EnhancerDB
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  3. vista1086[chr1:32180603-32180986]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1086[chr1:32180603-32180986]
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Tissue distribution of vista1086
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Transcription factor that possibly regulate vista1086[chr1:32180603-32180986]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 32180607 32180621 PLAG1 JASPAR yes 27948141
chr1 32180607 32180621 PLAG1 JASPAR yes 118267147
chr1 32180609 32180619 SP1 JASPAR yes 27948142
chr1 32180609 32180619 SP1 JASPAR yes 118267148
chr1 32180614 32180620 MZF1 JASPAR yes 27948143
chr1 32180614 32180620 MZF1 JASPAR yes 118267149
chr1 32180662 32180665 MYB TRANSFAC yes 27948144
chr1 32180662 32180665 MYB TRANSFAC yes 118267150
chr1 32180673 32180683 NKX2-3 JASPAR yes 27948145
chr1 32180673 32180683 NKX2-3 JASPAR yes 118267151
chr1 32180674 32180682 ISL2 JASPAR yes 27948146
chr1 32180674 32180682 ISL2 JASPAR yes 118267152
chr1 32180674 32180683 NKX3-2 JASPAR yes 27948147
chr1 32180674 32180683 NKX3-2 JASPAR yes 118267153
chr1 32180708 32180726 NFYA JASPAR yes 27948148
chr1 32180708 32180726 NFYA JASPAR yes 118267154
chr1 32180711 32180727 NFYA JASPAR yes 27948149
chr1 32180711 32180727 NFYA JASPAR yes 118267155
chr1 32180714 32180729 NFYB JASPAR yes 27948150
chr1 32180714 32180729 NFYB JASPAR yes 118267156
chr1 32180719 32180734 HNF4A JASPAR yes 27948151
chr1 32180719 32180734 HNF4A JASPAR yes 118267157
chr1 32180723 32180738 RFX5 JASPAR yes 27948152
chr1 32180723 32180738 RFX5 JASPAR yes 118267158
chr1 32180726 32180731 SP1 TRANSFAC yes 27948153
chr1 32180726 32180731 SP1 TRANSFAC yes 118267159
chr1 32180732 32180738 SP1 TRANSFAC yes 27948154
chr1 32180732 32180738 SP1 TRANSFAC yes 118267160
chr1 32180732 32180742 SP1 TRANSFAC yes 27948155
chr1 32180732 32180742 SP1 TRANSFAC yes 118267161
chr1 32180733 32180738 SP1 TRANSFAC yes 27948156
chr1 32180733 32180738 SP1 TRANSFAC yes 118267162
chr1 32180734 32180739 SP1 TRANSFAC yes 27948157
chr1 32180734 32180739 SP1 TRANSFAC yes 118267163
chr1 32180737 32180742 SP1 TRANSFAC yes 27948158
chr1 32180737 32180742 SP1 TRANSFAC yes 118267164
chr1 32180738 32180743 SP1 TRANSFAC yes 27948159
chr1 32180738 32180743 SP1 TRANSFAC yes 118267165
chr1 32180738 32180744 SP1 TRANSFAC yes 27948160
chr1 32180738 32180744 SP1 TRANSFAC yes 118267166
chr1 32180765 32180786 ZNF263 JASPAR yes 27948161
chr1 32180765 32180786 ZNF263 JASPAR yes 118267167
chr1 32180767 32180778 E2F6 JASPAR yes 27948162
chr1 32180767 32180778 E2F6 JASPAR yes 118267168
chr1 32180768 32180773 SP1 TRANSFAC yes 27948163
chr1 32180768 32180773 SP1 TRANSFAC yes 118267169
chr1 32180779 32180786 SPIB JASPAR yes 27948164
chr1 32180779 32180786 SPIB JASPAR yes 118267170
chr1 32180779 32180790 FLI1 JASPAR yes 27948165
chr1 32180779 32180790 FLI1 JASPAR yes 118267171
chr1 32180798 32180803 TFAP2A TRANSFAC yes 27948166
chr1 32180798 32180803 TFAP2A TRANSFAC yes 118267172
