EnhancerDB
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  3. vista112[chr1:3373716-3374006]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista112[chr1:3373716-3374006]
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Tissue distribution of vista112
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Transcription factor that possibly regulate vista112[chr1:3373716-3374006]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3373166 3374394 POLR2A UCSC Txn Factor no Conserved 107801858
chr1 3373728 3373748 TP53 JASPAR yes 26289762
chr1 3373728 3373748 TP53 JASPAR yes 118218579
chr1 3373741 3373750 H4TF2 TRANSFAC yes 26289763
chr1 3373741 3373750 H4TF2 TRANSFAC yes 118218580
chr1 3373775 3373787 E2F8 JASPAR yes 26289764
chr1 3373775 3373787 E2F8 JASPAR yes 118218581
chr1 3373781 3373785 LFA1 TRANSFAC yes 26289765
chr1 3373781 3373785 LFA1 TRANSFAC yes 118218582
chr1 3373799 3373810 ESRRA JASPAR yes 26289766
chr1 3373799 3373810 ESRRA JASPAR yes 118218583
chr1 3373803 3373807 LFA1 TRANSFAC yes 26289767
chr1 3373803 3373807 LFA1 TRANSFAC yes 118218584
chr1 3373845 3373857 PKNOX2 JASPAR yes 26289768
chr1 3373845 3373857 PKNOX2 JASPAR yes 118218585
chr1 3373846 3373855 SNAI2 JASPAR yes 26289769
chr1 3373846 3373855 SNAI2 JASPAR yes 118218586
chr1 3373846 3373856 ID4 JASPAR yes 26289770
chr1 3373846 3373856 TCF3 JASPAR yes 26289771
chr1 3373846 3373856 TCF4 JASPAR yes 26289772
chr1 3373846 3373856 ID4 JASPAR yes 118218587
chr1 3373846 3373856 TCF3 JASPAR yes 118218588
chr1 3373846 3373856 TCF4 JASPAR yes 118218589
chr1 3373849 3373862 SMAD2 JASPAR yes 26289773
chr1 3373849 3373862 SMAD2 JASPAR yes 118218590
chr1 3373862 3373881 PAX5 JASPAR yes 26289774
chr1 3373862 3373881 PAX5 JASPAR yes 118218591
chr1 3373864 3373879 ZIC4 JASPAR yes 26289775
chr1 3373864 3373879 ZIC4 JASPAR yes 118218592
chr1 3373874 3373888 PLAG1 JASPAR yes 26289776
chr1 3373874 3373888 PLAG1 JASPAR yes 118218593
chr1 3373876 3373890 GLIS2 JASPAR yes 26289777
chr1 3373876 3373890 GLIS2 JASPAR yes 118218594
chr1 3373880 3373900 ESR1 JASPAR yes 26289778
chr1 3373880 3373900 ESR1 JASPAR yes 118218595
chr1 3373883 3373901 ESR1 JASPAR yes 26289779
chr1 3373883 3373901 ESR2 JASPAR yes 26289780
chr1 3373883 3373901 ESR1 JASPAR yes 118218596
chr1 3373883 3373901 ESR2 JASPAR yes 118218597
chr1 3373884 3373901 ESR1 JASPAR yes 26289781
chr1 3373884 3373901 ESR1 JASPAR yes 118218598
chr1 3373884 3373902 ESR1 JASPAR yes 26289782
chr1 3373884 3373902 ESR2 JASPAR yes 26289783
chr1 3373884 3373902 ESR1 JASPAR yes 118218599
chr1 3373884 3373902 ESR2 JASPAR yes 118218600
chr1 3373885 3373900 ESR2 JASPAR yes 26289784
chr1 3373885 3373900 ESR2 JASPAR yes 118218601
chr1 3373885 3373905 ESR1 JASPAR yes 26289785
chr1 3373885 3373905 ESR1 JASPAR yes 118218602
chr1 3373886 3373890 ESR1 TRANSFAC yes 26289786
chr1 3373886 3373890 ESR1 TRANSFAC yes 118218603
chr1 3373921 3373927 HiNF-A TRANSFAC yes 26289787
chr1 3373921 3373927 HiNF-A TRANSFAC yes 118218604
chr1 3373923 3373938 TFAP2A JASPAR yes 26289788
chr1 3373923 3373938 TFAP2A JASPAR yes 118218605
chr1 3373925 3373940 TFAP2A JASPAR yes 26289789
chr1 3373925 3373940 TFAP2C JASPAR yes 26289790
chr1 3373925 3373940 TFAP2A JASPAR yes 118218606
chr1 3373925 3373940 TFAP2C JASPAR yes 118218607
chr1 3373926 3373937 TFAP2A JASPAR yes 26289791
chr1 3373926 3373937 TFAP2B JASPAR yes 26289792
chr1 3373926 3373937 TFAP2C JASPAR yes 26289793
chr1 3373926 3373937 TFAP2A JASPAR yes 118218608
chr1 3373926 3373937 TFAP2B JASPAR yes 118218609
chr1 3373926 3373937 TFAP2C JASPAR yes 118218610
chr1 3373926 3373938 TFAP2A JASPAR yes 26289794
chr1 3373926 3373938 TFAP2B JASPAR yes 26289795
chr1 3373926 3373938 TFAP2C JASPAR yes 26289796
chr1 3373926 3373938 TFAP2A JASPAR yes 118218611
chr1 3373926 3373938 TFAP2B JASPAR yes 118218612
chr1 3373926 3373938 TFAP2C JASPAR yes 118218613
chr1 3373934 3373939 SP1 TRANSFAC yes 26289797
chr1 3373934 3373939 SP1 TRANSFAC yes 118218614
chr1 3373939 3373949 MAX JASPAR yes 26289798
chr1 3373939 3373949 MAX JASPAR yes 118218615
chr1 3373972 3373975 MYB TRANSFAC yes 26289799
chr1 3373972 3373975 MYB TRANSFAC yes 118218616
chr1 3373981 3373985 LFA1 TRANSFAC yes 26289800
chr1 3373981 3373985 LFA1 TRANSFAC yes 118218617
chr1 3373995 3373999 LFA1 TRANSFAC yes 26289801
chr1 3373995 3373999 LFA1 TRANSFAC yes 118218618
chr1 3374004 3374008 H4TF2 TRANSFAC yes 26289802
chr1 3374004 3374008 H4TF2 TRANSFAC yes 118218619
SNP sites on vista112[chr1:3373716-3374006]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3373726 rs376750514 A G
POLR2A
22191
chr1 3373867 rs532886428 C T
PAX5 POLR2A ZIC4
22192
chr1 3373967 rs2493256 A G
POLR2A
22193
chr1 3373977 rs116420967 C T
POLR2A
22194
Genes possibly regulated by vista112[chr1:3373716-3374006]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 97274
Expression level of Genes
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miRNAs possibly regulated by vista112[chr1:3373716-3374006]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results