EnhancerDB
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  3. vista1054[chr1:31289069-31289401]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1054[chr1:31289069-31289401]
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Tissue distribution of vista1054
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Transcription factor that possibly regulate vista1054[chr1:31289069-31289401]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31289049 31289070 MAFG JASPAR yes 27882866
chr1 31289049 31289070 MAFG JASPAR yes 118265696
chr1 31289068 31289080 GLI2 JASPAR yes 27882867
chr1 31289068 31289080 GLI2 JASPAR yes 118265697
chr1 31289078 31289082 LFA1 TRANSFAC yes 27882868
chr1 31289078 31289082 LFA1 TRANSFAC yes 118265698
chr1 31289117 31289132 ZIC3 JASPAR yes 27882869
chr1 31289117 31289132 ZIC4 JASPAR yes 27882870
chr1 31289117 31289132 ZIC3 JASPAR yes 118265699
chr1 31289117 31289132 ZIC4 JASPAR yes 118265700
chr1 31289118 31289132 ZIC1 JASPAR yes 27882871
chr1 31289118 31289132 ZIC1 JASPAR yes 118265701
chr1 31289120 31289132 NHLH1 JASPAR yes 27882872
chr1 31289120 31289132 NHLH1 JASPAR yes 118265702
chr1 31289121 31289130 SNAI2 JASPAR yes 27882873
chr1 31289121 31289130 SNAI2 JASPAR yes 118265703
chr1 31289121 31289131 TCF3 JASPAR yes 27882874
chr1 31289121 31289131 TCF4 JASPAR yes 27882875
chr1 31289121 31289131 TCF3 JASPAR yes 118265704
chr1 31289121 31289131 TCF4 JASPAR yes 118265705
chr1 31289123 31289132 ZEB1 JASPAR yes 27882876
chr1 31289123 31289132 ZEB1 JASPAR yes 118265706
chr1 31289125 31289130 SP1 TRANSFAC yes 27882877
chr1 31289125 31289130 SP1 TRANSFAC yes 118265707
chr1 31289126 31289136 SP1 JASPAR yes 27882878
chr1 31289126 31289136 SP1 JASPAR yes 118265708
chr1 31289135 31289139 H4TF2 TRANSFAC yes 27882879
chr1 31289135 31289139 H4TF2 TRANSFAC yes 118265709
chr1 31289150 31289157 NFATC2 JASPAR yes 27882880
chr1 31289150 31289157 NFATC2 JASPAR yes 118265710
chr1 31289164 31289183 RFX2 JASPAR yes 27882881
chr1 31289164 31289183 RFX2 JASPAR yes 118265711
chr1 31289168 31289178 NFATC3 JASPAR yes 27882882
chr1 31289168 31289178 NFATC3 JASPAR yes 118265712
chr1 31289168 31289184 RFX2 JASPAR yes 27882883
chr1 31289168 31289184 RFX3 JASPAR yes 27882884
chr1 31289168 31289184 RFX4 JASPAR yes 27882885
chr1 31289168 31289184 RFX5 JASPAR yes 27882886
chr1 31289168 31289184 RFX2 JASPAR yes 118265713
chr1 31289168 31289184 RFX3 JASPAR yes 118265714
chr1 31289168 31289184 RFX4 JASPAR yes 118265715
chr1 31289168 31289184 RFX5 JASPAR yes 118265716
chr1 31289179 31289198 RFX2 JASPAR yes 27882887
chr1 31289179 31289198 RFX2 JASPAR yes 118265717
chr1 31289183 31289199 RFX2 JASPAR yes 27882888
chr1 31289183 31289199 RFX3 JASPAR yes 27882889
chr1 31289183 31289199 RFX4 JASPAR yes 27882890
chr1 31289183 31289199 RFX5 JASPAR yes 27882891
chr1 31289183 31289199 RFX2 JASPAR yes 118265718
chr1 31289183 31289199 RFX3 JASPAR yes 118265719
chr1 31289183 31289199 RFX4 JASPAR yes 118265720
chr1 31289183 31289199 RFX5 JASPAR yes 118265721
chr1 31289184 31289203 RFX2 JASPAR yes 27882892
chr1 31289184 31289203 RFX2 JASPAR yes 118265722
chr1 31289186 31289201 RFX5 JASPAR yes 27882893
chr1 31289186 31289201 RFX5 JASPAR yes 118265723
chr1 31289192 31289202 HMBOX1 JASPAR yes 27882894
chr1 31289192 31289202 HMBOX1 JASPAR yes 118265724
chr1 31289194 31289197 MYB TRANSFAC yes 27882895
chr1 31289194 31289197 MYB TRANSFAC yes 118265725
chr1 31289196 31289206 SP1 JASPAR yes 27882896
chr1 31289196 31289206 SP1 JASPAR yes 118265726
chr1 31289200 31289213 TFAP2A JASPAR yes 27882897
chr1 31289200 31289213 TFAP2B JASPAR yes 27882898
chr1 31289200 31289213 TFAP2C JASPAR yes 27882899
chr1 31289200 31289213 TFAP2A JASPAR yes 118265727
chr1 31289200 31289213 TFAP2B JASPAR yes 118265728
chr1 31289200 31289213 TFAP2C JASPAR yes 118265729
chr1 31289256 31289261 GATA2 JASPAR yes 27882900
chr1 31289256 31289261 GATA2 JASPAR yes 118265730
chr1 31289258 31289269 EBF1 JASPAR yes 27882901
