EnhancerDB
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  3. vista1040[chr1:31223594-31223943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1040[chr1:31223594-31223943]
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Tissue distribution of vista1040
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Transcription factor that possibly regulate vista1040[chr1:31223594-31223943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31223607 31223620 JUN JASPAR yes 27875733
chr1 31223607 31223620 JUN JASPAR yes 118264984
chr1 31223620 31223632 YY1 JASPAR yes 27875734
chr1 31223620 31223632 YY1 JASPAR yes 118264985
chr1 31223629 31223642 TFAP2A JASPAR yes 27875735
chr1 31223629 31223642 TFAP2A JASPAR yes 118264986
chr1 31223637 31223649 PKNOX1 JASPAR yes 27875736
chr1 31223637 31223649 PKNOX2 JASPAR yes 27875737
chr1 31223637 31223649 TGIF1 JASPAR yes 27875738
chr1 31223637 31223649 TGIF2 JASPAR yes 27875739
chr1 31223637 31223649 PKNOX1 JASPAR yes 118264987
chr1 31223637 31223649 PKNOX2 JASPAR yes 118264988
chr1 31223637 31223649 TGIF1 JASPAR yes 118264989
chr1 31223637 31223649 TGIF2 JASPAR yes 118264990
chr1 31223638 31223648 NHLH1 JASPAR yes 27875740
chr1 31223638 31223648 NHLH1 JASPAR yes 118264991
chr1 31223642 31223654 YY1 JASPAR yes 27875741
chr1 31223642 31223654 YY1 JASPAR yes 118264992
chr1 31223647 31223651 YY1 TRANSFAC yes 27875742
chr1 31223647 31223651 YY1 TRANSFAC yes 118264993
chr1 31223649 31223659 NFATC3 JASPAR yes 27875743
chr1 31223649 31223659 NFATC3 JASPAR yes 118264994
chr1 31223649 31223660 ETV2 JASPAR yes 27875744
chr1 31223649 31223660 ETV2 JASPAR yes 118264995
chr1 31223650 31223659 ELK4 JASPAR yes 27875745
chr1 31223650 31223659 ELK4 JASPAR yes 118264996
chr1 31223651 31223657 ETS1 JASPAR yes 27875746
chr1 31223651 31223657 ETS1 JASPAR yes 118264997
chr1 31223651 31223661 ELK1 JASPAR yes 27875747
chr1 31223651 31223661 ELK1 JASPAR yes 118264998
chr1 31223682 31223692 NKX2-3 JASPAR yes 27875748
chr1 31223682 31223692 NKX2-3 JASPAR yes 118264999
chr1 31223683 31223692 NKX2-8 JASPAR yes 27875749
chr1 31223683 31223692 NKX2-8 JASPAR yes 118265000
chr1 31223695 31223701 PEA3 TRANSFAC yes 27875750
chr1 31223695 31223701 PEA3 TRANSFAC yes 118265001
chr1 31223695 31223716 ZNF263 JASPAR yes 27875751
chr1 31223695 31223716 ZNF263 JASPAR yes 118265002
chr1 31223696 31223704 FEV JASPAR yes 27875752
chr1 31223696 31223704 FEV JASPAR yes 118265003
chr1 31223772 31223778 TCF4 TRANSFAC yes 27875753
chr1 31223772 31223778 TCF4 TRANSFAC yes 118265004
chr1 31223774 31223785 FLI1 JASPAR yes 27875754
chr1 31223774 31223785 FLI1 JASPAR yes 118265005
chr1 31223775 31223788 ELF1 JASPAR yes 27875755
chr1 31223775 31223788 ELF1 JASPAR yes 118265006
chr1 31223781 31223799 SRF JASPAR yes 27875756
chr1 31223781 31223799 SRF JASPAR yes 118265007
chr1 31223784 31223794 NOTO JASPAR yes 27875757
chr1 31223784 31223794 NOTO JASPAR yes 118265008
chr1 31223784 31223801 ZNF410 JASPAR yes 27875758
chr1 31223784 31223801 ZNF410 JASPAR yes 118265009
chr1 31223785 31223799 GLIS3 JASPAR yes 27875759
chr1 31223785 31223799 GLIS3 JASPAR yes 118265010
chr1 31223787 31223791 YY1 TRANSFAC yes 27875760
chr1 31223787 31223791 YY1 TRANSFAC yes 118265011
chr1 31223799 31223805 SOX10 JASPAR yes 27875761
chr1 31223799 31223805 SOX10 JASPAR yes 118265012
chr1 31223815 31223821 NFIC JASPAR yes 27875762
chr1 31223815 31223821 NFIC JASPAR yes 118265013
chr1 31223822 31223827 SP1 TRANSFAC yes 27875763
chr1 31223822 31223827 SP1 TRANSFAC yes 118265014
chr1 31223827 31223831 H4TF2 TRANSFAC yes 27875764
chr1 31223827 31223831 H4TF2 TRANSFAC yes 118265015
chr1 31223827 31223841 EBF1 JASPAR yes 27875765
chr1 31223827 31223841 EBF1 JASPAR yes 118265016
chr1 31223828 31223839 EBF1 JASPAR yes 27875766
