EnhancerDB
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  3. vista1047[chr1:31238817-31239233]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1047[chr1:31238817-31239233]
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Tissue distribution of vista1047
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Transcription factor that possibly regulate vista1047[chr1:31238817-31239233]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31238828 31238843 TFAP2A JASPAR yes 27876728
chr1 31238828 31238843 TFAP2C JASPAR yes 27876729
chr1 31238828 31238843 TFAP2A JASPAR yes 118265381
chr1 31238828 31238843 TFAP2C JASPAR yes 118265382
chr1 31238834 31238852 ESR1 JASPAR yes 27876730
chr1 31238834 31238852 ESR1 JASPAR yes 118265383
chr1 31238862 31238871 SP1 TRANSFAC yes 27876731
chr1 31238862 31238871 SP1 TRANSFAC yes 118265384
chr1 31238863 31238883 RREB1 JASPAR yes 27876732
chr1 31238863 31238883 RREB1 JASPAR yes 118265385
chr1 31238883 31238897 E2F7 JASPAR yes 27876733
chr1 31238883 31238897 E2F7 JASPAR yes 118265386
chr1 31238886 31238897 E2F6 JASPAR yes 27876734
chr1 31238886 31238897 E2F6 JASPAR yes 118265387
chr1 31238894 31238914 RREB1 JASPAR yes 27876735
chr1 31238894 31238914 RREB1 JASPAR yes 118265388
chr1 31238896 31238916 RREB1 JASPAR yes 27876736
chr1 31238896 31238916 RREB1 JASPAR yes 118265389
chr1 31238897 31238907 ZNF740 JASPAR yes 27876737
chr1 31238897 31238907 ZNF740 JASPAR yes 118265390
chr1 31238900 31238920 RREB1 JASPAR yes 27876738
chr1 31238900 31238920 RREB1 JASPAR yes 118265391
chr1 31238901 31238913 FOXI1 JASPAR yes 27876739
chr1 31238901 31238913 FOXI1 JASPAR yes 118265392
chr1 31238902 31238917 RUNX2 JASPAR yes 27876740
chr1 31238902 31238917 RUNX2 JASPAR yes 118265393
chr1 31238905 31238916 RUNX1 JASPAR yes 27876741
chr1 31238905 31238916 RUNX1 JASPAR yes 118265394
chr1 31238906 31238916 RUNX3 JASPAR yes 27876742
chr1 31238906 31238916 RUNX3 JASPAR yes 118265395
chr1 31238907 31238916 RUNX2 JASPAR yes 27876743
chr1 31238907 31238916 RUNX2 JASPAR yes 118265396
chr1 31238921 31238932 YY2 JASPAR yes 27876744
chr1 31238921 31238932 YY2 JASPAR yes 118265397
chr1 31238927 31238931 YY1 TRANSFAC yes 27876745
chr1 31238927 31238931 YY1 TRANSFAC yes 118265398
chr1 31238930 31238946 ZNF143 JASPAR yes 27876746
chr1 31238930 31238946 ZNF143 JASPAR yes 118265399
chr1 31238941 31238945 NFE TRANSFAC yes 27876747
chr1 31238941 31238945 NFE TRANSFAC yes 118265400
chr1 31238941 31238946 GATA1 TRANSFAC yes 27876748
chr1 31238941 31238946 GATA1 TRANSFAC yes 118265401
chr1 31238941 31238947 GATA3 JASPAR yes 27876749
chr1 31238941 31238947 GATA3 JASPAR yes 118265402
chr1 31238955 31238959 YY1 TRANSFAC yes 27876750
chr1 31238955 31238959 YY1 TRANSFAC yes 118265403
chr1 31238956 31238966 NFATC3 JASPAR yes 27876751
chr1 31238956 31238966 NFATC3 JASPAR yes 118265404
chr1 31238957 31238964 NFATC2 JASPAR yes 27876752
chr1 31238957 31238964 NFATC2 JASPAR yes 118265405
chr1 31238970 31238982 NHLH1 JASPAR yes 27876753
chr1 31238970 31238982 NHLH1 JASPAR yes 118265406
chr1 31238971 31238981 NHLH1 JASPAR yes 27876754
