EnhancerDB
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  3. vista1024[chr1:29598339-29598546]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1024[chr1:29598339-29598546]
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Tissue distribution of vista1024
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Transcription factor that possibly regulate vista1024[chr1:29598339-29598546]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29598330 29598351 ZNF263 JASPAR yes 27811218
chr1 29598330 29598351 ZNF263 JASPAR yes 118264051
chr1 29598355 29598361 NFIC JASPAR yes 27811219
chr1 29598355 29598361 NFIC JASPAR yes 118264052
chr1 29598360 29598373 TFAP2A JASPAR yes 27811220
chr1 29598360 29598373 TFAP2B JASPAR yes 27811221
chr1 29598360 29598373 TFAP2C JASPAR yes 27811222
chr1 29598360 29598373 TFAP2A JASPAR yes 118264053
chr1 29598360 29598373 TFAP2B JASPAR yes 118264054
chr1 29598360 29598373 TFAP2C JASPAR yes 118264055
chr1 29598376 29598381 ETS2 TRANSFAC yes 27811223
chr1 29598376 29598381 ETS2 TRANSFAC yes 118264056
chr1 29598376 29598386 TEAD1 JASPAR yes 27811224
chr1 29598376 29598386 TEAD4 JASPAR yes 27811225
chr1 29598376 29598386 TEAD1 JASPAR yes 118264057
chr1 29598376 29598386 TEAD4 JASPAR yes 118264058
chr1 29598377 29598385 TEAD3 JASPAR yes 27811226
chr1 29598377 29598385 TEAD3 JASPAR yes 118264059
chr1 29598386 29598390 LFA1 TRANSFAC yes 27811227
chr1 29598386 29598390 LFA1 TRANSFAC yes 118264060
chr1 29598390 29598400 TEAD4 JASPAR yes 27811228
chr1 29598390 29598400 TEAD4 JASPAR yes 118264061
chr1 29598390 29598402 TEAD1 JASPAR yes 27811229
chr1 29598390 29598402 TEAD1 JASPAR yes 118264062
chr1 29598391 29598399 TEAD3 JASPAR yes 27811230
chr1 29598391 29598399 TEAD3 JASPAR yes 118264063
chr1 29598392 29598406 GLIS2 JASPAR yes 27811231
chr1 29598392 29598406 GLIS3 JASPAR yes 27811232
chr1 29598392 29598406 GLIS2 JASPAR yes 118264064
chr1 29598392 29598406 GLIS3 JASPAR yes 118264065
chr1 29598394 29598406 INSM1 JASPAR yes 27811233
chr1 29598394 29598406 INSM1 JASPAR yes 118264066
chr1 29598399 29598409 SP1 JASPAR yes 27811234
chr1 29598399 29598409 SP1 JASPAR yes 118264067
chr1 29598402 29598407 SP1 TRANSFAC yes 27811235
chr1 29598402 29598407 SP1 TRANSFAC yes 118264068
chr1 29598404 29598409 TFAP2A TRANSFAC yes 27811236
chr1 29598404 29598409 TFAP2A TRANSFAC yes 118264069
chr1 29598404 29598410 MZF1 JASPAR yes 27811237
chr1 29598404 29598410 MZF1 JASPAR yes 118264070
chr1 29598409 29598419 SREBF1 JASPAR yes 27811238
chr1 29598409 29598419 SREBF2 JASPAR yes 27811239
chr1 29598409 29598419 SREBF1 JASPAR yes 118264071
chr1 29598409 29598419 SREBF2 JASPAR yes 118264072
chr1 29598410 29598418 MGA JASPAR yes 27811240
chr1 29598410 29598418 MGA JASPAR yes 118264073
chr1 29598414 29598424 SREBF1 JASPAR yes 27811241
chr1 29598414 29598424 SREBF1 JASPAR yes 118264074
chr1 29598429 29598444 AR JASPAR yes 27811242
chr1 29598429 29598444 AR JASPAR yes 118264075
chr1 29598451 29598466 FOXA1 JASPAR yes 27811243
chr1 29598451 29598466 FOXA1 JASPAR yes 118264076
chr1 29598452 29598464 FOXC2 JASPAR yes 27811244
chr1 29598452 29598464 FOXC2 JASPAR yes 118264077
chr1 29598509 29598513 LFA1 TRANSFAC yes 27811245
chr1 29598509 29598513 LFA1 TRANSFAC yes 118264078
SNP sites on vista1024[chr1:29598339-29598546]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1024[chr1:29598339-29598546]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 10160
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 59115
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 64689
Expression level of Genes
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miRNAs possibly regulated by vista1024[chr1:29598339-29598546]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results