EnhancerDB
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  3. vista1041[chr1:31227443-31228328]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1041[chr1:31227443-31228328]
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Tissue distribution of vista1041
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Transcription factor that possibly regulate vista1041[chr1:31227443-31228328]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31227435 31227450 HNF4A JASPAR yes 27876286
chr1 31227435 31227450 HNF4A JASPAR yes 118265046
chr1 31227436 31227451 HNF4G JASPAR yes 27876287
chr1 31227436 31227451 HNF4G JASPAR yes 118265047
chr1 31227451 31227465 ONECUT3 JASPAR yes 27876288
chr1 31227451 31227465 ONECUT3 JASPAR yes 118265048
chr1 31227460 31227475 MEF2C JASPAR yes 27876289
chr1 31227460 31227475 MEF2C JASPAR yes 118265049
chr1 31227461 31227482 IRF1 JASPAR yes 27876290
chr1 31227461 31227482 IRF1 JASPAR yes 118265050
chr1 31227464 31227470 TBP TRANSFAC yes 27876291
chr1 31227464 31227470 TBP TRANSFAC yes 118265051
chr1 31227465 31227479 SPIC JASPAR yes 27876292
chr1 31227465 31227479 STAT1 JASPAR yes 27876293
chr1 31227465 31227479 SPIC JASPAR yes 118265052
chr1 31227465 31227479 STAT1 JASPAR yes 118265053
chr1 31227465 31227480 PRDM1 JASPAR yes 27876294
chr1 31227465 31227480 STAT2 JASPAR yes 27876295
chr1 31227465 31227480 PRDM1 JASPAR yes 118265054
chr1 31227465 31227480 STAT2 JASPAR yes 118265055
chr1 31227465 31227486 IRF1 JASPAR yes 27876296
chr1 31227465 31227486 IRF1 JASPAR yes 118265056
chr1 31227469 31227484 PRDM1 JASPAR yes 27876297
chr1 31227469 31227484 PRDM1 JASPAR yes 118265057
chr1 31227503 31227521 ESR2 JASPAR yes 27876298
chr1 31227503 31227521 ESR2 JASPAR yes 118265058
chr1 31227504 31227519 ESR2 JASPAR yes 27876299
chr1 31227504 31227519 ESR2 JASPAR yes 118265059
chr1 31227512 31227526 RORA JASPAR yes 27876300
chr1 31227512 31227526 RORA JASPAR yes 118265060
chr1 31227601 31227604 MYB TRANSFAC yes 27876301
chr1 31227601 31227604 MYB TRANSFAC yes 118265061
chr1 31227603 31227608 SP1 TRANSFAC yes 27876302
chr1 31227603 31227608 SP1 TRANSFAC yes 118265062
chr1 31227609 31227622 ATF4 JASPAR yes 27876303
chr1 31227609 31227622 ATF4 JASPAR yes 118265063
chr1 31227610 31227621 FOS JASPAR yes 27876304
chr1 31227610 31227621 FOSL1 JASPAR yes 27876305
chr1 31227610 31227621 FOS JASPAR yes 118265064
chr1 31227610 31227621 FOSL1 JASPAR yes 118265065
chr1 31227611 31227620 JDP2 JASPAR yes 27876306
chr1 31227611 31227620 JDP2 JASPAR yes 118265066
chr1 31227612 31227631 PAX5 JASPAR yes 27876307
chr1 31227612 31227631 PAX5 JASPAR yes 118265067
chr1 31227632 31227636 NFE TRANSFAC yes 27876308
chr1 31227632 31227636 NFE TRANSFAC yes 118265068
chr1 31227641 31227647 YY1 JASPAR yes 27876309
chr1 31227641 31227647 YY1 JASPAR yes 118265069
chr1 31227659 31227662 MYB TRANSFAC yes 27876310
chr1 31227659 31227662 MYB TRANSFAC yes 118265070
chr1 31227665 31227676 EBF1 JASPAR yes 27876311
chr1 31227665 31227676 EBF1 JASPAR yes 118265071
