EnhancerDB
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  3. vista1076[chr1:31947490-31947850]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1076[chr1:31947490-31947850]
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Tissue distribution of vista1076
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Transcription factor that possibly regulate vista1076[chr1:31947490-31947850]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31947490 31947505 FOXP1 JASPAR yes 118266630
chr1 31947490 31947511 IRF1 JASPAR yes 118266631
chr1 31947491 31947506 FOXP1 JASPAR yes 118266632
chr1 31947491 31947512 IRF1 JASPAR yes 118266633
chr1 31947492 31947507 FOXP1 JASPAR yes 118266634
chr1 31947492 31947513 IRF1 JASPAR yes 118266635
chr1 31947493 31947508 FOXP1 JASPAR yes 118266636
chr1 31947493 31947514 IRF1 JASPAR yes 118266637
chr1 31947494 31947509 FOXP1 JASPAR yes 118266638
chr1 31947495 31947510 FOXP1 JASPAR yes 118266639
chr1 31947510 31947518 TBX5 JASPAR yes 118266640
chr1 31947510 31947519 ZEB1 JASPAR yes 118266641
chr1 31947513 31947518 USF2 TRANSFAC yes 118266642
chr1 31947538 31947548 HOXA13 JASPAR yes 118266643
chr1 31947538 31947548 HOXB13 JASPAR yes 118266644
chr1 31947538 31947548 HOXD13 JASPAR yes 118266645
chr1 31947539 31947549 ALX3 JASPAR yes 118266646
chr1 31947539 31947549 ESX1 JASPAR yes 118266647
chr1 31947539 31947549 GSX1 JASPAR yes 118266648
chr1 31947539 31947549 GSX2 JASPAR yes 118266649
chr1 31947539 31947549 LBX2 JASPAR yes 118266650
chr1 31947539 31947549 MIXL1 JASPAR yes 118266651
chr1 31947539 31947549 MNX1 JASPAR yes 118266652
chr1 31947539 31947549 RAX JASPAR yes 118266653
chr1 31947540 31947548 BARX1 JASPAR yes 118266654
chr1 31947540 31947548 BSX JASPAR yes 118266655
chr1 31947540 31947548 DLX6 JASPAR yes 118266656
chr1 31947540 31947548 ISX JASPAR yes 118266657
chr1 31947540 31947548 LBX1 JASPAR yes 118266658
chr1 31947540 31947548 LHX9 JASPAR yes 118266659
chr1 31947540 31947548 MSX1 JASPAR yes 118266660
chr1 31947540 31947548 MSX2 JASPAR yes 118266661
chr1 31947540 31947548 NKX6-2 JASPAR yes 118266662
chr1 31947540 31947548 PRRX1 JASPAR yes 118266663
chr1 31947540 31947548 RAX2 JASPAR yes 118266664
chr1 31947540 31947548 SHOX JASPAR yes 118266665
chr1 31947540 31947548 UNCX JASPAR yes 118266666
chr1 31947569 31947574 TFAP2A TRANSFAC yes 118266667
chr1 31947569 31947575 MZF1 JASPAR yes 118266668
chr1 31947573 31947587 PLAG1 JASPAR yes 118266669
chr1 31947581 31947596 PRDM1 JASPAR yes 118266670
chr1 31947616 31947637 ZNF263 JASPAR yes 118266671
chr1 31947621 31947635 SPI1 JASPAR yes 118266672
chr1 31947621 31947635 SPIC JASPAR yes 118266673
chr1 31947622 31947635 ELF1 JASPAR yes 118266674
chr1 31947655 31947666 DUX4 JASPAR yes 27931058
chr1 31947655 31947666 DUX4 JASPAR yes 118266675
chr1 31947673 31947680 JUN TRANSFAC yes 27931059
chr1 31947673 31947680 SP1 TRANSFAC yes 27931060
chr1 31947673 31947680 JUN TRANSFAC yes 118266676
chr1 31947673 31947680 SP1 TRANSFAC yes 118266677
chr1 31947686 31947690 NFE TRANSFAC yes 27931061
chr1 31947686 31947690 NFE TRANSFAC yes 118266678
chr1 31947702 31947720 NR3C1 JASPAR yes 27931062
chr1 31947702 31947720 NR3C1 JASPAR yes 118266679
chr1 31947721 31947734 DUXA JASPAR yes 27931063
chr1 31947721 31947734 DUXA JASPAR yes 118266680
chr1 31947722 31947733 DUX4 JASPAR yes 27931064
chr1 31947722 31947733 PHOX2A JASPAR yes 27931065
chr1 31947722 31947733 PROP1 JASPAR yes 27931066