chr1 31289258 31289269 EBF1 JASPAR yes 118265731
chr1 31289273 31289294 ZNF263 JASPAR yes 27882902
chr1 31289273 31289294 ZNF263 JASPAR yes 118265732
chr1 31289276 31289291 NR2C2 JASPAR yes 27882903
chr1 31289276 31289291 NR2C2 JASPAR yes 118265733
chr1 31289277 31289284 SP1 TRANSFAC yes 27882904
chr1 31289277 31289284 SP1 TRANSFAC yes 118265734
chr1 31289277 31289287 SP1 JASPAR yes 27882905
chr1 31289277 31289287 SP1 JASPAR yes 118265735
chr1 31289277 31289298 ZNF263 JASPAR yes 27882906
chr1 31289277 31289298 ZNF263 JASPAR yes 118265736
chr1 31289279 31289284 SP1 TRANSFAC yes 27882907
chr1 31289279 31289284 SP1 TRANSFAC yes 118265737
chr1 31289286 31289291 ETS2 TRANSFAC yes 27882908
chr1 31289286 31289291 ETS2 TRANSFAC yes 118265738
chr1 31289292 31289297 TFAP2A TRANSFAC yes 27882909
chr1 31289292 31289297 TFAP2A TRANSFAC yes 118265739
chr1 31289292 31289298 MZF1 JASPAR yes 27882910
chr1 31289292 31289298 MZF1 JASPAR yes 118265740
chr1 31289319 31289329 GCM2 JASPAR yes 27882911
chr1 31289319 31289329 GCM2 JASPAR yes 118265741
chr1 31289320 31289330 ZNF740 JASPAR yes 27882912
chr1 31289320 31289330 ZNF740 JASPAR yes 118265742
chr1 31289322 31289332 SP1 JASPAR yes 27882913
chr1 31289322 31289332 SP1 JASPAR yes 118265743
chr1 31289322 31289343 ZNF263 JASPAR yes 27882914
chr1 31289322 31289343 ZNF263 JASPAR yes 118265744
chr1 31289325 31289330 SP1 TRANSFAC yes 27882915
chr1 31289325 31289330 SP1 TRANSFAC yes 118265745
chr1 31289329 31289350 ZNF263 JASPAR yes 27882916
chr1 31289329 31289350 ZNF263 JASPAR yes 118265746
chr1 31289330 31289334 LFA1 TRANSFAC yes 27882917
chr1 31289330 31289334 LFA1 TRANSFAC yes 118265747
chr1 31289340 31289352 HINFP JASPAR yes 27882918
chr1 31289340 31289352 HINFP JASPAR yes 118265748
chr1 31289349 31289353 NFE TRANSFAC yes 27882919
chr1 31289349 31289353 NFE TRANSFAC yes 118265749
chr1 31289351 31289361 GABPA JASPAR yes 27882920
chr1 31289351 31289361 GABPA JASPAR yes 118265750
chr1 31289351 31289364 ELF1 JASPAR yes 27882921
chr1 31289351 31289364 ELF1 JASPAR yes 118265751
chr1 31289359 31289373 RORA JASPAR yes 27882922
chr1 31289359 31289373 RORA JASPAR yes 118265752
chr1 31289364 31289379 MAFK JASPAR yes 27882923
chr1 31289364 31289379 MAFK JASPAR yes 118265753
chr1 31289365 31289371 ESR1 TRANSFAC yes 27882924
chr1 31289365 31289371 ESR1 TRANSFAC yes 118265754
chr1 31289367 31289371 ESR1 TRANSFAC yes 27882925
chr1 31289367 31289371 ESR1 TRANSFAC yes 118265755
chr1 31289374 31289378 TEAD2 TRANSFAC yes 27882926
chr1 31289374 31289378 TEAD2 TRANSFAC yes 118265756
chr1 31289374 31289379 TBP TRANSFAC yes 27882927
chr1 31289374 31289379 TBP TRANSFAC yes 118265757
chr1 31289399 31289403 YY1 TRANSFAC yes 27882928
chr1 31289399 31289403 YY1 TRANSFAC yes 118265758
chr1 31289399 31289412 EOMES JASPAR yes 27882929
chr1 31289399 31289412 EOMES JASPAR yes 118265759
chr1 31289401 31289411 TBR1 JASPAR yes 27882930
chr1 31289401 31289411 TBR1 JASPAR yes 118265760
chr1 31289401 31289412 TBX2 JASPAR yes 27882931
chr1 31289401 31289412 TBX2 JASPAR yes 118265761
SNP sites on vista1054[chr1:31289069-31289401]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31289078 rs61743640 C T
GLI2 LFA1
206633
chr1 31289112 rs567576322 G A,C no 206634
chr1 31289188 rs149188861 G A
RFX2 RFX3 RFX4 RFX5
206635
chr1 31289265 rs1407887 G T
EBF1
206636
chr1 31289285 rs116648865 G A
NR2C2 SP1 ZNF263
206637
Genes possibly regulated by vista1054[chr1:31289069-31289401]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31184124 31196434 - MATN1 ENSG00000162510.5 31196434 0.86 1.0 425 7365
chr1 31205316 31230667 - LAPTM5 ENSG00000162511.7 31230667 0.9 0.86 426 41598
chr1 31342314 31381608 - SDC3 ENSG00000162512.11 31381608 0.79 1.0 427 7793
Expression level of Genes
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miRNAs possibly regulated by vista1054[chr1:31289069-31289401]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results