EnhancerDB
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  3. vista1023[chr1:29565762-29566055]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1023[chr1:29565762-29566055]
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Tissue distribution of vista1023
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Transcription factor that possibly regulate vista1023[chr1:29565762-29566055]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29565749 29565768 REST JASPAR yes 27808300
chr1 29565749 29565768 REST JASPAR yes 118263989
chr1 29565770 29565781 ELK4 JASPAR yes 27808301
chr1 29565770 29565781 ELK4 JASPAR yes 118263990
chr1 29565770 29565783 ELF3 JASPAR yes 27808302
chr1 29565770 29565783 ELF3 JASPAR yes 118263991
chr1 29565771 29565781 GABPA JASPAR yes 27808303
chr1 29565771 29565781 GABPA JASPAR yes 118263992
chr1 29565771 29565782 ELF5 JASPAR yes 27808304
chr1 29565771 29565782 SPDEF JASPAR yes 27808305
chr1 29565771 29565782 ELF5 JASPAR yes 118263993
chr1 29565771 29565782 SPDEF JASPAR yes 118263994
chr1 29565771 29565783 EHF JASPAR yes 27808306
chr1 29565771 29565783 ELF1 JASPAR yes 27808307
chr1 29565771 29565783 ELF4 JASPAR yes 27808308
chr1 29565771 29565783 EHF JASPAR yes 118263995
chr1 29565771 29565783 ELF1 JASPAR yes 118263996
chr1 29565771 29565783 ELF4 JASPAR yes 118263997
chr1 29565772 29565781 ELK4 JASPAR yes 27808309
chr1 29565772 29565781 ELK4 JASPAR yes 118263998
chr1 29565773 29565779 ETS1 JASPAR yes 27808310
chr1 29565773 29565779 SPI1 JASPAR yes 27808311
chr1 29565773 29565779 ETS1 JASPAR yes 118263999
chr1 29565773 29565779 SPI1 JASPAR yes 118264000
chr1 29565783 29565793 SP1 JASPAR yes 27808312
chr1 29565783 29565793 SP1 JASPAR yes 118264001
chr1 29565784 29565789 SP1 TRANSFAC yes 27808313
chr1 29565784 29565789 SP1 TRANSFAC yes 118264002
chr1 29565821 29565837 POU4F2 JASPAR yes 27808314
chr1 29565821 29565837 POU4F2 JASPAR yes 118264003
chr1 29565822 29565837 FOXA1 JASPAR yes 27808315
chr1 29565822 29565837 FOXA1 JASPAR yes 118264004
chr1 29565825 29565836 FOXC1 JASPAR yes 27808316
chr1 29565825 29565836 FOXC1 JASPAR yes 118264005
chr1 29565826 29565830 YY1 TRANSFAC yes 27808317
chr1 29565826 29565830 YY1 TRANSFAC yes 118264006
chr1 29565826 29565837 FOXA1 JASPAR yes 27808318
chr1 29565826 29565837 FOXA1 JASPAR yes 118264007
chr1 29565849 29565853 YY1 TRANSFAC yes 27808319
chr1 29565849 29565853 YY1 TRANSFAC yes 118264008
chr1 29565875 29565896 ZNF263 JASPAR yes 27808320
chr1 29565875 29565896 ZNF263 JASPAR yes 118264009
chr1 29565910 29565925 IRF9 JASPAR yes 27808321
chr1 29565910 29565925 IRF9 JASPAR yes 118264010
chr1 29565917 29565928 CEBPA JASPAR yes 27808322
chr1 29565917 29565928 CEBPA JASPAR yes 118264011
chr1 29565918 29565928 CEBPB JASPAR yes 27808323
chr1 29565918 29565928 CEBPE JASPAR yes 27808324
chr1 29565918 29565928 CEBPG JASPAR yes 27808325
chr1 29565918 29565928 CEBPB JASPAR yes 118264012
chr1 29565918 29565928 CEBPE JASPAR yes 118264013
chr1 29565918 29565928 CEBPG JASPAR yes 118264014
chr1 29565918 29565929 CEBPB JASPAR yes 27808326
chr1 29565918 29565929 CEBPB JASPAR yes 118264015
chr1 29565921 29565925 LFA1 TRANSFAC yes 27808327
chr1 29565921 29565925 LFA1 TRANSFAC yes 118264016
chr1 29565921 29565932 CDX2 JASPAR yes 27808328
chr1 29565921 29565932 CDX2 JASPAR yes 118264017
chr1 29565922 29565933 HOXA10 JASPAR yes 27808329
chr1 29565922 29565933 HOXA10 JASPAR yes 118264018
chr1 29565923 29565932 CDX1 JASPAR yes 27808330
chr1 29565923 29565932 CDX1 JASPAR yes 118264019
chr1 29565928 29565948 TP53 JASPAR yes 27808331
chr1 29565928 29565948 TP53 JASPAR yes 118264020
chr1 29565930 29565950 TP63 JASPAR yes 27808332
chr1 29565930 29565950 TP63 JASPAR yes 118264021
chr1 29565931 29565949 TP53 JASPAR yes 27808333
chr1 29565931 29565949 TP73 JASPAR yes 27808334
