EnhancerDB
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  3. vista1037[chr1:31218107-31218539]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1037[chr1:31218107-31218539]
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Tissue distribution of vista1037
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Transcription factor that possibly regulate vista1037[chr1:31218107-31218539]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31218105 31218120 TFAP2A JASPAR yes 27875035
chr1 31218105 31218120 TFAP2C JASPAR yes 27875036
chr1 31218105 31218120 TFAP2A JASPAR yes 118264760
chr1 31218105 31218120 TFAP2C JASPAR yes 118264761
chr1 31218108 31218119 TFAP2A JASPAR yes 27875037
chr1 31218108 31218119 TFAP2A JASPAR yes 118264762
chr1 31218119 31218131 NHLH1 JASPAR yes 27875038
chr1 31218119 31218131 NHLH1 JASPAR yes 118264763
chr1 31218120 31218130 TFAP4 JASPAR yes 27875039
chr1 31218120 31218130 TFAP4 JASPAR yes 118264764
chr1 31218120 31218132 TAL1 JASPAR yes 27875040
chr1 31218120 31218132 TAL1 JASPAR yes 118264765
chr1 31218127 31218131 ESR1 TRANSFAC yes 27875041
chr1 31218127 31218131 ESR1 TRANSFAC yes 118264766
chr1 31218137 31218151 NR2F1 JASPAR yes 27875042
chr1 31218137 31218151 NR2F1 JASPAR yes 118264767
chr1 31218159 31218163 H1TF2 TRANSFAC yes 27875043
chr1 31218159 31218163 NFE TRANSFAC yes 27875044
chr1 31218159 31218163 SRF TRANSFAC yes 27875045
chr1 31218159 31218163 H1TF2 TRANSFAC yes 118264768
chr1 31218159 31218163 NFE TRANSFAC yes 118264769
chr1 31218159 31218163 SRF TRANSFAC yes 118264770
chr1 31218199 31218214 TFAP2A JASPAR yes 27875046
chr1 31218199 31218214 TFAP2C JASPAR yes 27875047
chr1 31218199 31218214 TFAP2A JASPAR yes 118264771
chr1 31218199 31218214 TFAP2C JASPAR yes 118264772
chr1 31218202 31218213 TFAP2A JASPAR yes 27875048
chr1 31218202 31218213 TFAP2B JASPAR yes 27875049
chr1 31218202 31218213 TFAP2C JASPAR yes 27875050
chr1 31218202 31218213 TFAP2A JASPAR yes 118264773
chr1 31218202 31218213 TFAP2B JASPAR yes 118264774
chr1 31218202 31218213 TFAP2C JASPAR yes 118264775
chr1 31218213 31218216 MYB TRANSFAC yes 27875051
chr1 31218213 31218216 MYB TRANSFAC yes 118264776
chr1 31218213 31218227 RXRB JASPAR yes 27875052
chr1 31218213 31218227 RXRG JASPAR yes 27875053
chr1 31218213 31218227 RXRB JASPAR yes 118264777
chr1 31218213 31218227 RXRG JASPAR yes 118264778
chr1 31218213 31218228 NR2C2 JASPAR yes 27875054
chr1 31218213 31218228 NR2C2 JASPAR yes 118264779
chr1 31218221 31218235 PLAG1 JASPAR yes 27875055
chr1 31218221 31218235 PLAG1 JASPAR yes 118264780
chr1 31218251 31218263 INSM1 JASPAR yes 27875056
chr1 31218251 31218263 INSM1 JASPAR yes 118264781
chr1 31218251 31218272 ZNF263 JASPAR yes 27875057
chr1 31218251 31218272 ZNF263 JASPAR yes 118264782
chr1 31218254 31218264 SP1 JASPAR yes 27875058
chr1 31218254 31218264 SP1 JASPAR yes 118264783
chr1 31218260 31218270 SP1 JASPAR yes 27875059
chr1 31218260 31218270 SP1 JASPAR yes 118264784
chr1 31218261 31218282 ZNF263 JASPAR yes 27875060
chr1 31218261 31218282 ZNF263 JASPAR yes 118264785
chr1 31218262 31218283 ZNF263 JASPAR yes 27875061
chr1 31218262 31218283 ZNF263 JASPAR yes 118264786
chr1 31218277 31218287 MZF1 JASPAR yes 27875062
chr1 31218277 31218287 MZF1 JASPAR yes 118264787
chr1 31218278 31218288 SP1 JASPAR yes 27875063
chr1 31218278 31218288 SP1 JASPAR yes 118264788
chr1 31218280 31218286 SP1 TRANSFAC yes 27875064
chr1 31218280 31218286 SP1 TRANSFAC yes 118264789
chr1 31218280 31218290 SP1 JASPAR yes 27875065
chr1 31218280 31218290 SP1 JASPAR yes 118264790
chr1 31218280 31218301 ZNF263 JASPAR yes 27875066
chr1 31218280 31218301 ZNF263 JASPAR yes 118264791
chr1 31218281 31218292 E2F6 JASPAR yes 27875067
chr1 31218281 31218292 E2F6 JASPAR yes 118264792
chr1 31218281 31218302 ZNF263 JASPAR yes 27875068
chr1 31218281 31218302 ZNF263 JASPAR yes 118264793
chr1 31218287 31218301 PLAG1 JASPAR yes 27875069
