EnhancerDB
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  3. vista1038[chr1:31220962-31221590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1038[chr1:31220962-31221590]
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Tissue distribution of vista1038
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Transcription factor that possibly regulate vista1038[chr1:31220962-31221590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31220984 31220998 NR2F1 JASPAR yes 27875383
chr1 31220984 31220998 RXRB JASPAR yes 27875384
chr1 31220984 31220998 RXRG JASPAR yes 27875385
chr1 31220984 31220998 NR2F1 JASPAR yes 118264822
chr1 31220984 31220998 RXRB JASPAR yes 118264823
chr1 31220984 31220998 RXRG JASPAR yes 118264824
chr1 31221060 31221064 NFE TRANSFAC yes 27875386
chr1 31221060 31221064 NFE TRANSFAC yes 118264825
chr1 31221061 31221066 GATA2 JASPAR yes 27875387
chr1 31221061 31221066 GATA2 JASPAR yes 118264826
chr1 31221069 31221085 NFYA JASPAR yes 27875388
chr1 31221069 31221085 NFYA JASPAR yes 118264827
chr1 31221072 31221087 NFYB JASPAR yes 27875389
chr1 31221072 31221087 NFYB JASPAR yes 118264828
chr1 31221123 31221143 TP53 JASPAR yes 27875390
chr1 31221123 31221143 TP53 JASPAR yes 118264829
chr1 31221125 31221145 TP63 JASPAR yes 27875391
chr1 31221125 31221145 TP63 JASPAR yes 118264830
chr1 31221126 31221144 TP53 JASPAR yes 27875392
chr1 31221126 31221144 TP73 JASPAR yes 27875393
chr1 31221126 31221144 TP53 JASPAR yes 118264831
chr1 31221126 31221144 TP73 JASPAR yes 118264832
chr1 31221127 31221142 TP53 JASPAR yes 27875394
chr1 31221127 31221142 TP53 JASPAR yes 118264833
chr1 31221127 31221147 TP53 JASPAR yes 27875395
chr1 31221127 31221147 TP53 JASPAR yes 118264834
chr1 31221128 31221143 TP53 JASPAR yes 27875396
chr1 31221128 31221143 TP53 JASPAR yes 118264835
chr1 31221151 31221162 STAT3 JASPAR yes 27875397
chr1 31221151 31221162 STAT3 JASPAR yes 118264836
chr1 31221173 31221185 BHLHE23 JASPAR yes 27875398
chr1 31221173 31221185 BHLHE23 JASPAR yes 118264837
chr1 31221174 31221184 NEUROD2 JASPAR yes 27875399
chr1 31221174 31221184 OLIG2 JASPAR yes 27875400
chr1 31221174 31221184 OLIG3 JASPAR yes 27875401
chr1 31221174 31221184 NEUROD2 JASPAR yes 118264838
chr1 31221174 31221184 OLIG2 JASPAR yes 118264839
chr1 31221174 31221184 OLIG3 JASPAR yes 118264840
chr1 31221182 31221186 H4TF2 TRANSFAC yes 27875402
chr1 31221182 31221186 H4TF2 TRANSFAC yes 118264841
chr1 31221198 31221219 ZNF263 JASPAR yes 27875403
chr1 31221198 31221219 ZNF263 JASPAR yes 118264842
chr1 31221201 31221215 PLAG1 JASPAR yes 27875404
chr1 31221201 31221215 PLAG1 JASPAR yes 118264843
chr1 31221201 31221222 ZNF263 JASPAR yes 27875405
chr1 31221201 31221222 ZNF263 JASPAR yes 118264844
chr1 31221206 31221216 MZF1 JASPAR yes 27875406
chr1 31221206 31221216 MZF1 JASPAR yes 118264845
chr1 31221207 31221222 NR2C2 JASPAR yes 27875407
chr1 31221207 31221222 NR2C2 JASPAR yes 118264846
chr1 31221209 31221215 SP1 TRANSFAC yes 27875408
chr1 31221209 31221215 SP1 TRANSFAC yes 118264847
chr1 31221209 31221219 SP1 JASPAR yes 27875409
chr1 31221209 31221219 SP1 JASPAR yes 118264848
chr1 31221211 31221232 ZNF263 JASPAR yes 27875410
chr1 31221211 31221232 ZNF263 JASPAR yes 118264849
chr1 31221212 31221222 MZF1 JASPAR yes 27875411
chr1 31221212 31221222 MZF1 JASPAR yes 118264850
chr1 31221212 31221227 TFAP2A JASPAR yes 27875412
