EnhancerDB
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  3. vista10480[chr11:61780516-61780626]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista10480[chr11:61780516-61780626]
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Tissue distribution of vista10480
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Transcription factor that possibly regulate vista10480[chr11:61780516-61780626]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 61780090 61781591 POLR2A UCSC Txn Factor no Conserved 107973542
chr11 61780090 61781591 POLR2A UCSC Txn Factor no Conserved 107973543
chr11 61780509 61780778 TFAP2C UCSC Txn Factor no Conserved 107973568
chr11 61780520 61780524 LFA1 TRANSFAC yes 39178792
chr11 61780520 61780524 LFA1 TRANSFAC yes 114079530
chr11 61780527 61780532 SP1 TRANSFAC yes 39178793
chr11 61780527 61780532 SP1 TRANSFAC yes 114079531
chr11 61780528 61780538 SP1 JASPAR yes 39178794
chr11 61780528 61780538 SP1 JASPAR yes 114079532
chr11 61780530 61780534 LFA1 TRANSFAC yes 39178795
chr11 61780530 61780534 LFA1 TRANSFAC yes 114079533
chr11 61780535 61780540 ETS2 TRANSFAC yes 39178796
chr11 61780535 61780540 ETS2 TRANSFAC yes 114079534
chr11 61780551 61780566 ZIC4 JASPAR yes 39178797
chr11 61780551 61780566 ZIC4 JASPAR yes 114079535
chr11 61780558 61780572 JUN JASPAR yes 39178798
chr11 61780558 61780572 JUN JASPAR yes 114079536
chr11 61780561 61780572 FOSL2 JASPAR yes 39178799
chr11 61780561 61780572 JUNB JASPAR yes 39178800
chr11 61780561 61780572 FOSL2 JASPAR yes 114079537
chr11 61780561 61780572 JUNB JASPAR yes 114079538
chr11 61780562 61780573 FOS JASPAR yes 39178801
chr11 61780562 61780573 FOSL1 JASPAR yes 39178802
chr11 61780562 61780573 JUND JASPAR yes 39178803
chr11 61780562 61780573 FOS JASPAR yes 114079539
chr11 61780562 61780573 FOSL1 JASPAR yes 114079540
chr11 61780562 61780573 JUND JASPAR yes 114079541
chr11 61780563 61780570 JUN TRANSFAC yes 39178804
chr11 61780563 61780570 JUN TRANSFAC yes 114079542
chr11 61780563 61780577 JUN JASPAR yes 39178805
chr11 61780563 61780577 JUN JASPAR yes 114079543
chr11 61780564 61780575 BATF JASPAR yes 39178806
chr11 61780564 61780575 BATF JASPAR yes 114079544
SNP sites on vista10480[chr11:61780516-61780626]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 61780560 rs1010216 G A,C
JUN POLR2A TFAP2C ZIC4
2028634
chr11 61780589 rs548712547 C T
POLR2A TFAP2C
2028635
chr11 61780612 rs138462503 G A
POLR2A TFAP2C
2028636
chr11 61780623 rs12271166 C A
POLR2A TFAP2C
2028637
Genes possibly regulated by vista10480[chr11:61780516-61780626]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 61664773 61687741 - RAB3IL1 ENSG00000167994.7 61687741 0.81 1.0 10948 7225
chr11 61717293 61732987 + BEST1 ENSG00000167995.11 61717293 0.82 1.0 10949 36777
chr11 61727190 61735132 - FTH1 ENSG00000167996.11 61735132 0.62 0.99 10950 54616
chr11 61735453 61736755 + AP003733.1 ENSG00000269089.1 61735453 0.8 1.0 10951 54937
Expression level of Genes
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miRNAs possibly regulated by vista10480[chr11:61780516-61780626]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results