EnhancerDB
  1. Home
  2. Enhancers
  3. vista10407[chr11:59963490-59963874]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista10407[chr11:59963490-59963874]
Back to top
Tissue distribution of vista10407
Back to top
Transcription factor that possibly regulate vista10407[chr11:59963490-59963874]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 59963436 59963707 RUNX3 UCSC Txn Factor no Conserved 107971665
chr11 59963516 59963526 GSC2 JASPAR yes 39102352
chr11 59963516 59963526 GSC2 JASPAR yes 114076091
chr11 59963517 59963525 OTX1 JASPAR yes 39102353
chr11 59963517 59963525 OTX2 JASPAR yes 39102354
chr11 59963517 59963525 OTX1 JASPAR yes 114076092
chr11 59963517 59963525 OTX2 JASPAR yes 114076093
chr11 59963527 59963545 ESR2 JASPAR yes 39102355
chr11 59963527 59963545 ESR2 JASPAR yes 114076094
chr11 59963531 59963535 NFE TRANSFAC yes 39102356
chr11 59963531 59963535 NFE TRANSFAC yes 114076095
chr11 59963531 59963536 GATA1 TRANSFAC yes 39102357
chr11 59963531 59963536 GATA1 TRANSFAC yes 114076096
chr11 59963531 59963537 GATA3 JASPAR yes 39102358
chr11 59963531 59963537 GATA3 JASPAR yes 114076097
chr11 59963533 59963546 NR2F1 JASPAR yes 39102359
chr11 59963533 59963546 NR2F1 JASPAR yes 114076098
chr11 59963536 59963544 NR4A2 JASPAR yes 39102360
chr11 59963536 59963544 NR4A2 JASPAR yes 114076099
chr11 59963537 59963547 RORA JASPAR yes 39102361
chr11 59963537 59963547 RORA JASPAR yes 114076100
chr11 59963551 59963562 NFKB1 JASPAR yes 39102362
chr11 59963551 59963562 NFKB1 JASPAR yes 114076101
chr11 59963565 59963571 TCF4 TRANSFAC yes 39102363
chr11 59963565 59963571 TCF4 TRANSFAC yes 114076102
chr11 59963589 59963610 IRF1 JASPAR yes 39102364
chr11 59963589 59963610 IRF1 JASPAR yes 114076103
chr11 59963593 59963607 STAT1 JASPAR yes 39102365
chr11 59963593 59963607 STAT1 JASPAR yes 114076104
chr11 59963600 59963615 RUNX2 JASPAR yes 39102366
chr11 59963600 59963615 RUNX2 JASPAR yes 114076105
chr11 59963601 59963610 RUNX2 JASPAR yes 39102367
chr11 59963601 59963610 RUNX2 JASPAR yes 114076106
chr11 59963601 59963611 RUNX3 JASPAR yes 39102368
chr11 59963601 59963611 RUNX3 JASPAR yes 114076107
chr11 59963608 59963613 ETS2 TRANSFAC yes 39102369
chr11 59963608 59963613 ETS2 TRANSFAC yes 114076108
chr11 59963609 59963624 AR JASPAR yes 39102370
chr11 59963609 59963624 AR JASPAR yes 114076109
chr11 59963646 59963653 NKX3-1 JASPAR yes 39102371
chr11 59963646 59963653 NKX3-1 JASPAR yes 114076110
chr11 59963652 59963657 MYB TRANSFAC yes 39102372
chr11 59963652 59963657 MYB TRANSFAC yes 114076111
chr11 59963662 59963677 FOXP1 JASPAR yes 39102373
chr11 59963662 59963677 FOXP1 JASPAR yes 114076112
chr11 59963663 59963672 SRY JASPAR yes 39102374
chr11 59963663 59963672 SRY JASPAR yes 114076113
chr11 59963663 59963674 FOXP2 JASPAR yes 39102375
chr11 59963663 59963674 FOXP2 JASPAR yes 114076114
chr11 59963663 59963675 FOXC2 JASPAR yes 39102376
chr11 59963663 59963675 FOXC2 JASPAR yes 114076115
chr11 59963664 59963675 FOXC1 JASPAR yes 39102377
chr11 59963664 59963675 FOXC1 JASPAR yes 114076116
chr11 59963665 59963676 FOXA1 JASPAR yes 39102378
chr11 59963665 59963676 FOXA1 JASPAR yes 114076117
chr11 59963709 59963719 HMBOX1 JASPAR yes 39102379
chr11 59963709 59963719 HMBOX1 JASPAR yes 114076118
chr11 59963727 59963738 USF1 JASPAR yes 39102380
chr11 59963727 59963738 USF2 JASPAR yes 39102381
chr11 59963727 59963738 USF1 JASPAR yes 114076119
chr11 59963727 59963738 USF2 JASPAR yes 114076120
chr11 59963728 59963738 TFEC JASPAR yes 39102382
chr11 59963728 59963738 TFEC JASPAR yes 114076121
chr11 59963753 59963767 JUN JASPAR yes 39102383
chr11 59963753 59963767 JUN JASPAR yes 114076122
chr11 59963757 59963768 FOS JASPAR yes 39102384
chr11 59963757 59963768 FOSL1 JASPAR yes 39102385
