EnhancerDB
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  3. vista1051[chr1:31251287-31251533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1051[chr1:31251287-31251533]
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Tissue distribution of vista1051
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Transcription factor that possibly regulate vista1051[chr1:31251287-31251533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31250742 31252811 POLR2A UCSC Txn Factor no Conserved 107802707
chr1 31250742 31252811 POLR2A UCSC Txn Factor no Conserved 107802708
chr1 31251287 31251297 MAX JASPAR yes 27878031
chr1 31251287 31251297 MAX JASPAR yes 118265580
chr1 31251298 31251312 PAX6 JASPAR yes 27878032
chr1 31251298 31251312 PAX6 JASPAR yes 118265581
chr1 31251314 31251334 ESR1 JASPAR yes 27878033
chr1 31251314 31251334 ESR1 JASPAR yes 118265582
chr1 31251317 31251337 PPARG JASPAR yes 27878034
chr1 31251317 31251337 PPARG JASPAR yes 118265583
chr1 31251328 31251342 TLX1 JASPAR yes 27878035
chr1 31251328 31251342 TLX1 JASPAR yes 118265584
chr1 31251362 31251367 GATA2 JASPAR yes 27878036
chr1 31251362 31251367 GATA2 JASPAR yes 118265585
chr1 31251371 31251377 MZF1 JASPAR yes 27878037
chr1 31251371 31251377 MZF1 JASPAR yes 118265586
chr1 31251380 31251395 RUNX2 JASPAR yes 27878038
chr1 31251380 31251395 RUNX2 JASPAR yes 118265587
chr1 31251390 31251394 LFA1 TRANSFAC yes 27878039
chr1 31251390 31251394 LFA1 TRANSFAC yes 118265588
chr1 31251401 31251404 MYB TRANSFAC yes 27878040
chr1 31251401 31251404 MYB TRANSFAC yes 118265589
chr1 31251421 31251432 FOSL2 JASPAR yes 27878041
chr1 31251421 31251432 FOSL2 JASPAR yes 118265590
chr1 31251422 31251433 NFE2 JASPAR yes 27878042
chr1 31251422 31251433 NFE2 JASPAR yes 118265591
chr1 31251444 31251460 NFYA JASPAR yes 27878043
chr1 31251444 31251460 NFYA JASPAR yes 118265592
chr1 31251447 31251462 NFYB JASPAR yes 27878044
chr1 31251447 31251462 NFYB JASPAR yes 118265593
chr1 31251449 31251454 NFY TRANSFAC yes 27878045
chr1 31251449 31251454 NFY TRANSFAC yes 118265594
chr1 31251464 31251472 GATA3 JASPAR yes 27878046
chr1 31251464 31251472 GATA3 JASPAR yes 118265595
chr1 31251469 31251484 NFYB JASPAR yes 27878047
chr1 31251469 31251484 NFYB JASPAR yes 118265596
chr1 31251471 31251487 NFYA JASPAR yes 27878048
chr1 31251471 31251487 NFYA JASPAR yes 118265597
chr1 31251472 31251490 NFYA JASPAR yes 27878049
chr1 31251472 31251490 NFYA JASPAR yes 118265598
chr1 31251476 31251480 H1TF2 TRANSFAC yes 27878050
chr1 31251476 31251480 NFE TRANSFAC yes 27878051
chr1 31251476 31251480 SRF TRANSFAC yes 27878052
chr1 31251476 31251480 H1TF2 TRANSFAC yes 118265599
chr1 31251476 31251480 NFE TRANSFAC yes 118265600
chr1 31251476 31251480 SRF TRANSFAC yes 118265601
chr1 31251495 31251511 POU4F2 JASPAR yes 27878053
chr1 31251495 31251511 POU4F2 JASPAR yes 118265602
chr1 31251500 31251512 HNF1B JASPAR yes 27878054
chr1 31251500 31251512 HNF1B JASPAR yes 118265603
chr1 31251504 31251508 YY1 TRANSFAC yes 27878055
chr1 31251504 31251508 YY1 TRANSFAC yes 118265604
chr1 31251520 31251538 IRF2 JASPAR yes 27878056
chr1 31251520 31251538 IRF2 JASPAR yes 118265605
chr1 31251523 31251538 PRDM1 JASPAR yes 27878057
chr1 31251523 31251538 PRDM1 JASPAR yes 118265606
SNP sites on vista1051[chr1:31251287-31251533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31251307 rs563442513 C T
PAX6 POLR2A
206127
chr1 31251308 rs142237557 G A
PAX6 POLR2A
206128
chr1 31251378 rs549254410 C A
POLR2A
206129
chr1 31251393 rs146207499 G A
LFA1 POLR2A RUNX2
206130
Genes possibly regulated by vista1051[chr1:31251287-31251533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 45147
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 79380
Expression level of Genes
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miRNAs possibly regulated by vista1051[chr1:31251287-31251533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results