chr1 32180798 32180804 MZF1 JASPAR yes 27948167
chr1 32180798 32180804 MZF1 JASPAR yes 118267173
chr1 32180809 32180819 SP1 JASPAR yes 27948168
chr1 32180809 32180819 SP1 JASPAR yes 118267174
chr1 32180810 32180830 RREB1 JASPAR yes 27948169
chr1 32180810 32180830 RREB1 JASPAR yes 118267175
chr1 32180814 32180824 SP1 JASPAR yes 27948170
chr1 32180814 32180824 SP1 JASPAR yes 118267176
chr1 32180815 32180821 SP1 TRANSFAC yes 27948171
chr1 32180815 32180821 SP1 TRANSFAC yes 118267177
chr1 32180815 32180825 SP1 JASPAR yes 27948172
chr1 32180815 32180825 SP1 JASPAR yes 118267178
chr1 32180869 32180881 GLI2 JASPAR yes 27948173
chr1 32180869 32180881 GLI2 JASPAR yes 118267179
chr1 32180878 32180897 PAX5 JASPAR yes 27948174
chr1 32180878 32180897 PAX5 JASPAR yes 118267180
chr1 32180881 32180895 TLX1 JASPAR yes 27948175
chr1 32180881 32180895 TLX1 JASPAR yes 118267181
chr1 32180904 32180909 SP1 TRANSFAC yes 27948176
chr1 32180904 32180909 SP1 TRANSFAC yes 118267182
chr1 32180905 32180916 TFAP2A JASPAR yes 27948177
chr1 32180905 32180916 TFAP2A JASPAR yes 118267183
chr1 32180906 32180915 TFAP2A JASPAR yes 27948178
chr1 32180906 32180915 TFAP2A JASPAR yes 118267184
chr1 32180914 32180924 SP1 JASPAR yes 27948179
chr1 32180914 32180924 SP1 JASPAR yes 118267185
chr1 32180920 32180928 GATA1 TRANSFAC yes 27948180
chr1 32180920 32180928 GATA1 TRANSFAC yes 118267186
chr1 32180923 32180927 NFE TRANSFAC yes 27948181
chr1 32180923 32180927 NFE TRANSFAC yes 118267187
chr1 32180923 32180928 GATA1 TRANSFAC yes 27948182
chr1 32180923 32180928 GATA1 TRANSFAC yes 118267188
chr1 32180923 32180929 GATA3 JASPAR yes 27948183
chr1 32180923 32180929 GATA3 JASPAR yes 118267189
chr1 32180933 32180938 SP1 TRANSFAC yes 27948184
chr1 32180933 32180938 SP1 TRANSFAC yes 118267190
chr1 32180948 32180962 RXRB JASPAR yes 27948185
chr1 32180948 32180962 RXRG JASPAR yes 27948186
chr1 32180948 32180962 RXRB JASPAR yes 118267191
chr1 32180948 32180962 RXRG JASPAR yes 118267192
chr1 32180960 32180964 NFE TRANSFAC yes 27948187
chr1 32180960 32180964 NFE TRANSFAC yes 118267193
chr1 32180969 32180973 H4TF2 TRANSFAC yes 27948188
chr1 32180969 32180973 H4TF2 TRANSFAC yes 118267194
SNP sites on vista1086[chr1:32180603-32180986]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 32180728 rs144292880 G A
HNF4A NFYB RFX5 SP1
214198
chr1 32180872 rs7551834 G A
GLI2
214199
chr1 32180962 rs574122690 T C
NFE RXRB RXRG
214200
Genes possibly regulated by vista1086[chr1:32180603-32180986]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 32083287 32098119 + HCRTR1 ENSG00000121764.7 32083287 0.94 1.0 436 2684
chr1 32095463 32110497 - PEF1 ENSG00000162517.8 32110497 0.73 0.99 437 29894
chr1 32117848 32169920 - COL16A1 ENSG00000084636.13 32169920 0.88 0.99 438 89317
chr1 32192718 32230494 - BAI2 ENSG00000121753.8 32230494 0.82 1.0 439 50492
Expression level of Genes
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miRNAs possibly regulated by vista1086[chr1:32180603-32180986]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results