EnhancerDB
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  3. vista1050[chr1:31250426-31250582]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1050[chr1:31250426-31250582]
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Tissue distribution of vista1050
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Transcription factor that possibly regulate vista1050[chr1:31250426-31250582]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31250428 31250432 NFE TRANSFAC yes 27877911
chr1 31250428 31250432 NFE TRANSFAC yes 118265553
chr1 31250430 31250441 EBF1 JASPAR yes 27877912
chr1 31250430 31250441 EBF1 JASPAR yes 118265554
chr1 31250437 31250442 SP1 TRANSFAC yes 27877913
chr1 31250437 31250442 SP1 TRANSFAC yes 118265555
chr1 31250437 31250451 PLAG1 JASPAR yes 27877914
chr1 31250437 31250451 PLAG1 JASPAR yes 118265556
chr1 31250455 31250465 NFKB1 JASPAR yes 27877915
chr1 31250455 31250465 RELA JASPAR yes 27877916
chr1 31250455 31250465 REL JASPAR yes 27877917
chr1 31250455 31250465 NFKB1 JASPAR yes 118265557
chr1 31250455 31250465 RELA JASPAR yes 118265558
chr1 31250455 31250465 REL JASPAR yes 118265559
chr1 31250455 31250466 NFKB1 JASPAR yes 27877918
chr1 31250455 31250466 NFKB1 JASPAR yes 118265560
chr1 31250470 31250484 POU1F1 JASPAR yes 27877919
chr1 31250470 31250484 POU1F1 JASPAR yes 118265561
chr1 31250471 31250483 POU3F1 JASPAR yes 27877920
chr1 31250471 31250483 POU3F2 JASPAR yes 27877921
chr1 31250471 31250483 POU3F1 JASPAR yes 118265562
chr1 31250471 31250483 POU3F2 JASPAR yes 118265563
chr1 31250471 31250484 POU3F3 JASPAR yes 27877922
chr1 31250471 31250484 POU3F3 JASPAR yes 118265564
chr1 31250472 31250484 POU2F1 JASPAR yes 27877923
chr1 31250472 31250484 POU2F1 JASPAR yes 118265565
chr1 31250473 31250482 POU3F4 JASPAR yes 27877924
chr1 31250473 31250482 POU5F1B JASPAR yes 27877925
chr1 31250473 31250482 POU3F4 JASPAR yes 118265566
chr1 31250473 31250482 POU5F1B JASPAR yes 118265567
chr1 31250485 31250497 PKNOX1 JASPAR yes 27877926
chr1 31250485 31250497 PKNOX2 JASPAR yes 27877927
chr1 31250485 31250497 TGIF1 JASPAR yes 27877928
chr1 31250485 31250497 TGIF2 JASPAR yes 27877929
chr1 31250485 31250497 PKNOX1 JASPAR yes 118265568
chr1 31250485 31250497 PKNOX2 JASPAR yes 118265569
chr1 31250485 31250497 TGIF1 JASPAR yes 118265570
chr1 31250485 31250497 TGIF2 JASPAR yes 118265571
chr1 31250486 31250496 MSC JASPAR yes 27877930
chr1 31250486 31250496 MYF6 JASPAR yes 27877931
chr1 31250486 31250496 NHLH1 JASPAR yes 27877932
chr1 31250486 31250496 MSC JASPAR yes 118265572
chr1 31250486 31250496 MYF6 JASPAR yes 118265573
chr1 31250486 31250496 NHLH1 JASPAR yes 118265574
chr1 31250491 31250495 NFE TRANSFAC yes 27877933
chr1 31250491 31250495 NFE TRANSFAC yes 118265575
chr1 31250493 31250504 NRL JASPAR yes 27877934
chr1 31250493 31250504 NRL JASPAR yes 118265576
chr1 31250514 31250529 MYBL2 JASPAR yes 27877935
chr1 31250514 31250529 MYBL2 JASPAR yes 118265577
chr1 31250536 31250547 STAT3 JASPAR yes 27877936
chr1 31250536 31250547 STAT3 JASPAR yes 118265578
chr1 31250578 31250593 RFX5 JASPAR yes 27877937
chr1 31250578 31250593 RFX5 JASPAR yes 118265579
SNP sites on vista1050[chr1:31250426-31250582]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31250525 rs75355834 C T
MYBL2
206117
chr1 31250541 rs534682284 T C
STAT3
206118
Genes possibly regulated by vista1050[chr1:31250426-31250582]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 46008
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 80241
Expression level of Genes
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miRNAs possibly regulated by vista1050[chr1:31250426-31250582]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results