2 JASPAR yes 118263978
chr1 29565638 29565648 SREBF1 JASPAR yes 27808289
chr1 29565638 29565648 SREBF2 JASPAR yes 27808290
chr1 29565638 29565648 SREBF1 JASPAR yes 118263979
chr1 29565638 29565648 SREBF2 JASPAR yes 118263980
chr1 29565667 29565673 LEF1 TRANSFAC yes 27808291
chr1 29565667 29565673 SOX10 JASPAR yes 27808292
chr1 29565667 29565673 LEF1 TRANSFAC yes 118263981
chr1 29565667 29565673 SOX10 JASPAR yes 118263982
chr1 29565669 29565684 MEF2A JASPAR yes 27808293
chr1 29565669 29565684 MEF2A JASPAR yes 118263983
chr1 29565670 29565685 MEF2C JASPAR yes 27808294
chr1 29565670 29565685 MEF2C JASPAR yes 118263984
chr1 29565671 29565683 MEF2B JASPAR yes 27808295
chr1 29565671 29565683 MEF2B JASPAR yes 118263985
chr1 29565685 29565699 NR2F1 JASPAR yes 27808296
chr1 29565685 29565699 NR2F1 JASPAR yes 118263986
chr1 29565726 29565732 MZF1 JASPAR yes 27808297
chr1 29565726 29565732 MZF1 JASPAR yes 118263987
chr1 29565731 29565741 SMAD3 JASPAR yes 27808298
chr1 29565731 29565741 SMAD3 JASPAR yes 118263988
SNP sites on vista1022[chr1:29565515-29565732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29565569 rs566372563 T G no 196334
chr1 29565581 rs538620429 G C no 196335
chr1 29565609 rs34095513 G A no 196336
Genes possibly regulated by vista1022[chr1:29565515-29565732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 42984
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 91939
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 97513
Expression level of Genes
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miRNAs possibly regulated by vista1022[chr1:29565515-29565732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 241395473 241395493 + hsa-miR-149-3p MIMAT0004609 241375106 2.268165167787518e-05 0.913792 0.570949 1028
Expression level of miRNAs
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