EnhancerDB
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  3. vista111[chr1:3325555-3326143]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista111[chr1:3325555-3326143]
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Tissue distribution of vista111
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Transcription factor that possibly regulate vista111[chr1:3325555-3326143]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3325566 3325586 TP63 JASPAR yes 118218472
chr1 3325567 3325585 TP53 JASPAR yes 118218473
chr1 3325569 3325584 TP53 JASPAR yes 118218474
chr1 3325576 3325580 LFA1 TRANSFAC yes 118218475
chr1 3325583 3325603 RREB1 JASPAR yes 118218476
chr1 3325594 3325606 GLI2 JASPAR yes 118218477
chr1 3325626 3325638 HES7 JASPAR yes 118218478
chr1 3325627 3325637 BHLHE40 JASPAR yes 118218479
chr1 3325627 3325637 BHLHE41 JASPAR yes 118218480
chr1 3325627 3325637 HEY1 JASPAR yes 118218481
chr1 3325627 3325637 HEY2 JASPAR yes 118218482
chr1 3325627 3325637 MLXIPL JASPAR yes 118218483
chr1 3325627 3325637 MNT JASPAR yes 118218484
chr1 3325627 3325637 TFE3 JASPAR yes 118218485
chr1 3325627 3325637 TFEB JASPAR yes 118218486
chr1 3325627 3325637 TFEC JASPAR yes 118218487
chr1 3325627 3325638 USF1 JASPAR yes 118218488
chr1 3325627 3325638 USF2 JASPAR yes 118218489
chr1 3325628 3325638 MAX JASPAR yes 118218490
chr1 3325629 3325634 MYC TRANSFAC yes 118218491
chr1 3325629 3325634 USF1 TRANSFAC yes 118218492
chr1 3325629 3325634 USF2 TRANSFAC yes 118218493
chr1 3325632 3325640 MEIS2 JASPAR yes 118218494
chr1 3325632 3325640 MEIS3 JASPAR yes 118218495
chr1 3325642 3325654 GLI2 JASPAR yes 118218496
chr1 3325648 3325660 HES5 JASPAR yes 118218497
chr1 3325649 3325659 HEY1 JASPAR yes 118218498
chr1 3325649 3325659 HEY2 JASPAR yes 118218499
chr1 3325668 3325680 GLI2 JASPAR yes 118218500
chr1 3325671 3325691 RREB1 JASPAR yes 118218501
chr1 3325693 3325713 RREB1 JASPAR yes 118218502
chr1 3325695 3325715 RREB1 JASPAR yes 118218503
chr1 3325703 3325723 RREB1 JASPAR yes 118218504
chr1 3325705 3325725 RREB1 JASPAR yes 118218505
chr1 3325709 3325729 RREB1 JASPAR yes 118218506
chr1 3325713 3325733 RREB1 JASPAR yes 118218507
chr1 3325727 3325736 HIC2 JASPAR yes 118218508
chr1 3325730 3325734 LFA1 TRANSFAC yes 118218509
chr1 3325730 3325740 MAX JASPAR yes 118218510
chr1 3325730 3325741 USF2 JASPAR yes 118218511
chr1 3325731 3325741 BHLHE40 JASPAR yes 118218512
chr1 3325731 3325741 BHLHE41 JASPAR yes 118218513
chr1 3325731 3325741 HEY1 JASPAR yes 118218514
chr1 3325731 3325741 MLX JASPAR yes 118218515
chr1 3325731 3325741 TFE3 JASPAR yes 118218516
chr1 3325731 3325741 TFEB JASPAR yes 118218517
chr1 3325731 3325741 TFEC JASPAR yes 118218518
chr1 3325733 3325738 MYC TRANSFAC yes 118218519
chr1 3325733 3325738 USF1 TRANSFAC yes 118218520
chr1 3325733 3325738 USF2 TRANSFAC yes 118218521
chr1 3325760 3325772 GLI2 JASPAR yes 118218522
chr1 3325763 3325783 RREB1 JASPAR yes 118218523
chr1 3325771 3325791 RREB1 JASPAR yes 118218524
chr1 3325773 3325793 RREB1 JASPAR yes 118218525
chr1 3325787 3325798 TBX20 JASPAR yes 118218526
chr1 3325787 3325798 TBX2 JASPAR yes 118218527
chr1 3325788 3325796 MGA JASPAR yes 118218528
chr1 3325788 3325796 TBX15 JASPAR yes 118218529
chr1 3325788 3325796 TBX1 JASPAR yes 118218530
chr1 3325788 3325796 TBX4 JASPAR yes 118218531
chr1 3325788 3325796 TBX5 JASPAR yes 118218532
chr1 3325793 3325813 RREB1 JASPAR yes 118218533
chr1 3325798 3325812 PLAG1 JASPAR yes 118218534
chr1 3325809 3325813 LFA1 TRANSFAC yes 118218535
chr1 3325831 3325843 E2F8 JASPAR yes 118218536
chr1 3325851 3325866 TFAP2A JASPAR yes 118218537
