EnhancerDB
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  3. vista1065[chr1:31625313-31625543]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1065[chr1:31625313-31625543]
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Tissue distribution of vista1065
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Transcription factor that possibly regulate vista1065[chr1:31625313-31625543]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31625309 31625323 TCF7L2 JASPAR yes 27912841
chr1 31625309 31625323 TCF7L2 JASPAR yes 118266185
chr1 31625311 31625324 ATF4 JASPAR yes 27912842
chr1 31625311 31625324 ATF4 JASPAR yes 118266186
chr1 31625361 31625381 TP63 JASPAR yes 27912843
chr1 31625361 31625381 TP63 JASPAR yes 118266187
chr1 31625362 31625380 TP53 JASPAR yes 27912844
chr1 31625362 31625380 TP53 JASPAR yes 118266188
chr1 31625374 31625392 NFYA JASPAR yes 27912845
chr1 31625374 31625392 NFYA JASPAR yes 118266189
chr1 31625377 31625393 NFYA JASPAR yes 27912846
chr1 31625377 31625393 NFYA JASPAR yes 118266190
chr1 31625380 31625395 NFYB JASPAR yes 27912847
chr1 31625380 31625395 NFYB JASPAR yes 118266191
chr1 31625397 31625402 SP1 TRANSFAC yes 27912848
chr1 31625397 31625402 SP1 TRANSFAC yes 118266192
chr1 31625397 31625406 HIC2 JASPAR yes 27912849
chr1 31625397 31625406 HIC2 JASPAR yes 118266193
chr1 31625400 31625404 LFA1 TRANSFAC yes 27912850
chr1 31625400 31625404 LFA1 TRANSFAC yes 118266194
chr1 31625408 31625423 NFYB JASPAR yes 27912851
chr1 31625408 31625423 NFYB JASPAR yes 118266195
chr1 31625410 31625423 DUXA JASPAR yes 27912852
chr1 31625410 31625423 DUXA JASPAR yes 118266196
chr1 31625410 31625426 NFYA JASPAR yes 27912853
chr1 31625410 31625426 NFYA JASPAR yes 118266197
chr1 31625411 31625422 DUX4 JASPAR yes 27912854
chr1 31625411 31625422 DUX4 JASPAR yes 118266198
chr1 31625411 31625429 NFYA JASPAR yes 27912855
chr1 31625411 31625429 NFYA JASPAR yes 118266199
chr1 31625415 31625419 H1TF2 TRANSFAC yes 27912856
chr1 31625415 31625419 NFE TRANSFAC yes 27912857
chr1 31625415 31625419 SRF TRANSFAC yes 27912858
chr1 31625415 31625419 H1TF2 TRANSFAC yes 118266200
chr1 31625415 31625419 NFE TRANSFAC yes 118266201
chr1 31625415 31625419 SRF TRANSFAC yes 118266202
chr1 31625419 31625431 PKNOX1 JASPAR yes 27912859
chr1 31625419 31625431 PKNOX2 JASPAR yes 27912860
chr1 31625419 31625431 TGIF1 JASPAR yes 27912861
chr1 31625419 31625431 TGIF2 JASPAR yes 27912862
chr1 31625419 31625431 PKNOX1 JASPAR yes 118266203
chr1 31625419 31625431 PKNOX2 JASPAR yes 118266204
chr1 31625419 31625431 TGIF1 JASPAR yes 118266205
chr1 31625419 31625431 TGIF2 JASPAR yes 118266206
chr1 31625419 31625438 RFX2 JASPAR yes 27912863
chr1 31625419 31625438 RFX2 JASPAR yes 118266207
chr1 31625422 31625427 MYC TRANSFAC yes 27912864
chr1 31625422 31625427 MYC TRANSFAC yes 118266208
chr1 31625457 31625468 BATF JASPAR yes 27912865
chr1 31625457 31625468 BATF JASPAR yes 118266209
chr1 31625458 31625469 FOSL2 JASPAR yes 27912866
chr1 31625458 31625469 FOSL2 JASPAR yes 118266210
chr1 31625459 31625470 FOSL1 JASPAR yes 27912867
chr1 31625459 31625470 FOSL1 JASPAR yes 118266211
chr1 31625460 31625471 JUNB JASPAR yes 27912868
chr1 31625460 31625471 JUNB JASPAR yes 118266212
chr1 31625460 31625474 JUN JASPAR yes 27912869
chr1 31625460 31625474 JUN JASPAR yes 118266213
chr1 31625463 31625474 USF1 JASPAR yes 27912870
chr1 31625463 31625474 USF2 JASPAR yes 27912871
chr1 31625463 31625474 USF1 JASPAR yes 118266214
chr1 31625463 31625474 USF2 JASPAR yes 118266215
chr1 31625464 31625474 TFEB JASPAR yes 27912872
chr1 31625464 31625474 TFEC JASPAR yes 27912873
chr1 31625464 31625474 TFEB JASPAR yes 118266216
chr1 31625464 31625474 TFEC JASPAR yes 118266217
chr1 31625470 31625485 TFAP2A JASPAR yes 27912874
chr1 31625470 31625485 TFAP2C JASPAR yes 27912875
chr1 31625470 31625485 TFAP2A JASPAR yes 118266218
chr1 31625470 31625485 TFAP2C JASPAR yes 118266219
chr1 31625487 31625495 TBX5 JASPAR yes 27912876
chr1 31625487 31625495 TBX5 JASPAR yes 118266220
chr1 31625490 31625501 FOXH1 JASPAR yes 27912877
chr1 31625490 31625501 FOXH1 JASPAR yes 118266221
chr1 31625490 31625511 ZNF263 JASPAR yes 27912878
chr1 31625490 31625511 ZNF263 JASPAR yes 118266222
chr1 31625498 31625516 RARA JASPAR yes 27912879
chr1 31625498 31625516 RARA JASPAR yes 118266223
chr1 31625514 31625525 STAT1 JASPAR yes 27912880
chr1 31625514 31625525 STAT1 JASPAR yes 118266224
SNP sites on vista1065[chr1:31625313-31625543]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31625325 rs12095317 C T no 209823
chr1 31625330 rs139650391 G T no 209824
chr1 31625331 rs143365182 C T no 209825
chr1 31625342 rs55956747 G A no 209826
chr1 31625389 rs12095326 C T
NFYA NFYB
209827
Genes possibly regulated by vista1065[chr1:31625313-31625543]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31404353 31538838 - PUM1 ENSG00000134644.11 31538838 0.67 1.0 428 13525
chr1 31652592 31712401 - NKAIN1 ENSG00000084628.5 31712401 0.95 1.0 429 13142
Expression level of Genes
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miRNAs possibly regulated by vista1065[chr1:31625313-31625543]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results