chr1 31221212 31221227 TFAP2C JASPAR yes 27875413
chr1 31221212 31221227 TFAP2A JASPAR yes 118264851
chr1 31221212 31221227 TFAP2C JASPAR yes 118264852
chr1 31221214 31221227 TFAP2A JASPAR yes 27875414
chr1 31221214 31221227 TFAP2B JASPAR yes 27875415
chr1 31221214 31221227 TFAP2C JASPAR yes 27875416
chr1 31221214 31221227 TFAP2A JASPAR yes 118264853
chr1 31221214 31221227 TFAP2B JASPAR yes 118264854
chr1 31221214 31221227 TFAP2C JASPAR yes 118264855
chr1 31221215 31221227 TFAP2A JASPAR yes 27875417
chr1 31221215 31221227 TFAP2B JASPAR yes 27875418
chr1 31221215 31221227 TFAP2C JASPAR yes 27875419
chr1 31221215 31221227 TFAP2A JASPAR yes 118264856
chr1 31221215 31221227 TFAP2B JASPAR yes 118264857
chr1 31221215 31221227 TFAP2C JASPAR yes 118264858
chr1 31221229 31221244 NR2C2 JASPAR yes 27875420
chr1 31221229 31221244 NR2C2 JASPAR yes 118264859
chr1 31221251 31221264 SMAD2 JASPAR yes 27875421
chr1 31221251 31221264 SMAD2 JASPAR yes 118264860
chr1 31221254 31221265 TBX20 JASPAR yes 27875422
chr1 31221254 31221265 TBX20 JASPAR yes 118264861
chr1 31221256 31221264 MGA JASPAR yes 27875423
chr1 31221256 31221264 TBX15 JASPAR yes 27875424
chr1 31221256 31221264 TBX1 JASPAR yes 27875425
chr1 31221256 31221264 TBX4 JASPAR yes 27875426
chr1 31221256 31221264 TBX5 JASPAR yes 27875427
chr1 31221256 31221264 MGA JASPAR yes 118264862
chr1 31221256 31221264 TBX15 JASPAR yes 118264863
chr1 31221256 31221264 TBX1 JASPAR yes 118264864
chr1 31221256 31221264 TBX4 JASPAR yes 118264865
chr1 31221256 31221264 TBX5 JASPAR yes 118264866
chr1 31221264 31221273 THAP1 JASPAR yes 27875428
chr1 31221264 31221273 THAP1 JASPAR yes 118264867
chr1 31221266 31221272 YY1 JASPAR yes 27875429
chr1 31221266 31221272 YY1 JASPAR yes 118264868
chr1 31221274 31221278 YY1 TRANSFAC yes 27875430
chr1 31221274 31221278 YY1 TRANSFAC yes 118264869
chr1 31221288 31221294 SP1 TRANSFAC yes 27875431
chr1 31221288 31221294 SP1 TRANSFAC yes 118264870
chr1 31221291 31221306 TFAP2C JASPAR yes 27875432
chr1 31221291 31221306 TFAP2C JASPAR yes 118264871
chr1 31221306 31221323 RXRA JASPAR yes 27875433
chr1 31221306 31221323 RXRA JASPAR yes 118264872
chr1 31221315 31221324 ZEB1 JASPAR yes 27875434
chr1 31221315 31221324 ZEB1 JASPAR yes 118264873
chr1 31221318 31221323 USF2 TRANSFAC yes 27875435
chr1 31221318 31221323 USF2 TRANSFAC yes 118264874
chr1 31221324 31221334 SP1 TRANSFAC yes 27875436
chr1 31221324 31221334 SP1 TRANSFAC yes 118264875
chr1 31221332 31221337 H4TF1 TRANSFAC yes 27875437
chr1 31221332 31221337 H4TF1 TRANSFAC yes 118264876
chr1 31221351 31221372 ZNF263 JASPAR yes 27875438
chr1 31221351 31221372 ZNF263 JASPAR yes 118264877
chr1 31221354 31221375 ZNF263 JASPAR yes 27875439
chr1 31221354 31221375 ZNF263 JASPAR yes 118264878
chr1 31221355 31221362 PEA3 TRANSFAC yes 27875440
chr1 31221355 31221362 PEA3 TRANSFAC yes 118264879
chr1 31221370 31221383 ZBTB18 JASPAR yes 27875441
chr1 31221370 31221383 ZBTB18 JASPAR yes 118264880
chr1 31221387 31221401 SPIC JASPAR yes 27875442
chr1 31221387 31221401 SPIC JASPAR yes 118264881
chr1 31221391 31221398 SPIB JASPAR yes 27875443
chr1 31221391 31221398 SPIB JASPAR yes 118264882
chr1 31221394 31221405 NFKB1 JASPAR yes 27875444
chr1 31221394 31221405 NFKB1 JASPAR yes 118264883
chr1 31221401 31221411 SP1 JASPAR yes 27875445
chr1 31221401 31221411 SP1 JASPAR yes 118264884
chr1 31221402 31221423 ZNF263 JASPAR yes 27875446
