EnhancerDB
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  3. vista110[chr1:3309990-3310261]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista110[chr1:3309990-3310261]
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Tissue distribution of vista110
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Transcription factor that possibly regulate vista110[chr1:3309990-3310261]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3309992 3310007 ZBTB33 JASPAR yes 26287822
chr1 3309992 3310007 ZBTB33 JASPAR yes 118218439
chr1 3310011 3310019 OTX2 JASPAR yes 26287823
chr1 3310011 3310019 OTX2 JASPAR yes 118218440
chr1 3310016 3310020 TEAD2 TRANSFAC yes 26287824
chr1 3310016 3310020 TEAD2 TRANSFAC yes 118218441
chr1 3310027 3310039 TEAD1 JASPAR yes 26287825
chr1 3310027 3310039 TEAD1 JASPAR yes 118218442
chr1 3310029 3310039 TEAD1 JASPAR yes 26287826
chr1 3310029 3310039 TEAD4 JASPAR yes 26287827
chr1 3310029 3310039 TEAD1 JASPAR yes 118218443
chr1 3310029 3310039 TEAD4 JASPAR yes 118218444
chr1 3310030 3310038 TEAD3 JASPAR yes 26287828
chr1 3310030 3310038 TEAD3 JASPAR yes 118218445
chr1 3310050 3310064 POU4F1 JASPAR yes 26287829
chr1 3310050 3310064 POU4F1 JASPAR yes 118218446
chr1 3310050 3310066 POU4F2 JASPAR yes 26287830
chr1 3310050 3310066 POU4F3 JASPAR yes 26287831
chr1 3310050 3310066 POU4F2 JASPAR yes 118218447
chr1 3310050 3310066 POU4F3 JASPAR yes 118218448
chr1 3310056 3310066 HOXC10 JASPAR yes 26287832
chr1 3310056 3310066 HOXD11 JASPAR yes 26287833
chr1 3310056 3310066 HOXC10 JASPAR yes 118218449
chr1 3310056 3310066 HOXD11 JASPAR yes 118218450
chr1 3310056 3310067 HOXC11 JASPAR yes 26287834
chr1 3310056 3310067 HOXC11 JASPAR yes 118218451
chr1 3310057 3310066 CDX1 JASPAR yes 26287835
chr1 3310057 3310066 CDX1 JASPAR yes 118218452
chr1 3310067 3310082 TFAP2C JASPAR yes 26287836
chr1 3310067 3310082 TFAP2C JASPAR yes 118218453
chr1 3310073 3310084 FLI1 JASPAR yes 26287837
chr1 3310073 3310084 FLI1 JASPAR yes 118218454
chr1 3310074 3310082 EHF JASPAR yes 26287838
chr1 3310074 3310082 EHF JASPAR yes 118218455
chr1 3310094 3310112 E2F3 JASPAR yes 26287839
chr1 3310094 3310112 E2F3 JASPAR yes 118218456
chr1 3310098 3310108 CEBPG JASPAR yes 26287840
chr1 3310098 3310108 CEBPG JASPAR yes 118218457
chr1 3310105 3310113 HOXA5 JASPAR yes 26287841
chr1 3310105 3310113 HOXA5 JASPAR yes 118218458
chr1 3310128 3310139 NRF1 JASPAR yes 26287842
chr1 3310128 3310139 NRF1 JASPAR yes 118218459
chr1 3310133 3310144 NRF1 JASPAR yes 26287843
chr1 3310133 3310144 NRF1 JASPAR yes 118218460
chr1 3310141 3310153 HINFP JASPAR yes 26287844
chr1 3310141 3310153 HINFP JASPAR yes 118218461
chr1 3310144 3310148 H4TF2 TRANSFAC yes 26287845
chr1 3310144 3310148 H4TF2 TRANSFAC yes 118218462
chr1 3310153 3310158 SP1 TRANSFAC yes 26287846
chr1 3310153 3310158 SP1 TRANSFAC yes 118218463
chr1 3310183 3310189 SOX10 JASPAR yes 26287847
chr1 3310183 3310189 SOX10 JASPAR yes 118218464
chr1 3310192 3310197 ETS2 TRANSFAC yes 26287848
chr1 3310192 3310197 ETS2 TRANSFAC yes 118218465
chr1 3310206 3310212 SP1 TRANSFAC yes 26287849
chr1 3310206 3310212 SP1 TRANSFAC yes 118218466
chr1 3310245 3310259 GATA2 JASPAR yes 26287850
chr1 3310245 3310259 GATA2 JASPAR yes 118218467
chr1 3310247 3310253 GATA1 TRANSFAC yes 26287851
chr1 3310247 3310253 GATA1 TRANSFAC yes 118218468
chr1 3310247 3310255 GATA5 JASPAR yes 26287852
chr1 3310247 3310255 GATA5 JASPAR yes 118218469
chr1 3310252 3310267 ESR2 JASPAR yes 26287853
chr1 3310252 3310267 ESR2 JASPAR yes 118218470
chr1 3310256 3310262 SOX10 JASPAR yes 26287854
chr1 3310256 3310262 SOX10 JASPAR yes 118218471
SNP sites on vista110[chr1:3309990-3310261]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3310044 rs189206659 G A no 21630
chr1 3310101 rs536261817 T A
CEBPG E2F3
21631
chr1 3310176 rs553398766 G C no 21632
chr1 3310180 rs114307732 C G no 21633
chr1 3310182 rs545597143 G A no 21634
Genes possibly regulated by vista110[chr1:3309990-3310261]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 39271
Expression level of Genes
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miRNAs possibly regulated by vista110[chr1:3309990-3310261]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results