chr1 31227671 31227686 HNF4G JASPAR yes 27876312
chr1 31227671 31227686 HNF4G JASPAR yes 118265072
chr1 31227672 31227687 HNF4A JASPAR yes 27876313
chr1 31227672 31227687 HNF4A JASPAR yes 118265073
chr1 31227673 31227678 SP1 TRANSFAC yes 27876314
chr1 31227673 31227678 SP1 TRANSFAC yes 118265074
chr1 31227677 31227696 REST JASPAR yes 27876315
chr1 31227677 31227696 REST JASPAR yes 118265075
chr1 31227680 31227695 MEF2C JASPAR yes 27876316
chr1 31227680 31227695 MEF2C JASPAR yes 118265076
chr1 31227698 31227719 MAFG JASPAR yes 27876317
chr1 31227698 31227719 MAFG JASPAR yes 118265077
chr1 31227710 31227727 PAX1 JASPAR yes 27876318
chr1 31227710 31227727 PAX9 JASPAR yes 27876319
chr1 31227710 31227727 PAX1 JASPAR yes 118265078
chr1 31227710 31227727 PAX9 JASPAR yes 118265079
chr1 31227711 31227730 PAX5 JASPAR yes 27876320
chr1 31227711 31227730 PAX5 JASPAR yes 118265080
chr1 31227725 31227729 H4TF2 TRANSFAC yes 27876321
chr1 31227725 31227729 H4TF2 TRANSFAC yes 118265081
chr1 31227732 31227740 MEIS2 JASPAR yes 27876322
chr1 31227732 31227740 MEIS3 JASPAR yes 27876323
chr1 31227732 31227740 MEIS2 JASPAR yes 118265082
chr1 31227732 31227740 MEIS3 JASPAR yes 118265083
chr1 31227749 31227760 FOXB1 JASPAR yes 27876324
chr1 31227749 31227760 FOXB1 JASPAR yes 118265084
chr1 31227755 31227768 ZBTB18 JASPAR yes 27876325
chr1 31227755 31227768 ZBTB18 JASPAR yes 118265085
chr1 31227778 31227788 NFATC3 JASPAR yes 27876326
chr1 31227778 31227788 NFATC3 JASPAR yes 118265086
chr1 31227779 31227786 NFATC2 JASPAR yes 27876327
chr1 31227779 31227786 NFATC2 JASPAR yes 118265087
chr1 31227784 31227797 ZBTB18 JASPAR yes 27876328
chr1 31227784 31227797 ZBTB18 JASPAR yes 118265088
chr1 31227799 31227803 H4TF2 TRANSFAC yes 27876329
chr1 31227799 31227803 H4TF2 TRANSFAC yes 118265089
chr1 31227803 31227807 NFE TRANSFAC yes 27876330
chr1 31227803 31227807 NFE TRANSFAC yes 118265090
chr1 31227809 31227818 ZEB1 JASPAR yes 27876331
chr1 31227809 31227818 ZEB1 JASPAR yes 118265091
chr1 31227809 31227824 SCRT1 JASPAR yes 27876332
chr1 31227809 31227824 SCRT1 JASPAR yes 118265092
chr1 31227810 31227820 FIGLA JASPAR yes 27876333
chr1 31227810 31227820 ID4 JASPAR yes 27876334
chr1 31227810 31227820 MSC JASPAR yes 27876335
chr1 31227810 31227820 MYF6 JASPAR yes 27876336
chr1 31227810 31227820 TCF3 JASPAR yes 27876337
chr1 31227810 31227820 TCF4 JASPAR yes 27876338
chr1 31227810 31227820 FIGLA JASPAR yes 118265093
chr1 31227810 31227820 ID4 JASPAR yes 118265094
chr1 31227810 31227820 MSC JASPAR yes 118265095
chr1 31227810 31227820 MYF6 JASPAR yes 118265096
chr1 31227810 31227820 TCF3 JASPAR yes 118265097
chr1 31227810 31227820 TCF4 JASPAR yes 118265098
chr1 31227811 31227820 SNAI2 JASPAR yes 27876339
chr1 31227811 31227820 SNAI2 JASPAR yes 118265099
chr1 31227811 31227824 SCRT2 JASPAR yes 27876340
chr1 31227811 31227824 SCRT2 JASPAR yes 118265100
chr1 31227812 31227817 USF2 TRANSFAC yes 27876341
chr1 31227812 31227817 USF2 TRANSFAC yes 118265101
chr1 31227813 31227819 PTF TRANSFAC yes 27876342
