EnhancerDB
  1. Home
  2. Enhancers
  3. vista1044[chr1:31233848-31234393]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1044[chr1:31233848-31234393]
Back to top
Tissue distribution of vista1044
Back to top
Transcription factor that possibly regulate vista1044[chr1:31233848-31234393]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31233853 31233873 RREB1 JASPAR yes 118265227
chr1 31233870 31233882 FOXC2 JASPAR yes 118265228
chr1 31233870 31233882 MEF2A JASPAR yes 118265229
chr1 31233870 31233882 MEF2B JASPAR yes 118265230
chr1 31233870 31233882 MEF2D JASPAR yes 118265231
chr1 31233871 31233881 MEF2A JASPAR yes 118265232
chr1 31233871 31233882 FOXB1 JASPAR yes 118265233
chr1 31233871 31233882 FOXC1 JASPAR yes 118265234
chr1 31233872 31233876 YY1 TRANSFAC yes 118265235
chr1 31233886 31233894 FOXO3 JASPAR yes 118265236
chr1 31233887 31233897 NFATC3 JASPAR yes 118265237
chr1 31233889 31233895 ETS1 JASPAR yes 118265238
chr1 31233902 31233908 GATA1 TRANSFAC yes 118265239
chr1 31233942 31233948 SOX10 JASPAR yes 118265240
chr1 31233981 31233994 DUXA JASPAR yes 118265241
chr1 31233991 31234005 GATA2 JASPAR yes 118265242
chr1 31233993 31234001 GATA3 JASPAR yes 118265243
chr1 31233993 31234001 GATA5 JASPAR yes 118265244
chr1 31233999 31234012 ELF1 JASPAR yes 118265245
chr1 31234001 31234012 ELF5 JASPAR yes 118265246
chr1 31234003 31234008 ETS2 TRANSFAC yes 118265247
chr1 31234003 31234011 FEV JASPAR yes 118265248
chr1 31234053 31234071 ESR2 JASPAR yes 118265249
chr1 31234054 31234069 ESR2 JASPAR yes 118265250
chr1 31234054 31234074 ESR1 JASPAR yes 118265251
chr1 31234061 31234072 ESRRA JASPAR yes 118265252
chr1 31234074 31234089 MEF2A JASPAR yes 118265253
chr1 31234075 31234090 MEF2C JASPAR yes 118265254
chr1 31234078 31234082 YY1 TRANSFAC yes 118265255
chr1 31234086 31234092 SOX10 JASPAR yes 118265256
chr1 31234089 31234094 ETS2 TRANSFAC yes 118265257
chr1 31234149 31234157 OTX1 JASPAR yes 118265258
chr1 31234149 31234157 OTX2 JASPAR yes 118265259
chr1 31234188 31234203 HNF1A JASPAR yes 118265260
chr1 31234189 31234202 HNF1B JASPAR yes 118265261
chr1 31234211 31234224 POU2F2 JASPAR yes 118265262
chr1 31234213 31234227 POU4F1 JASPAR yes 118265263
chr1 31234213 31234229 POU4F2 JASPAR yes 118265264
chr1 31234213 31234229 POU4F3 JASPAR yes 118265265
chr1 31234218 31234222 YY1 TRANSFAC yes 118265266
chr1 31234270 31234276 LEF1 TRANSFAC yes 118265267
chr1 31234270 31234276 SOX10 JASPAR yes 118265268
chr1 31234295 31234306 NFKB1 JASPAR yes 118265269
chr1 31234296 31234306 NFKB1 JASPAR yes 118265270
chr1 31234296 31234306 REL JASPAR yes 118265271
chr1 31234317 31234332 TFAP2C JASPAR yes 118265272
chr1 31234324 31234339 MEF2C JASPAR yes 118265273
chr1 31234324 31234345 IRF1 JASPAR yes 118265274
chr1 31234325 31234340 MEF2A JASPAR yes 118265275
chr1 31234326 31234338 MEF2A JASPAR yes 118265276
chr1 31234328 31234343 STAT2 JASPAR yes 118265277
chr1 31234328 31234346 IRF2 JASPAR yes 118265278
chr1 31234329 31234341 IRF1 JASPAR yes 118265279
chr1 31234350 31234360 MSC JASPAR yes 118265280
chr1 31234361 31234365 YY1 TRANSFAC yes 118265281
chr1 31234364 31234373 SRY JASPAR yes 118265282
chr1 31234368 31234374 SOX10 JASPAR yes 118265283
SNP sites on vista1044[chr1:31233848-31234393]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31233919 rs150797395 T C,G no 205903
chr1 31233962 rs139440610 C G no 205904
chr1 31234304 rs142546386 C A
NFKB1 REL
205905
chr1 31234356 rs145990358 C G,T
MSC
205906
Genes possibly regulated by vista1044[chr1:31233848-31234393]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 62586
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 96819
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1044[chr1:31233848-31234393]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 39797697 39797718 + hsa-miR-6871-3p MIMAT0027643 39766182 0.1607911110190886 0.839655 0.0 1043
Expression level of miRNAs
Back to top