chr1 31947722 31947733 DUX4 JASPAR yes 118266681
chr1 31947722 31947733 PHOX2A JASPAR yes 118266682
chr1 31947722 31947733 PROP1 JASPAR yes 118266683
chr1 31947728 31947740 HLF JASPAR yes 27931067
chr1 31947728 31947740 HLF JASPAR yes 118266684
chr1 31947735 31947738 MYB TRANSFAC yes 27931068
chr1 31947735 31947738 MYB TRANSFAC yes 118266685
chr1 31947743 31947747 H4TF2 TRANSFAC yes 27931069
chr1 31947743 31947747 H4TF2 TRANSFAC yes 118266686
chr1 31947752 31947767 ZBTB33 JASPAR yes 27931070
chr1 31947752 31947767 ZBTB33 JASPAR yes 118266687
chr1 31947754 31947764 MAX JASPAR yes 27931071
chr1 31947754 31947764 MAX JASPAR yes 118266688
chr1 31947755 31947765 BHLHE40 JASPAR yes 27931072
chr1 31947755 31947765 BHLHE41 JASPAR yes 27931073
chr1 31947755 31947765 MAX JASPAR yes 27931074
chr1 31947755 31947765 MLXIPL JASPAR yes 27931075
chr1 31947755 31947765 SREBF2 JASPAR yes 27931076
chr1 31947755 31947765 TFE3 JASPAR yes 27931077
chr1 31947755 31947765 TFEC JASPAR yes 27931078
chr1 31947755 31947765 BHLHE40 JASPAR yes 118266689
chr1 31947755 31947765 BHLHE41 JASPAR yes 118266690
chr1 31947755 31947765 MAX JASPAR yes 118266691
chr1 31947755 31947765 MLXIPL JASPAR yes 118266692
chr1 31947755 31947765 SREBF2 JASPAR yes 118266693
chr1 31947755 31947765 TFE3 JASPAR yes 118266694
chr1 31947755 31947765 TFEC JASPAR yes 118266695
chr1 31947757 31947762 MYC TRANSFAC yes 27931079
chr1 31947757 31947762 USF1 TRANSFAC yes 27931080
chr1 31947757 31947762 USF2 TRANSFAC yes 27931081
chr1 31947757 31947762 MYC TRANSFAC yes 118266696
chr1 31947757 31947762 USF1 TRANSFAC yes 118266697
chr1 31947757 31947762 USF2 TRANSFAC yes 118266698
chr1 31947772 31947786 GATA2 JASPAR yes 27931082
chr1 31947772 31947786 GATA2 JASPAR yes 118266699
chr1 31947774 31947782 GATA3 JASPAR yes 27931083
chr1 31947774 31947782 GATA3 JASPAR yes 118266700
chr1 31947796 31947806 SP1 JASPAR yes 27931084
chr1 31947796 31947806 SP1 JASPAR yes 118266701
chr1 31947798 31947803 SP1 TRANSFAC yes 27931085
chr1 31947798 31947803 SP1 TRANSFAC yes 118266702
chr1 31947803 31947807 ESR1 TRANSFAC yes 27931086
chr1 31947803 31947807 ESR1 TRANSFAC yes 118266703
chr1 31947829 31947835 TCF4 TRANSFAC yes 27931087
chr1 31947829 31947835 TCF4 TRANSFAC yes 118266704
chr1 31947837 31947842 GATA2 JASPAR yes 27931088
chr1 31947837 31947842 GATA2 JASPAR yes 118266705
SNP sites on vista1076[chr1:31947490-31947850]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31947492 rs141158732 A AG
FOXP1 IRF1
212268
chr1 31947524 rs573575637 C T no 212269
chr1 31947577 rs189036142 G A,T
PLAG1
212270
chr1 31947649 rs116719935 C T no 212271
chr1 31947685 rs10914405 C T no 212272
chr1 31947686 rs10914406 A G
NFE
212273
chr1 31947743 rs373517456 G A
H4TF2
212274
chr1 31947828 rs184933028 G A no 212275
Genes possibly regulated by vista1076[chr1:31947490-31947850]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31838472 31849697 - FABP3 ENSG00000121769.3 31849697 0.99 0.99 432 2207
chr1 31882412 31907525 + SERINC2 ENSG00000168528.7 31882412 0.95 1.0 433 34922
chr1 31902192 31902614 - AC114494.1 ENSG00000268950.1 31902614 0.95 1.0 434 55124
chr1 32042116 32053288 + TINAGL1 ENSG00000142910.11 32042116 0.79 1.0 435 5734
Expression level of Genes
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miRNAs possibly regulated by vista1076[chr1:31947490-31947850]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results