chr1 31227813 31227819 PTF TRANSFAC yes 118265102
chr1 31227833 31227844 NFKB1 JASPAR yes 27876343
chr1 31227833 31227844 NFKB1 JASPAR yes 118265103
chr1 31227833 31227846 NFKB1 JASPAR yes 27876344
chr1 31227833 31227846 NFKB2 JASPAR yes 27876345
chr1 31227833 31227846 NFKB1 JASPAR yes 118265104
chr1 31227833 31227846 NFKB2 JASPAR yes 118265105
chr1 31227834 31227845 NFKB1 JASPAR yes 27876346
chr1 31227834 31227845 NFKB1 JASPAR yes 118265106
chr1 31227835 31227845 NFKB1 JASPAR yes 27876347
chr1 31227835 31227845 RELA JASPAR yes 27876348
chr1 31227835 31227845 REL JASPAR yes 27876349
chr1 31227835 31227845 NFKB1 JASPAR yes 118265107
chr1 31227835 31227845 RELA JASPAR yes 118265108
chr1 31227835 31227845 REL JASPAR yes 118265109
chr1 31227837 31227852 TFAP2A JASPAR yes 27876350
chr1 31227837 31227852 TFAP2C JASPAR yes 27876351
chr1 31227837 31227852 TFAP2A JASPAR yes 118265110
chr1 31227837 31227852 TFAP2C JASPAR yes 118265111
chr1 31227839 31227851 INSM1 JASPAR yes 27876352
chr1 31227839 31227851 TFAP2A JASPAR yes 27876353
chr1 31227839 31227851 TFAP2B JASPAR yes 27876354
chr1 31227839 31227851 TFAP2C JASPAR yes 27876355
chr1 31227839 31227851 INSM1 JASPAR yes 118265112
chr1 31227839 31227851 TFAP2A JASPAR yes 118265113
chr1 31227839 31227851 TFAP2B JASPAR yes 118265114
chr1 31227839 31227851 TFAP2C JASPAR yes 118265115
chr1 31227839 31227854 TFAP2A JASPAR yes 27876356
chr1 31227839 31227854 TFAP2A JASPAR yes 118265116
chr1 31227841 31227850 TFAP2A JASPAR yes 27876357
chr1 31227841 31227850 TFAP2A JASPAR yes 118265117
chr1 31227851 31227869 SRF JASPAR yes 27876358
chr1 31227851 31227869 SRF JASPAR yes 118265118
chr1 31227855 31227870 STAT1 JASPAR yes 27876359
chr1 31227855 31227870 STAT1 JASPAR yes 118265119
chr1 31227857 31227868 STAT1 JASPAR yes 27876360
chr1 31227857 31227868 STAT3 JASPAR yes 27876361
chr1 31227857 31227868 STAT1 JASPAR yes 118265120
chr1 31227857 31227868 STAT3 JASPAR yes 118265121
chr1 31227858 31227866 STAT6 TRANSFAC yes 27876362
chr1 31227858 31227866 STAT6 TRANSFAC yes 118265122
chr1 31227862 31227867 ETS2 TRANSFAC yes 27876363
chr1 31227862 31227867 ETS2 TRANSFAC yes 118265123
chr1 31227898 31227901 MYB TRANSFAC yes 27876364
chr1 31227898 31227901 MYB TRANSFAC yes 118265124
chr1 31227899 31227909 ZNF740 JASPAR yes 27876365
chr1 31227899 31227909 ZNF740 JASPAR yes 118265125
chr1 31227945 31227959 MTF1 JASPAR yes 27876366
chr1 31227945 31227959 MTF1 JASPAR yes 118265126
chr1 31227967 31227982 ZIC3 JASPAR yes 27876367
chr1 31227967 31227982 ZIC3 JASPAR yes 118265127
chr1 31227980 31228001 ZNF263 JASPAR yes 27876368
chr1 31227980 31228001 ZNF263 JASPAR yes 118265128
chr1 31228043 31228061 E2F3 JASPAR yes 27876369
chr1 31228043 31228061 E2F3 JASPAR yes 118265129
chr1 31228044 31228049 NFY TRANSFAC yes 27876370
chr1 31228044 31228049 NFY TRANSFAC yes 118265130
chr1 31228056 31228059 MYB TRANSFAC yes 27876371
chr1 31228056 31228059 MYB TRANSFAC yes 118265131
chr1 31228066 31228070 YY1 TRANSFAC yes 27876372