chr1 31223828 31223839 EBF1 JASPAR yes 118265017
chr1 31223828 31223847 RFX2 JASPAR yes 27875767
chr1 31223828 31223847 RFX2 JASPAR yes 118265018
chr1 31223859 31223866 JUN TRANSFAC yes 27875768
chr1 31223859 31223866 JUN TRANSFAC yes 118265019
chr1 31223898 31223913 MEF2C JASPAR yes 27875769
chr1 31223898 31223913 MEF2C JASPAR yes 118265020
chr1 31223899 31223914 MEF2A JASPAR yes 27875770
chr1 31223899 31223914 MEF2A JASPAR yes 118265021
chr1 31223900 31223912 MEF2A JASPAR yes 27875771
chr1 31223900 31223912 MEF2D JASPAR yes 27875772
chr1 31223900 31223912 MEF2A JASPAR yes 118265022
chr1 31223900 31223912 MEF2D JASPAR yes 118265023
chr1 31223903 31223915 IRF1 JASPAR yes 27875773
chr1 31223903 31223915 IRF1 JASPAR yes 118265024
chr1 31223916 31223927 ELK4 JASPAR yes 27875774
chr1 31223916 31223927 FLI1 JASPAR yes 27875775
chr1 31223916 31223927 ELK4 JASPAR yes 118265025
chr1 31223916 31223927 FLI1 JASPAR yes 118265026
chr1 31223916 31223929 ELF3 JASPAR yes 27875776
chr1 31223916 31223929 ELF3 JASPAR yes 118265027
chr1 31223917 31223927 ETV6 JASPAR yes 27875777
chr1 31223917 31223927 GABPA JASPAR yes 27875778
chr1 31223917 31223927 ETV6 JASPAR yes 118265028
chr1 31223917 31223927 GABPA JASPAR yes 118265029
chr1 31223917 31223928 ELF5 JASPAR yes 27875779
chr1 31223917 31223928 ELF5 JASPAR yes 118265030
chr1 31223917 31223929 EHF JASPAR yes 27875780
chr1 31223917 31223929 ELF1 JASPAR yes 27875781
chr1 31223917 31223929 ELF4 JASPAR yes 27875782
chr1 31223917 31223929 EHF JASPAR yes 118265031
chr1 31223917 31223929 ELF1 JASPAR yes 118265032
chr1 31223917 31223929 ELF4 JASPAR yes 118265033
chr1 31223917 31223930 ELF1 JASPAR yes 27875783
chr1 31223917 31223930 ELF1 JASPAR yes 118265034
chr1 31223917 31223932 STAT1 JASPAR yes 27875784
chr1 31223917 31223932 STAT1 JASPAR yes 118265035
chr1 31223918 31223925 SPI1 JASPAR yes 27875785
chr1 31223918 31223925 SPI1 JASPAR yes 118265036
chr1 31223918 31223926 EHF JASPAR yes 27875786
chr1 31223918 31223926 FEV JASPAR yes 27875787
chr1 31223918 31223926 EHF JASPAR yes 118265037
chr1 31223918 31223926 FEV JASPAR yes 118265038
chr1 31223925 31223940 TFAP2A JASPAR yes 27875788
chr1 31223925 31223940 TFAP2A JASPAR yes 118265039
chr1 31223927 31223942 TFAP2A JASPAR yes 27875789
chr1 31223927 31223942 TFAP2C JASPAR yes 27875790
chr1 31223927 31223942 TFAP2A JASPAR yes 118265040
chr1 31223927 31223942 TFAP2C JASPAR yes 118265041
chr1 31223929 31223938 TFAP2A JASPAR yes 27875791
chr1 31223929 31223938 TFAP2A JASPAR yes 118265042
chr1 31223934 31223939 SP1 TRANSFAC yes 27875792
chr1 31223934 31223939 SP1 TRANSFAC yes 118265043
chr1 31223942 31223951 NFIX JASPAR yes 27875793
chr1 31223942 31223951 NFIX JASPAR yes 118265044
chr1 31223943 31223949 NFIC JASPAR yes 27875794
chr1 31223943 31223949 NFIC JASPAR yes 118265045
SNP sites on vista1040[chr1:31223594-31223943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31223632 rs142227967 C T
TFAP2A YY1
205770
chr1 31223636 rs566787565 C T
TFAP2A
205771
chr1 31223637 rs538896371 G A
PKNOX1 PKNOX2 TFAP2A TGIF1 TGIF2
205772
chr1 31223657 rs1188349 G A
ELK1 ELK4 ETS1 ETV2 NFATC3
205773
chr1 31223704 rs140301275 T C
FEV ZNF263
205774
chr1 31223744 rs573483338 G A no 205775
chr1 31223753 rs527537693 T A no 205776
chr1 31223916 rs547351789 C T
ELF3 ELK4 FLI1
205777
chr1 31223941 rs16834049 A G
TFAP2A TFAP2C
205778
Genes possibly regulated by vista1040[chr1:31223594-31223943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 72840
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 93276
Expression level of Genes
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miRNAs possibly regulated by vista1040[chr1:31223594-31223943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results