EnhancerDB
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  3. vista1025[chr1:29683297-29683456]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1025[chr1:29683297-29683456]
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Tissue distribution of vista1025
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Transcription factor that possibly regulate vista1025[chr1:29683297-29683456]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29683303 29683314 STAT1 JASPAR yes 27812320
chr1 29683303 29683314 STAT3 JASPAR yes 27812321
chr1 29683303 29683314 STAT1 JASPAR yes 118264079
chr1 29683303 29683314 STAT3 JASPAR yes 118264080
chr1 29683316 29683327 NRF1 JASPAR yes 27812322
chr1 29683316 29683327 NRF1 JASPAR yes 118264081
chr1 29683317 29683321 LFA1 TRANSFAC yes 27812323
chr1 29683317 29683321 LFA1 TRANSFAC yes 118264082
chr1 29683317 29683329 NHLH1 JASPAR yes 27812324
chr1 29683317 29683329 NHLH1 JASPAR yes 118264083
chr1 29683318 29683327 SNAI2 JASPAR yes 27812325
chr1 29683318 29683327 SNAI2 JASPAR yes 118264084
chr1 29683318 29683328 ID4 JASPAR yes 27812326
chr1 29683318 29683328 NHLH1 JASPAR yes 27812327
chr1 29683318 29683328 TCF3 JASPAR yes 27812328
chr1 29683318 29683328 TCF4 JASPAR yes 27812329
chr1 29683318 29683328 ID4 JASPAR yes 118264085
chr1 29683318 29683328 NHLH1 JASPAR yes 118264086
chr1 29683318 29683328 TCF3 JASPAR yes 118264087
chr1 29683318 29683328 TCF4 JASPAR yes 118264088
chr1 29683320 29683329 ZEB1 JASPAR yes 27812330
chr1 29683320 29683329 ZEB1 JASPAR yes 118264089
chr1 29683337 29683342 SP1 TRANSFAC yes 27812331
chr1 29683337 29683342 SP1 TRANSFAC yes 118264090
chr1 29683338 29683348 SP1 JASPAR yes 27812332
chr1 29683338 29683348 SP1 JASPAR yes 118264091
chr1 29683339 29683348 SP1 TRANSFAC yes 27812333
chr1 29683339 29683348 SP1 TRANSFAC yes 118264092
chr1 29683340 29683345 SP1 TRANSFAC yes 27812334
chr1 29683340 29683345 SP1 TRANSFAC yes 118264093
chr1 29683341 29683346 SP1 TRANSFAC yes 27812335
chr1 29683341 29683346 SP1 TRANSFAC yes 118264094
chr1 29683341 29683347 SP1 TRANSFAC yes 27812336
chr1 29683341 29683347 SP1 TRANSFAC yes 118264095
chr1 29683344 29683349 SP1 TRANSFAC yes 27812337
chr1 29683344 29683349 SP1 TRANSFAC yes 118264096
chr1 29683344 29683358 PLAG1 JASPAR yes 27812338
chr1 29683344 29683358 PLAG1 JASPAR yes 118264097
chr1 29683352 29683357 SP1 TRANSFAC yes 27812339
chr1 29683352 29683357 SP1 TRANSFAC yes 118264098
chr1 29683364 29683369 SP1 TRANSFAC yes 27812340
chr1 29683364 29683369 SP1 TRANSFAC yes 118264099
chr1 29683365 29683370 SP1 TRANSFAC yes 27812341
chr1 29683365 29683370 SP1 TRANSFAC yes 118264100
chr1 29683379 29683385 NFIC JASPAR yes 27812342
chr1 29683379 29683385 NFIC JASPAR yes 118264101
chr1 29683381 29683385 H1TF2 TRANSFAC yes 27812343
chr1 29683381 29683385 NFE TRANSFAC yes 27812344
chr1 29683381 29683385 SRF TRANSFAC yes 27812345
chr1 29683381 29683385 H1TF2 TRANSFAC yes 118264102
chr1 29683381 29683385 NFE TRANSFAC yes 118264103
chr1 29683381 29683385 SRF TRANSFAC yes 118264104
chr1 29683391 29683406 NFYB JASPAR yes 27812346
chr1 29683391 29683406 NFYB JASPAR yes 118264105
chr1 29683393 29683409 NFYA JASPAR yes 27812347
chr1 29683393 29683409 NFYA JASPAR yes 118264106
chr1 29683394 29683412 NFYA JASPAR yes 27812348
chr1 29683394 29683412 NFYA JASPAR yes 118264107
chr1 29683398 29683402 H1TF2 TRANSFAC yes 27812349
chr1 29683398 29683402 NFE TRANSFAC yes 27812350
chr1 29683398 29683402 SRF TRANSFAC yes 27812351
chr1 29683398 29683402 H1TF2 TRANSFAC yes 118264108
chr1 29683398 29683402 NFE TRANSFAC yes 118264109
chr1 29683398 29683402 SRF TRANSFAC yes 118264110
chr1 29683420 29683424 NFE TRANSFAC yes 27812352
chr1 29683420 29683424 NFE TRANSFAC yes 118264111
chr1 29683439 29683444 GATA1 TRANSFAC yes 27812353
chr1 29683439 29683444 GATA1 TRANSFAC yes 118264112
chr1 29683448 29683453 SP1 TRANSFAC yes 27812354
chr1 29683448 29683453 SP1 TRANSFAC yes 118264113
chr1 29683455 29683465 SREBF1 JASPAR yes 27812355
chr1 29683455 29683465 SREBF1 JASPAR yes 118264114
SNP sites on vista1025[chr1:29683297-29683456]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29683328 rs34407416 G A,T
ID4 NHLH1 TCF3 TCF4 ZEB1
196667
chr1 29683355 rs539058707 G A
PLAG1 SP1
196668
chr1 29683402 rs563804519 A G
H1TF2 NFE NFYA NFYB SRF
196669
Genes possibly regulated by vista1025[chr1:29683297-29683456]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1025[chr1:29683297-29683456]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results