chr1 31221402 31221423 ZNF263 JASPAR yes 118264885
chr1 31221406 31221412 MZF1 JASPAR yes 27875447
chr1 31221406 31221412 MZF1 JASPAR yes 118264886
chr1 31221424 31221428 ESR1 TRANSFAC yes 27875448
chr1 31221424 31221428 ESR1 TRANSFAC yes 118264887
chr1 31221431 31221443 SRF JASPAR yes 27875449
chr1 31221431 31221443 SRF JASPAR yes 118264888
chr1 31221438 31221452 PLAG1 JASPAR yes 27875450
chr1 31221438 31221452 PLAG1 JASPAR yes 118264889
chr1 31221441 31221456 ZIC4 JASPAR yes 27875451
chr1 31221441 31221456 ZIC4 JASPAR yes 118264890
chr1 31221442 31221456 GLIS3 JASPAR yes 27875452
chr1 31221442 31221456 GLIS3 JASPAR yes 118264891
chr1 31221449 31221454 SP1 TRANSFAC yes 27875453
chr1 31221449 31221454 SP1 TRANSFAC yes 118264892
chr1 31221470 31221474 NFE TRANSFAC yes 27875454
chr1 31221470 31221474 NFE TRANSFAC yes 118264893
chr1 31221470 31221475 GATA1 TRANSFAC yes 27875455
chr1 31221470 31221475 GATA1 TRANSFAC yes 118264894
chr1 31221470 31221476 GATA3 JASPAR yes 27875456
chr1 31221470 31221476 GATA3 JASPAR yes 118264895
chr1 31221475 31221481 MZF1 JASPAR yes 27875457
chr1 31221475 31221481 MZF1 JASPAR yes 118264896
chr1 31221506 31221526 RREB1 JASPAR yes 27875458
chr1 31221506 31221526 RREB1 JASPAR yes 118264897
chr1 31221507 31221521 PLAG1 JASPAR yes 27875459
chr1 31221507 31221521 PLAG1 JASPAR yes 118264898
chr1 31221513 31221518 SP1 TRANSFAC yes 27875460
chr1 31221513 31221518 SP1 TRANSFAC yes 118264899
chr1 31221518 31221530 TEAD1 JASPAR yes 27875461
chr1 31221518 31221530 TEAD1 JASPAR yes 118264900
chr1 31221522 31221534 INSM1 JASPAR yes 27875462
chr1 31221522 31221534 INSM1 JASPAR yes 118264901
chr1 31221527 31221532 SP1 TRANSFAC yes 27875463
chr1 31221527 31221532 SP1 TRANSFAC yes 118264902
chr1 31221548 31221567 PAX5 JASPAR yes 27875464
chr1 31221548 31221567 PAX5 JASPAR yes 118264903
chr1 31221569 31221580 EBF1 JASPAR yes 27875465
chr1 31221569 31221580 EBF1 JASPAR yes 118264904
chr1 31221570 31221576 MZF1 JASPAR yes 27875466
chr1 31221570 31221576 MZF1 JASPAR yes 118264905
chr1 31221583 31221604 ZNF263 JASPAR yes 27875467
chr1 31221583 31221604 ZNF263 JASPAR yes 118264906
chr1 31221587 31221608 ZNF263 JASPAR yes 27875468
chr1 31221587 31221608 ZNF263 JASPAR yes 118264907
SNP sites on vista1038[chr1:31220962-31221590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31220995 rs371584502 G A,T
NR2F1 RXRB RXRG
205711
chr1 31220999 rs77548113 T C no 205712
chr1 31221038 rs527543036 C T no 205713
chr1 31221066 rs72876496 C T
GATA2
205714
chr1 31221218 rs556263954 C A
MZF1 NR2C2 SP1 TFAP2A TFAP2B TFAP2C ZNF263
205715
chr1 31221219 rs77578501 C G,T
MZF1 NR2C2 SP1 TFAP2A TFAP2B TFAP2C ZNF263
205716
chr1 31221512 rs147763685 A C,G
PLAG1 RREB1
205717
chr1 31221515 rs3790495 C T
PLAG1 RREB1 SP1
205718
chr1 31221525 rs373279157 C T
INSM1 RREB1 TEAD1
205719
chr1 31221542 rs139456282 C T no 205720
chr1 31221544 rs532990176 C A no 205721
chr1 31221552 rs190155852 C T
PAX5
205722
chr1 31221577 rs145274770 G A
EBF1
205723
Genes possibly regulated by vista1038[chr1:31220962-31221590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 75472
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 90923
Expression level of Genes
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miRNAs possibly regulated by vista1038[chr1:31220962-31221590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results