chr1 31228066 31228070 YY1 TRANSFAC yes 118265132
chr1 31228067 31228078 RUNX1 JASPAR yes 27876373
chr1 31228067 31228078 RUNX1 JASPAR yes 118265133
chr1 31228069 31228083 GATA2 JASPAR yes 27876374
chr1 31228069 31228083 GATA2 JASPAR yes 118265134
chr1 31228079 31228089 NKX2-3 JASPAR yes 27876375
chr1 31228079 31228089 NKX2-3 JASPAR yes 118265135
chr1 31228084 31228094 SP1 JASPAR yes 27876376
chr1 31228084 31228094 SP1 JASPAR yes 118265136
chr1 31228102 31228106 LFA1 TRANSFAC yes 27876377
chr1 31228102 31228106 LFA1 TRANSFAC yes 118265137
chr1 31228116 31228121 GATA1 TRANSFAC yes 27876378
chr1 31228116 31228121 GATA1 TRANSFAC yes 118265138
chr1 31228149 31228159 ETV6 JASPAR yes 27876379
chr1 31228149 31228159 ETV6 JASPAR yes 118265139
chr1 31228149 31228163 SPI1 JASPAR yes 27876380
chr1 31228149 31228163 SPI1 JASPAR yes 118265140
chr1 31228150 31228157 SPI1 JASPAR yes 27876381
chr1 31228150 31228157 SPI1 JASPAR yes 118265141
chr1 31228150 31228158 EHF JASPAR yes 27876382
chr1 31228150 31228158 EHF JASPAR yes 118265142
chr1 31228152 31228159 SPIB JASPAR yes 27876383
chr1 31228152 31228159 SPIB JASPAR yes 118265143
chr1 31228158 31228161 MYB TRANSFAC yes 27876384
chr1 31228158 31228161 MYB TRANSFAC yes 118265144
chr1 31228191 31228196 GATA2 JASPAR yes 27876385
chr1 31228191 31228196 GATA2 JASPAR yes 118265145
chr1 31228193 31228210 ZNF410 JASPAR yes 27876386
chr1 31228193 31228210 ZNF410 JASPAR yes 118265146
chr1 31228196 31228211 MEF2A JASPAR yes 27876387
chr1 31228196 31228211 MEF2A JASPAR yes 118265147
chr1 31228256 31228277 ZNF263 JASPAR yes 27876388
chr1 31228256 31228277 ZNF263 JASPAR yes 118265148
chr1 31228259 31228269 TBR1 JASPAR yes 27876389
chr1 31228259 31228269 TBR1 JASPAR yes 118265149
chr1 31228259 31228270 TBX2 JASPAR yes 27876390
chr1 31228259 31228270 TBX2 JASPAR yes 118265150
chr1 31228271 31228277 MZF1 JASPAR yes 27876391
chr1 31228271 31228277 MZF1 JASPAR yes 118265151
chr1 31228321 31228332 YY2 JASPAR yes 27876392
chr1 31228321 31228332 YY2 JASPAR yes 118265152
SNP sites on vista1041[chr1:31227443-31228328]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31227466 rs186257577 A T
IRF1 MEF2C PRDM1 SPIC STAT1 STAT2 TBP
205829
chr1 31227502 rs571068840 T C,G no 205830
chr1 31227851 rs144621213 C T
INSM1 SRF TFAP2A TFAP2B TFAP2C
205831
chr1 31227938 rs6685063 G C no 205832
chr1 31228047 rs114504145 T C,G
E2F3 NFY
205833
chr1 31228162 rs74063217 C T
SPI1
205834
chr1 31228198 rs6685295 G C
MEF2A ZNF410
205835
Genes possibly regulated by vista1041[chr1:31227443-31228328]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 68991
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 97661
Expression level of Genes
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miRNAs possibly regulated by vista1041[chr1:31227443-31228328]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 39797697 39797718 + hsa-miR-6871-3p MIMAT0027643 39766182 0.1441152805595948 0.839655 0.0 1043
Expression level of miRNAs
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