EnhancerDB
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  3. vista1058[chr1:31401933-31402089]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1058[chr1:31401933-31402089]
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Tissue distribution of vista1058
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Transcription factor that possibly regulate vista1058[chr1:31401933-31402089]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31401941 31401948 PEA3 TRANSFAC yes 27892021
chr1 31401941 31401948 PEA3 TRANSFAC yes 118265912
chr1 31401948 31401960 INSM1 JASPAR yes 27892022
chr1 31401948 31401960 INSM1 JASPAR yes 118265913
chr1 31401975 31401979 YY1 TRANSFAC yes 27892023
chr1 31401975 31401979 YY1 TRANSFAC yes 118265914
chr1 31401978 31401981 MYB TRANSFAC yes 27892024
chr1 31401978 31401981 MYB TRANSFAC yes 118265915
chr1 31401985 31401997 INSM1 JASPAR yes 27892025
chr1 31401985 31401997 INSM1 JASPAR yes 118265916
chr1 31402009 31402019 GABPA JASPAR yes 27892026
chr1 31402009 31402019 GABPA JASPAR yes 118265917
chr1 31402044 31402052 MEIS3 JASPAR yes 27892027
chr1 31402044 31402052 MEIS3 JASPAR yes 118265918
chr1 31402065 31402075 FIGLA JASPAR yes 27892028
chr1 31402065 31402075 FIGLA JASPAR yes 118265919
chr1 31402072 31402078 YY1 JASPAR yes 27892029
chr1 31402072 31402078 YY1 JASPAR yes 118265920
SNP sites on vista1058[chr1:31401933-31402089]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31402040 rs368185399 TGA T no 207769
chr1 31402040 rs549410197 TGA T no 207770
Genes possibly regulated by vista1058[chr1:31401933-31402089]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31342314 31381608 - SDC3 ENSG00000162512.11 31381608 0.79 1.0 427 79675
Expression level of Genes
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miRNAs possibly regulated by vista1058[chr1:31401933-31402089]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results