EnhancerDB
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  3. vista1035[chr1:31180963-31181332]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1035[chr1:31180963-31181332]
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Tissue distribution of vista1035
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Transcription factor that possibly regulate vista1035[chr1:31180963-31181332]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31180953 31180965 TGIF1 JASPAR yes 27874229
chr1 31180953 31180965 TGIF1 JASPAR yes 118264555
chr1 31180984 31181005 ZNF263 JASPAR yes 27874230
chr1 31180984 31181005 ZNF263 JASPAR yes 118264556
chr1 31180985 31180990 ETS2 TRANSFAC yes 27874231
chr1 31180985 31180990 ETS2 TRANSFAC yes 118264557
chr1 31180987 31181008 ZNF263 JASPAR yes 27874232
chr1 31180987 31181008 ZNF263 JASPAR yes 118264558
chr1 31180990 31181011 ZNF263 JASPAR yes 27874233
chr1 31180990 31181011 ZNF263 JASPAR yes 118264559
chr1 31180996 31181017 ZNF263 JASPAR yes 27874234
chr1 31180996 31181017 ZNF263 JASPAR yes 118264560
chr1 31180997 31181002 ETS2 TRANSFAC yes 27874235
chr1 31180997 31181002 ETS2 TRANSFAC yes 118264561
chr1 31180999 31181009 SP1 JASPAR yes 27874236
chr1 31180999 31181009 SP1 JASPAR yes 118264562
chr1 31180999 31181020 ZNF263 JASPAR yes 27874237
chr1 31180999 31181020 ZNF263 JASPAR yes 118264563
chr1 31181005 31181015 GSC2 JASPAR yes 27874238
chr1 31181005 31181015 GSC JASPAR yes 27874239
chr1 31181005 31181015 GSC2 JASPAR yes 118264564
chr1 31181005 31181015 GSC JASPAR yes 118264565
chr1 31181006 31181014 OTX1 JASPAR yes 27874240
chr1 31181006 31181014 OTX2 JASPAR yes 27874241
chr1 31181006 31181014 RHOXF1 JASPAR yes 27874242
chr1 31181006 31181014 OTX1 JASPAR yes 118264566
chr1 31181006 31181014 OTX2 JASPAR yes 118264567
chr1 31181006 31181014 RHOXF1 JASPAR yes 118264568
chr1 31181006 31181015 PITX3 JASPAR yes 27874243
chr1 31181006 31181015 PITX3 JASPAR yes 118264569
chr1 31181015 31181028 DUXA JASPAR yes 27874244
chr1 31181015 31181028 DUXA JASPAR yes 118264570
chr1 31181016 31181027 DUX4 JASPAR yes 27874245
chr1 31181016 31181027 PHOX2A JASPAR yes 27874246
chr1 31181016 31181027 PROP1 JASPAR yes 27874247
chr1 31181016 31181027 DUX4 JASPAR yes 118264571
chr1 31181016 31181027 PHOX2A JASPAR yes 118264572
chr1 31181016 31181027 PROP1 JASPAR yes 118264573
chr1 31181024 31181032 ISL2 JASPAR yes 27874248
chr1 31181024 31181032 ISL2 JASPAR yes 118264574
chr1 31181024 31181033 NKX3-2 JASPAR yes 27874249
chr1 31181024 31181033 NKX3-2 JASPAR yes 118264575
chr1 31181028 31181041 SCRT2 JASPAR yes 27874250
chr1 31181028 31181041 SCRT2 JASPAR yes 118264576
chr1 31181031 31181043 HES7 JASPAR yes 27874251
chr1 31181031 31181043 PKNOX1 JASPAR yes 27874252
chr1 31181031 31181043 TGIF1 JASPAR yes 27874253
chr1 31181031 31181043 TGIF2 JASPAR yes 27874254
chr1 31181031 31181043 HES7 JASPAR yes 118264577
chr1 31181031 31181043 PKNOX1 JASPAR yes 118264578
chr1 31181031 31181043 TGIF1 JASPAR yes 118264579
chr1 31181031 31181043 TGIF2 JASPAR yes 118264580
chr1 31181032 31181041 SNAI2 JASPAR yes 27874255
chr1 31181032 31181041 SNAI2 JASPAR yes 118264581
chr1 31181032 31181042 HEY2 JASPAR yes 27874256
chr1 31181032 31181042 ID4 JASPAR yes 27874257
chr1 31181032 31181042 TCF4 JASPAR yes 27874258
chr1 31181032 31181042 HEY2 JASPAR yes 118264582
chr1 31181032 31181042 ID4 JASPAR yes 118264583
chr1 31181032 31181042 TCF4 JASPAR yes 118264584
chr1 31181036 31181055 RFX2 JASPAR yes 27874259
chr1 31181036 31181055 RFX2 JASPAR yes 118264585
chr1 31181038 31181053 RFX5 JASPAR yes 27874260
chr1 31181038 31181053 RFX5 JASPAR yes 118264586
chr1 31181041 31181059 ESR1 JASPAR yes 27874261
chr1 31181041 31181059 ESR1 JASPAR yes 118264587
chr1 31181045 31181053 MEIS3 JASPAR yes 27874262
chr1 31181045 31181053 MEIS3 JASPAR yes 118264588
chr1 31181085 31181095 SP1 JASPAR yes 27874263
chr1 31181085 31181095 SP1 JASPAR yes 118264589
chr1 31181086 31181096 SP1 JASPAR yes 27874264
chr1 31181086 31181096 SP1 JASPAR yes 118264590
chr1 31181088 31181102 GLIS3 JASPAR yes 27874265
chr1 31181088 31181102 GLIS3 JASPAR yes 118264591
chr1 31181107 31181117 SREBF1 JASPAR yes 27874266