chr1 31238971 31238981 NHLH1 JASPAR yes 118265407
chr1 31238979 31238985 TCF4 TRANSFAC yes 27876755
chr1 31238979 31238985 TCF4 TRANSFAC yes 118265408
chr1 31238999 31239003 NFE TRANSFAC yes 27876756
chr1 31238999 31239003 NFE TRANSFAC yes 118265409
chr1 31239011 31239021 SP1 JASPAR yes 27876757
chr1 31239011 31239021 SP1 JASPAR yes 118265410
chr1 31239011 31239032 ZNF263 JASPAR yes 27876758
chr1 31239011 31239032 ZNF263 JASPAR yes 118265411
chr1 31239012 31239019 CEBPA TRANSFAC yes 27876759
chr1 31239012 31239019 CEBPA TRANSFAC yes 118265412
chr1 31239031 31239042 NRF1 JASPAR yes 27876760
chr1 31239031 31239042 NRF1 JASPAR yes 118265413
chr1 31239035 31239041 NFE2 TRANSFAC yes 27876761
chr1 31239035 31239041 NFE2 TRANSFAC yes 118265414
chr1 31239036 31239049 TFAP2A JASPAR yes 27876762
chr1 31239036 31239049 TFAP2B JASPAR yes 27876763
chr1 31239036 31239049 TFAP2C JASPAR yes 27876764
chr1 31239036 31239049 TFAP2A JASPAR yes 118265415
chr1 31239036 31239049 TFAP2B JASPAR yes 118265416
chr1 31239036 31239049 TFAP2C JASPAR yes 118265417
chr1 31239045 31239055 NFKB1 JASPAR yes 27876765
chr1 31239045 31239055 RELA JASPAR yes 27876766
chr1 31239045 31239055 NFKB1 JASPAR yes 118265418
chr1 31239045 31239055 RELA JASPAR yes 118265419
chr1 31239045 31239056 NFKB1 JASPAR yes 27876767
chr1 31239045 31239056 NFKB1 JASPAR yes 118265420
chr1 31239067 31239084 RARA JASPAR yes 27876768
chr1 31239067 31239084 RXRA JASPAR yes 27876769
chr1 31239067 31239084 RARA JASPAR yes 118265421
chr1 31239067 31239084 RXRA JASPAR yes 118265422
chr1 31239068 31239072 ESR1 TRANSFAC yes 27876770
chr1 31239068 31239072 ESR1 TRANSFAC yes 118265423
chr1 31239097 31239101 LFA1 TRANSFAC yes 27876771
chr1 31239097 31239101 LFA1 TRANSFAC yes 118265424
chr1 31239192 31239207 STAT1 JASPAR yes 27876772
chr1 31239192 31239207 STAT1 JASPAR yes 118265425
chr1 31239192 31239209 RXRA JASPAR yes 27876773
chr1 31239192 31239209 RXRA JASPAR yes 118265426
chr1 31239194 31239205 STAT1 JASPAR yes 27876774
chr1 31239194 31239205 STAT1 JASPAR yes 118265427
chr1 31239197 31239207 ETV3 JASPAR yes 27876775
chr1 31239197 31239207 ETV3 JASPAR yes 118265428
chr1 31239207 31239211 YY1 TRANSFAC yes 27876776
chr1 31239207 31239211 YY1 TRANSFAC yes 118265429
chr1 31239210 31239225 HNF4A JASPAR yes 27876777
chr1 31239210 31239225 HNF4A JASPAR yes 118265430
chr1 31239211 31239226 HNF4G JASPAR yes 27876778
chr1 31239211 31239226 HNF4G JASPAR yes 118265431
SNP sites on vista1047[chr1:31238817-31239233]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31238917 rs75829056 G T
RREB1 RUNX2
205965
chr1 31239032 rs535779129 G A,T
NRF1 ZNF263
205966
chr1 31239154 rs139323181 G A no 205967
chr1 31239226 rs575887324 AG A
HNF4G
205968
Genes possibly regulated by vista1047[chr1:31238817-31239233]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 57617
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 91850
Expression level of Genes
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miRNAs possibly regulated by vista1047[chr1:31238817-31239233]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results