EnhancerDB
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  3. vista1080[chr1:32001284-32001534]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1080[chr1:32001284-32001534]
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Tissue distribution of vista1080
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Transcription factor that possibly regulate vista1080[chr1:32001284-32001534]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 32001213 32001468 STAT3 UCSC Txn Factor no Conserved 107802735
chr1 32001276 32001287 EBF1 JASPAR yes 27938134
chr1 32001276 32001287 EBF1 JASPAR yes 118266873
chr1 32001323 32001334 FOSL2 JASPAR yes 27938135
chr1 32001323 32001334 JUNB JASPAR yes 27938136
chr1 32001323 32001334 FOSL2 JASPAR yes 118266874
chr1 32001323 32001334 JUNB JASPAR yes 118266875
chr1 32001324 32001335 FOSL1 JASPAR yes 27938137
chr1 32001324 32001335 JUND JASPAR yes 27938138
chr1 32001324 32001335 FOSL1 JASPAR yes 118266876
chr1 32001324 32001335 JUND JASPAR yes 118266877
chr1 32001325 32001332 JUN TRANSFAC yes 27938139
chr1 32001325 32001332 JUN TRANSFAC yes 118266878
chr1 32001330 32001333 MYB TRANSFAC yes 27938140
chr1 32001330 32001333 MYB TRANSFAC yes 118266879
chr1 32001341 32001356 HSF1 JASPAR yes 27938141
chr1 32001341 32001356 HSF1 JASPAR yes 118266880
chr1 32001351 32001358 SPIB JASPAR yes 27938142
chr1 32001351 32001358 SPIB JASPAR yes 118266881
chr1 32001361 32001377 SOX4 JASPAR yes 27938143
chr1 32001361 32001377 SOX4 JASPAR yes 118266882
chr1 32001362 32001377 SOX21 JASPAR yes 27938144
chr1 32001362 32001377 SOX21 JASPAR yes 118266883
chr1 32001377 32001389 CREB1 JASPAR yes 27938145
chr1 32001377 32001389 CREB1 JASPAR yes 118266884
chr1 32001384 32001389 SP1 TRANSFAC yes 27938146
chr1 32001384 32001389 SP1 TRANSFAC yes 118266885
chr1 32001416 32001437 ZNF263 JASPAR yes 27938147
chr1 32001416 32001437 ZNF263 JASPAR yes 118266886
chr1 32001441 32001452 FOSL1 JASPAR yes 27938148
chr1 32001441 32001452 FOSL1 JASPAR yes 118266887
chr1 32001442 32001453 FOSL2 JASPAR yes 27938149
chr1 32001442 32001453 JUNB JASPAR yes 27938150
chr1 32001442 32001453 FOSL2 JASPAR yes 118266888
chr1 32001442 32001453 JUNB JASPAR yes 118266889
chr1 32001488 32001492 NFE TRANSFAC yes 27938151
chr1 32001488 32001492 NFE TRANSFAC yes 118266890
chr1 32001488 32001493 GATA1 TRANSFAC yes 27938152
chr1 32001488 32001493 GATA1 TRANSFAC yes 118266891
chr1 32001488 32001494 GATA3 JASPAR yes 27938153
chr1 32001488 32001494 GATA3 JASPAR yes 118266892
chr1 32001492 32001502 EN2 JASPAR yes 27938154
chr1 32001492 32001502 EN2 JASPAR yes 118266893
chr1 32001496 32001514 SRF JASPAR yes 27938155
chr1 32001496 32001514 SRF JASPAR yes 118266894
chr1 32001499 32001511 SRF JASPAR yes 27938156
chr1 32001499 32001511 SRF JASPAR yes 118266895
chr1 32001511 32001525 RXRB JASPAR yes 27938157
chr1 32001511 32001525 RXRG JASPAR yes 27938158
chr1 32001511 32001525 RXRB JASPAR yes 118266896
chr1 32001511 32001525 RXRG JASPAR yes 118266897
SNP sites on vista1080[chr1:32001284-32001534]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 32001293 rs74063775 C T
STAT3
212973
chr1 32001405 rs74063776 G A
STAT3
212974
chr1 32001500 rs6425763 A G
EN2 SRF
212975
chr1 32001505 rs59341174 A C
SRF
212976
chr1 32001533 rs370960845 C CA no 212977
Genes possibly regulated by vista1080[chr1:32001284-32001534]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31902192 31902614 - AC114494.1 ENSG00000268950.1 31902614 0.95 1.0 434 1330
chr1 32042116 32053288 + TINAGL1 ENSG00000142910.11 32042116 0.79 1.0 435 59418
chr1 32083287 32098119 + HCRTR1 ENSG00000121764.7 32083287 0.94 1.0 436 18247
Expression level of Genes
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miRNAs possibly regulated by vista1080[chr1:32001284-32001534]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results