EnhancerDB
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  3. vista109[chr1:3297180-3297261]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista109[chr1:3297180-3297261]
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Tissue distribution of vista109
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Transcription factor that possibly regulate vista109[chr1:3297180-3297261]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3297177 3297181 NFE TRANSFAC yes 26287199
chr1 3297177 3297181 NFE TRANSFAC yes 118218413
chr1 3297178 3297198 TBX19 JASPAR yes 26287200
chr1 3297178 3297198 TBX19 JASPAR yes 118218414
chr1 3297180 3297196 T JASPAR yes 26287201
chr1 3297180 3297196 T JASPAR yes 118218415
chr1 3297183 3297193 GCM2 JASPAR yes 26287202
chr1 3297183 3297193 GCM2 JASPAR yes 118218416
chr1 3297190 3297209 PAX5 JASPAR yes 26287203
chr1 3297190 3297209 PAX5 JASPAR yes 118218417
chr1 3297193 3297210 PAX1 JASPAR yes 26287204
chr1 3297193 3297210 PAX9 JASPAR yes 26287205
chr1 3297193 3297210 PAX1 JASPAR yes 118218418
chr1 3297193 3297210 PAX9 JASPAR yes 118218419
chr1 3297206 3297226 TP63 JASPAR yes 26287206
chr1 3297206 3297226 TP63 JASPAR yes 118218420
chr1 3297207 3297225 TP73 JASPAR yes 26287207
chr1 3297207 3297225 TP73 JASPAR yes 118218421
chr1 3297216 3297233 PAX1 JASPAR yes 26287208
chr1 3297216 3297233 PAX9 JASPAR yes 26287209
chr1 3297216 3297233 PAX1 JASPAR yes 118218422
chr1 3297216 3297233 PAX9 JASPAR yes 118218423
chr1 3297236 3297251 FOXA1 JASPAR yes 26287210
chr1 3297236 3297251 FOXA1 JASPAR yes 118218424
chr1 3297238 3297252 FOXF2 JASPAR yes 26287211
chr1 3297238 3297252 FOXF2 JASPAR yes 118218425
chr1 3297239 3297247 FOXD1 JASPAR yes 26287212
chr1 3297239 3297247 FOXG1 JASPAR yes 26287213
chr1 3297239 3297247 FOXO3 JASPAR yes 26287214
chr1 3297239 3297247 FOXD1 JASPAR yes 118218426
chr1 3297239 3297247 FOXG1 JASPAR yes 118218427
chr1 3297239 3297247 FOXO3 JASPAR yes 118218428
chr1 3297239 3297250 FOXC1 JASPAR yes 26287215
chr1 3297239 3297250 FOXC1 JASPAR yes 118218429
chr1 3297240 3297247 FOXD2 JASPAR yes 26287216
chr1 3297240 3297247 FOXI1 JASPAR yes 26287217
chr1 3297240 3297247 FOXL1 JASPAR yes 26287218
chr1 3297240 3297247 FOXO4 JASPAR yes 26287219
chr1 3297240 3297247 FOXO6 JASPAR yes 26287220
chr1 3297240 3297247 FOXP3 JASPAR yes 26287221
chr1 3297240 3297247 FOXD2 JASPAR yes 118218430
chr1 3297240 3297247 FOXI1 JASPAR yes 118218431
chr1 3297240 3297247 FOXL1 JASPAR yes 118218432
chr1 3297240 3297247 FOXO4 JASPAR yes 118218433
chr1 3297240 3297247 FOXO6 JASPAR yes 118218434
chr1 3297240 3297247 FOXP3 JASPAR yes 118218435
chr1 3297240 3297248 FOXO3 JASPAR yes 26287222
chr1 3297240 3297248 FOXO3 JASPAR yes 118218436
chr1 3297240 3297251 FOXA1 JASPAR yes 26287223
chr1 3297240 3297251 FOXA1 JASPAR yes 118218437
chr1 3297255 3297261 MAZ TRANSFAC yes 26287224
chr1 3297255 3297261 MAZ TRANSFAC yes 118218438
SNP sites on vista109[chr1:3297180-3297261]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3297190 rs141728073 G A
GCM2 PAX5 T TBX19
21567
chr1 3297200 rs115752131 C T
PAX1 PAX5 PAX9
21568
Genes possibly regulated by vista109[chr1:3297180-3297261]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 26271
Expression level of Genes
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miRNAs possibly regulated by vista109[chr1:3297180-3297261]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results