chr1 31181107 31181117 SREBF2 JASPAR yes 27874267
chr1 31181107 31181117 SREBF1 JASPAR yes 118264592
chr1 31181107 31181117 SREBF2 JASPAR yes 118264593
chr1 31181112 31181124 TEAD1 JASPAR yes 27874268
chr1 31181112 31181124 TEAD1 JASPAR yes 118264594
chr1 31181124 31181128 H1TF2 TRANSFAC yes 27874269
chr1 31181124 31181128 NFE TRANSFAC yes 27874270
chr1 31181124 31181128 SRF TRANSFAC yes 27874271
chr1 31181124 31181128 H1TF2 TRANSFAC yes 118264595
chr1 31181124 31181128 NFE TRANSFAC yes 118264596
chr1 31181124 31181128 SRF TRANSFAC yes 118264597
chr1 31181128 31181147 CTCF JASPAR yes 27874272
chr1 31181128 31181147 CTCF JASPAR yes 118264598
chr1 31181129 31181141 YY1 JASPAR yes 27874273
chr1 31181129 31181141 YY1 JASPAR yes 118264599
chr1 31181132 31181138 YY1 JASPAR yes 27874274
chr1 31181132 31181138 YY1 JASPAR yes 118264600
chr1 31181145 31181156 FLI1 JASPAR yes 27874275
chr1 31181145 31181156 FLI1 JASPAR yes 118264601
chr1 31181191 31181206 RUNX2 JASPAR yes 27874276
chr1 31181191 31181206 RUNX2 JASPAR yes 118264602
chr1 31181192 31181202 RUNX3 JASPAR yes 27874277
chr1 31181192 31181202 RUNX3 JASPAR yes 118264603
chr1 31181192 31181203 RUNX1 JASPAR yes 27874278
chr1 31181192 31181203 RUNX1 JASPAR yes 118264604
chr1 31181206 31181211 MYC TRANSFAC yes 27874279
chr1 31181206 31181211 MYC TRANSFAC yes 118264605
chr1 31181212 31181216 ESR1 TRANSFAC yes 27874280
chr1 31181212 31181216 ESR1 TRANSFAC yes 118264606
chr1 31181218 31181222 YY1 TRANSFAC yes 27874281
chr1 31181218 31181222 YY1 TRANSFAC yes 118264607
chr1 31181228 31181239 DMRT3 JASPAR yes 27874282
chr1 31181228 31181239 DMRT3 JASPAR yes 118264608
chr1 31181271 31181286 FOXP1 JASPAR yes 27874283
chr1 31181271 31181286 FOXP1 JASPAR yes 118264609
chr1 31181283 31181294 FOXA1 JASPAR yes 27874284
chr1 31181283 31181294 FOXA1 JASPAR yes 118264610
chr1 31181283 31181298 FOXA1 JASPAR yes 27874285
chr1 31181283 31181298 FOXA1 JASPAR yes 118264611
chr1 31181284 31181295 FOXC1 JASPAR yes 27874286
chr1 31181284 31181295 FOXC1 JASPAR yes 118264612
chr1 31181284 31181296 FOXC2 JASPAR yes 27874287
chr1 31181284 31181296 FOXC2 JASPAR yes 118264613
chr1 31181288 31181299 PROP1 JASPAR yes 27874288
chr1 31181288 31181299 PROP1 JASPAR yes 118264614
chr1 31181290 31181305 HNF1A JASPAR yes 27874289
chr1 31181290 31181305 HNF1A JASPAR yes 118264615
chr1 31181291 31181304 HNF1B JASPAR yes 27874290
chr1 31181291 31181304 HNF1B JASPAR yes 118264616
chr1 31181291 31181305 POU4F1 JASPAR yes 27874291
chr1 31181291 31181305 POU4F1 JASPAR yes 118264617
chr1 31181291 31181307 POU4F3 JASPAR yes 27874292
chr1 31181291 31181307 POU4F3 JASPAR yes 118264618
chr1 31181300 31181306 TBP TRANSFAC yes 27874293
chr1 31181300 31181306 TBP TRANSFAC yes 118264619
chr1 31181318 31181333 HNF4G JASPAR yes 27874294
chr1 31181318 31181333 HNF4G JASPAR yes 118264620
chr1 31181319 31181333 NR2F1 JASPAR yes 27874295
chr1 31181319 31181333 NR2F1 JASPAR yes 118264621
chr1 31181319 31181334 HNF4A JASPAR yes 27874296
chr1 31181319 31181334 HNF4A JASPAR yes 118264622
chr1 31181327 31181331 H4TF2 TRANSFAC yes 27874297
chr1 31181327 31181331 H4TF2 TRANSFAC yes 118264623
SNP sites on vista1035[chr1:31180963-31181332]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31180972 rs12097327 A C no 205382
chr1 31181054 rs36091053 G A,C
ESR1 RFX2
205383
chr1 31181074 rs11590916 A G no 205384
chr1 31181103 rs535520541 G A no 205385
chr1 31181105 rs142775698 C G,T no 205386
chr1 31181116 rs146150997 A G
SREBF1 SREBF2 TEAD1
205387
chr1 31181149 rs35959405 C A
FLI1
205388
chr1 31181192 rs2889651 C T
RUNX1 RUNX2 RUNX3
205389
chr1 31181212 rs35953489 T C
ESR1
205390
chr1 31181302 rs186257760 A T
HNF1A HNF1B POU4F1 POU4F3 TBP
205391
chr1 31181308 rs143778064 A T no 205392
Genes possibly regulated by vista1035[chr1:31180963-31181332]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 84898
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 50665
Expression level of Genes
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miRNAs possibly regulated by vista1035[chr1:31180963-31181332]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results