chr1 29565931 29565949 TP53 JASPAR yes 118264022
chr1 29565931 29565949 TP73 JASPAR yes 118264023
chr1 29565932 29565952 TP53 JASPAR yes 27808335
chr1 29565932 29565952 TP53 JASPAR yes 118264024
chr1 29565933 29565948 TP53 JASPAR yes 27808336
chr1 29565933 29565948 TP53 JASPAR yes 118264025
chr1 29565940 29565944 LFA1 TRANSFAC yes 27808337
chr1 29565940 29565944 LFA1 TRANSFAC yes 118264026
chr1 29565955 29565967 TFAP2C JASPAR yes 27808338
chr1 29565955 29565967 TFAP2C JASPAR yes 118264027
chr1 29565955 29565970 TFAP2A JASPAR yes 27808339
chr1 29565955 29565970 TFAP2C JASPAR yes 27808340
chr1 29565955 29565970 TFAP2A JASPAR yes 118264028
chr1 29565955 29565970 TFAP2C JASPAR yes 118264029
chr1 29565956 29565967 EBF1 JASPAR yes 27808341
chr1 29565956 29565967 TFAP2A JASPAR yes 27808342
chr1 29565956 29565967 TFAP2B JASPAR yes 27808343
chr1 29565956 29565967 TFAP2C JASPAR yes 27808344
chr1 29565956 29565967 EBF1 JASPAR yes 118264030
chr1 29565956 29565967 TFAP2A JASPAR yes 118264031
chr1 29565956 29565967 TFAP2B JASPAR yes 118264032
chr1 29565956 29565967 TFAP2C JASPAR yes 118264033
chr1 29565957 29565966 TFAP2A JASPAR yes 27808345
chr1 29565957 29565966 TFAP2A JASPAR yes 118264034
chr1 29565958 29565973 RFX5 JASPAR yes 27808346
chr1 29565958 29565973 RFX5 JASPAR yes 118264035
chr1 29565967 29565977 SP1 JASPAR yes 27808347
chr1 29565967 29565977 SP1 JASPAR yes 118264036
chr1 29565968 29565977 SP1 TRANSFAC yes 27808348
chr1 29565968 29565977 SP1 TRANSFAC yes 118264037
chr1 29565969 29565975 MAZ TRANSFAC yes 27808349
chr1 29565969 29565975 MAZ TRANSFAC yes 118264038
chr1 29565979 29565992 ELF1 JASPAR yes 27808350
chr1 29565979 29565992 ELF1 JASPAR yes 118264039
chr1 29565980 29565992 EHF JASPAR yes 27808351
chr1 29565980 29565992 EHF JASPAR yes 118264040
chr1 29565980 29565993 ELF3 JASPAR yes 27808352
chr1 29565980 29565993 ELF3 JASPAR yes 118264041
chr1 29565981 29565992 ELF5 JASPAR yes 27808353
chr1 29565981 29565992 ELF5 JASPAR yes 118264042
chr1 29565982 29565993 ELK4 JASPAR yes 27808354
chr1 29565982 29565993 FLI1 JASPAR yes 27808355
chr1 29565982 29565993 ELK4 JASPAR yes 118264043
chr1 29565982 29565993 FLI1 JASPAR yes 118264044
chr1 29565987 29566003 SOX4 JASPAR yes 27808356
chr1 29565987 29566003 SOX4 JASPAR yes 118264045
chr1 29565988 29566003 SOX21 JASPAR yes 27808357
chr1 29565988 29566003 SOX21 JASPAR yes 118264046
chr1 29566006 29566011 SP1 TRANSFAC yes 27808358
chr1 29566006 29566011 SP1 TRANSFAC yes 118264047
chr1 29566007 29566019 HINFP JASPAR yes 27808359
chr1 29566007 29566019 HINFP JASPAR yes 118264048
chr1 29566008 29566013 TFAP2A TRANSFAC yes 27808360
chr1 29566008 29566013 TFAP2A TRANSFAC yes 118264049
chr1 29566008 29566014 MZF1 JASPAR yes 27808361
chr1 29566008 29566014 MZF1 JASPAR yes 118264050
SNP sites on vista1023[chr1:29565762-29566055]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29565769 rs192603860 C T no 196337
chr1 29565818 rs116486502 C A no 196338
chr1 29565838 rs554018940 C G no 196339
chr1 29565872 rs369502974 G C no 196340
chr1 29565882 rs11810941 C T
ZNF263
196341
chr1 29565953 rs187398170 C T no 196342
chr1 29566036 rs146871045 G A no 196343
Genes possibly regulated by vista1023[chr1:29565762-29566055]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 42737
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 91692
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 97266
Expression level of Genes
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miRNAs possibly regulated by vista1023[chr1:29565762-29566055]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 241395473 241395493 + hsa-miR-149-3p MIMAT0004609 241375106 6.189650903689032e-05 0.913792 0.570949 1028
Expression level of miRNAs
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