chr1 31218287 31218301 PLAG1 JASPAR yes 118264794
chr1 31218295 31218310 RFX5 JASPAR yes 27875070
chr1 31218295 31218310 RFX5 JASPAR yes 118264795
chr1 31218319 31218323 YY1 TRANSFAC yes 27875071
chr1 31218319 31218323 YY1 TRANSFAC yes 118264796
chr1 31218338 31218348 FIGLA JASPAR yes 27875072
chr1 31218338 31218348 TCF3 JASPAR yes 27875073
chr1 31218338 31218348 FIGLA JASPAR yes 118264797
chr1 31218338 31218348 TCF3 JASPAR yes 118264798
chr1 31218339 31218348 SNAI2 JASPAR yes 27875074
chr1 31218339 31218348 SNAI2 JASPAR yes 118264799
chr1 31218340 31218345 USF2 TRANSFAC yes 27875075
chr1 31218340 31218345 USF2 TRANSFAC yes 118264800
chr1 31218346 31218350 YY1 TRANSFAC yes 27875076
chr1 31218346 31218350 YY1 TRANSFAC yes 118264801
chr1 31218354 31218374 ESR1 JASPAR yes 27875077
chr1 31218354 31218374 ESR1 JASPAR yes 118264802
chr1 31218364 31218374 SP1 JASPAR yes 27875078
chr1 31218364 31218374 SP1 JASPAR yes 118264803
chr1 31218371 31218386 PRDM1 JASPAR yes 27875079
chr1 31218371 31218386 PRDM1 JASPAR yes 118264804
chr1 31218373 31218377 YY1 TRANSFAC yes 27875080
chr1 31218373 31218377 YY1 TRANSFAC yes 118264805
chr1 31218392 31218407 TFAP2C JASPAR yes 27875081
chr1 31218392 31218407 TFAP2C JASPAR yes 118264806
chr1 31218393 31218404 TFAP2A JASPAR yes 27875082
chr1 31218393 31218404 TFAP2B JASPAR yes 27875083
chr1 31218393 31218404 TFAP2A JASPAR yes 118264807
chr1 31218393 31218404 TFAP2B JASPAR yes 118264808
chr1 31218408 31218419 E2F6 JASPAR yes 27875084
chr1 31218408 31218419 E2F6 JASPAR yes 118264809
chr1 31218414 31218429 HNF4A JASPAR yes 27875085
chr1 31218414 31218429 HNF4A JASPAR yes 118264810
chr1 31218415 31218430 HNF4G JASPAR yes 27875086
chr1 31218415 31218430 HNF4G JASPAR yes 118264811
chr1 31218419 31218425 SOX10 JASPAR yes 27875087
chr1 31218419 31218425 SOX10 JASPAR yes 118264812
chr1 31218424 31218430 MZF1 JASPAR yes 27875088
chr1 31218424 31218430 MZF1 JASPAR yes 118264813
chr1 31218435 31218446 FOSL2 JASPAR yes 27875089
chr1 31218435 31218446 FOSL2 JASPAR yes 118264814
chr1 31218436 31218442 YY1 JASPAR yes 27875090
chr1 31218436 31218442 YY1 JASPAR yes 118264815
chr1 31218441 31218451 TFE3 JASPAR yes 27875091
chr1 31218441 31218451 TFE3 JASPAR yes 118264816
chr1 31218458 31218462 LFA1 TRANSFAC yes 27875092
chr1 31218458 31218462 LFA1 TRANSFAC yes 118264817
chr1 31218469 31218484 RUNX2 JASPAR yes 27875093
chr1 31218469 31218484 RUNX2 JASPAR yes 118264818
chr1 31218520 31218525 SP1 TRANSFAC yes 27875094
chr1 31218520 31218525 SP1 TRANSFAC yes 118264819
chr1 31218527 31218543 GLIS1 JASPAR yes 27875095
chr1 31218527 31218543 GLIS1 JASPAR yes 118264820
chr1 31218528 31218542 GLIS3 JASPAR yes 27875096
chr1 31218528 31218542 GLIS3 JASPAR yes 118264821
SNP sites on vista1037[chr1:31218107-31218539]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31218118 rs182282731 C A,T
TFAP2A TFAP2C
205668
chr1 31218195 rs536027010 C A no 205669
chr1 31218271 rs186897776 T C,G
ZNF263
205670
chr1 31218279 rs1188353 C A
MZF1 SP1 ZNF263
205671
chr1 31218356 rs147015491 C T
ESR1
205672
chr1 31218374 rs141803740 C CT
ESR1 PRDM1 SP1 YY1
205673
chr1 31218395 rs147602366 C T
TFAP2A TFAP2B TFAP2C
205674
chr1 31218436 rs116992015 G A
FOSL2 YY1
205675
chr1 31218463 rs192470303 A G no 205676
chr1 31218529 rs143284664 G A
GLIS1 GLIS3
205677
chr1 31218539 rs544004036 G A,T
GLIS1 GLIS3
205678
Genes possibly regulated by vista1037[chr1:31218107-31218539]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 78327
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 87872
Expression level of Genes
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miRNAs possibly regulated by vista1037[chr1:31218107-31218539]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 39797697 39797718 + hsa-miR-6871-3p MIMAT0027643 39766182 0.13464082046008521 0.839655 0.0 1043
Expression level of miRNAs
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