chr11 59963757 59963768 JUND JASPAR yes 39102386
chr11 59963757 59963768 FOS JASPAR yes 114076123
chr11 59963757 59963768 FOSL1 JASPAR yes 114076124
chr11 59963757 59963768 JUND JASPAR yes 114076125
chr11 59963758 59963769 JUNB JASPAR yes 39102387
chr11 59963758 59963769 JUNB JASPAR yes 114076126
chr11 59963759 59963766 JUN TRANSFAC yes 39102388
chr11 59963759 59963766 JUN TRANSFAC yes 114076127
chr11 59963759 59963770 BATF JASPAR yes 39102389
chr11 59963759 59963770 BATF JASPAR yes 114076128
chr11 59963761 59963776 FOXP1 JASPAR yes 39102390
chr11 59963761 59963776 FOXP1 JASPAR yes 114076129
chr11 59963767 59963773 TBP TRANSFAC yes 39102391
chr11 59963767 59963773 TBP TRANSFAC yes 114076130
chr11 59963767 59963778 FOXC1 JASPAR yes 39102392
chr11 59963767 59963778 FOXC1 JASPAR yes 114076131
chr11 59963767 59963779 FOXC2 JASPAR yes 39102393
chr11 59963767 59963779 FOXC2 JASPAR yes 114076132
chr11 59963774 59963792 MAFF JASPAR yes 39102394
chr11 59963774 59963792 MAFF JASPAR yes 114076133
chr11 59963776 59963787 NRL JASPAR yes 39102395
chr11 59963776 59963787 NRL JASPAR yes 114076134
chr11 59963776 59963791 MAFK JASPAR yes 39102396
chr11 59963776 59963791 MAFK JASPAR yes 114076135
chr11 59963794 59963815 IRF1 JASPAR yes 39102397
chr11 59963794 59963815 IRF1 JASPAR yes 114076136
chr11 59963797 59963803 TCF1 TRANSFAC yes 39102398
chr11 59963797 59963803 TCF1 TRANSFAC yes 114076137
chr11 59963798 59963812 SPI1 JASPAR yes 39102399
chr11 59963798 59963812 SPIC JASPAR yes 39102400
chr11 59963798 59963812 SPI1 JASPAR yes 114076138
chr11 59963798 59963812 SPIC JASPAR yes 114076139
chr11 59963802 59963809 SPIB JASPAR yes 39102401
chr11 59963802 59963809 SPIB JASPAR yes 114076140
chr11 59963803 59963811 EHF JASPAR yes 39102402
chr11 59963803 59963811 EHF JASPAR yes 114076141
chr11 59963816 59963834 MAFF JASPAR yes 39102403
chr11 59963816 59963834 MAFF JASPAR yes 114076142
chr11 59963826 59963832 LEF1 TRANSFAC yes 39102404
chr11 59963826 59963832 SOX10 JASPAR yes 39102405
chr11 59963826 59963832 LEF1 TRANSFAC yes 114076143
chr11 59963826 59963832 SOX10 JASPAR yes 114076144
chr11 59963839 59963844 GATA1 TRANSFAC yes 39102406
chr11 59963839 59963844 GATA1 TRANSFAC yes 114076145
chr11 59963852 59963873 IRF1 JASPAR yes 39102407
chr11 59963852 59963873 IRF1 JASPAR yes 114076146
chr11 59963859 59963865 TCF4 TRANSFAC yes 39102408
chr11 59963859 59963865 TCF4 TRANSFAC yes 114076147
chr11 59963859 59963874 FOXP1 JASPAR yes 39102409
chr11 59963859 59963874 FOXP1 JASPAR yes 114076148
chr11 59963860 59963872 FOXC2 JASPAR yes 39102410
chr11 59963860 59963872 FOXC2 JASPAR yes 114076149
chr11 59963869 59963873 NFE TRANSFAC yes 39102411
chr11 59963869 59963873 NFE TRANSFAC yes 114076150
chr11 59963870 59963875 GATA2 JASPAR yes 39102412
chr11 59963870 59963875 GATA2 JASPAR yes 114076151
chr11 59963871 59963877 ZNF354C JASPAR yes 39102413
chr11 59963871 59963877 ZNF354C JASPAR yes 114076152
SNP sites on vista10407[chr11:59963490-59963874]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 59963564 rs145958332 C T
RUNX3
2019271
chr11 59963641 rs184830313 A G
RUNX3
2019272
chr11 59963873 rs183626205 T C
FOXP1 GATA2 IRF1 NFE ZNF354C
2019273
Genes possibly regulated by vista10407[chr11:59963490-59963874]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 59939081 59952139 - MS4A6A ENSG00000110077.10 59952139 0.87 1.0 10902 88649
chr11 59968726 60010561 - MS4A4E ENSG00000214787.4 60010561 0.92 1.0 10903 53313
chr11 60048014 60076445 + MS4A4A ENSG00000110079.12 60048014 0.86 1.0 10904 15860
Expression level of Genes
Back to top
miRNAs possibly regulated by vista10407[chr11:59963490-59963874]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results