chr1 3325854 3325866 TFAP2A JASPAR yes 118218538
chr1 3325854 3325866 TFAP2B JASPAR yes 118218539
chr1 3325854 3325866 TFAP2C JASPAR yes 118218540
chr1 3325870 3325887 RXRA JASPAR yes 118218541
chr1 3325883 3325894 FOXB1 JASPAR yes 118218542
chr1 3325884 3325888 YY1 TRANSFAC yes 118218543
chr1 3325893 3325903 SP1 JASPAR yes 118218544
chr1 3325899 3325910 EBF1 JASPAR yes 118218545
chr1 3325908 3325912 ESR1 TRANSFAC yes 118218546
chr1 3325908 3325919 USF1 JASPAR yes 118218547
chr1 3325908 3325919 USF2 JASPAR yes 118218548
chr1 3325909 3325916 USF2 TRANSFAC yes 118218549
chr1 3325911 3325916 USF2 TRANSFAC yes 118218550
chr1 3325914 3325918 NFE TRANSFAC yes 118218551
chr1 3325924 3325943 REST JASPAR yes 118218552
chr1 3325928 3325939 EBF1 JASPAR yes 118218553
chr1 3325939 3325943 LFA1 TRANSFAC yes 118218554
chr1 3325955 3325970 HNF4G JASPAR yes 118218555
chr1 3325960 3325966 SOX10 JASPAR yes 118218556
chr1 3325989 3325994 SP1 TRANSFAC yes 118218557
chr1 3325992 3325998 SP1 TRANSFAC yes 118218558
chr1 3326010 3326021 FLI1 JASPAR yes 118218559
chr1 3326011 3326019 EHF JASPAR yes 118218560
chr1 3326027 3326042 MEF2C JASPAR yes 118218561
chr1 3326028 3326043 FOXA1 JASPAR yes 118218562
chr1 3326028 3326043 MEF2A JASPAR yes 118218563
chr1 3326029 3326040 FOXB1 JASPAR yes 118218564
chr1 3326029 3326040 FOXC1 JASPAR yes 118218565
chr1 3326029 3326041 FOXC2 JASPAR yes 118218566
chr1 3326029 3326041 MEF2A JASPAR yes 118218567
chr1 3326029 3326041 MEF2B JASPAR yes 118218568
chr1 3326029 3326041 MEF2D JASPAR yes 118218569
chr1 3326030 3326040 MEF2A JASPAR yes 118218570
chr1 3326030 3326042 FOXI1 JASPAR yes 118218571
chr1 3326031 3326035 TEAD2 TRANSFAC yes 118218572
chr1 3326031 3326036 TBP TRANSFAC yes 118218573
chr1 3326031 3326037 TMF TRANSFAC yes 118218574
chr1 3326048 3326054 TCF4 TRANSFAC yes 118218575
chr1 3326052 3326067 AR JASPAR yes 118218576
chr1 3326067 3326077 MZF1 JASPAR yes 118218577
chr1 3326115 3326120 H4TF1 TRANSFAC yes 118218578
SNP sites on vista111[chr1:3325555-3326143]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3325580 rs7521376 C T
LFA1 TP53 TP63
21811
chr1 3325581 rs2493299 A G
TP53 TP63
21812
chr1 3325586 rs572533267 AGTGT A
RREB1 TP63
21813
chr1 3325618 rs555386607 C T no 21814
chr1 3325650 rs7512522 G A
GLI2 HES5 HEY1 HEY2
21815
chr1 3325654 rs200063940 CGT C
GLI2 HES5 HEY1 HEY2
21816
chr1 3325658 rs542090113 T C
HES5 HEY1 HEY2
21817
chr1 3325659 rs35396425 C T
HES5 HEY1 HEY2
21818
chr1 3325668 rs55929648 C T
GLI2
21819
chr1 3325669 rs112870823 G A
GLI2
21820
chr1 3325692 rs61650876 CATGT C no 21821
chr1 3325712 rs564751070 GGTGT G
RREB1
21822
chr1 3325721 rs116100137 G T
RREB1
21823
chr1 3325722 rs549914581 A T
RREB1
21824
chr1 3325748 rs146991767 CGT C no 21825
chr1 3325749 rs569835622 G A no 21826
chr1 3325762 rs562372067 AGT A
GLI2
21827
chr1 3325771 rs535665974 G A
GLI2 RREB1
21828
chr1 3325790 rs555611720 G T
MGA RREB1 TBX1 TBX15 TBX2 TBX20 TBX4 TBX5
21829
chr1 3325798 rs562387491 AGT A
PLAG1 RREB1 TBX2 TBX20
21830
chr1 3325801 rs370542037 G C
PLAG1 RREB1
21831
chr1 3325878 rs59691927 C G,T
RXRA
21832
chr1 3325912 rs2493298 C A
ESR1 USF1 USF2
21833
chr1 3325991 rs150443003 C T
SP1
21834
chr1 3326094 rs36070715 C G no 21835
chr1 3326134 rs76716120 A G no 21836
chr1 3326142 rs60965010 G A no 21837
Genes possibly regulated by vista111[chr1:3325555-3326143]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 55153
Expression level of Genes
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miRNAs possibly regulated by vista111[chr1:3325555-3326143]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results