EnhancerDB
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  3. vista114[chr1:3377166-3377446]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista114[chr1:3377166-3377446]
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Tissue distribution of vista114
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Transcription factor that possibly regulate vista114[chr1:3377166-3377446]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3377172 3377186 TLX1 JASPAR yes 26290249
chr1 3377172 3377186 TLX1 JASPAR yes 118218679
chr1 3377176 3377186 SMAD3 JASPAR yes 26290250
chr1 3377176 3377186 SMAD3 JASPAR yes 118218680
chr1 3377196 3377202 HiNF-A TRANSFAC yes 26290251
chr1 3377196 3377202 HiNF-A TRANSFAC yes 118218681
chr1 3377203 3377208 H4TF1 TRANSFAC yes 26290252
chr1 3377203 3377208 H4TF1 TRANSFAC yes 118218682
chr1 3377233 3377247 ZIC1 JASPAR yes 26290253
chr1 3377233 3377247 ZIC1 JASPAR yes 118218683
chr1 3377233 3377248 ZIC3 JASPAR yes 26290254
chr1 3377233 3377248 ZIC4 JASPAR yes 26290255
chr1 3377233 3377248 ZIC3 JASPAR yes 118218684
chr1 3377233 3377248 ZIC4 JASPAR yes 118218685
chr1 3377269 3377287 ESR1 JASPAR yes 26290256
chr1 3377269 3377287 ESR1 JASPAR yes 118218686
chr1 3377286 3377290 ESR1 TRANSFAC yes 26290257
chr1 3377286 3377290 ESR1 TRANSFAC yes 118218687
chr1 3377287 3377308 REST JASPAR yes 26290258
chr1 3377287 3377308 REST JASPAR yes 118218688
chr1 3377291 3377311 ESR1 JASPAR yes 26290259
chr1 3377291 3377311 ESR1 JASPAR yes 118218689
chr1 3377302 3377317 TFAP2A JASPAR yes 26290260
chr1 3377302 3377317 TFAP2C JASPAR yes 26290261
chr1 3377302 3377317 TFAP2A JASPAR yes 118218690
chr1 3377302 3377317 TFAP2C JASPAR yes 118218691
chr1 3377305 3377317 TFAP2A JASPAR yes 26290262
chr1 3377305 3377317 TFAP2B JASPAR yes 26290263
chr1 3377305 3377317 TFAP2C JASPAR yes 26290264
chr1 3377305 3377317 TFAP2A JASPAR yes 118218692
chr1 3377305 3377317 TFAP2B JASPAR yes 118218693
chr1 3377305 3377317 TFAP2C JASPAR yes 118218694
chr1 3377305 3377319 EBF1 JASPAR yes 26290265
chr1 3377305 3377319 EBF1 JASPAR yes 118218695
chr1 3377305 3377320 TFAP2A JASPAR yes 26290266
chr1 3377305 3377320 TFAP2A JASPAR yes 118218696
chr1 3377306 3377315 TFAP2A JASPAR yes 26290267
chr1 3377306 3377315 TFAP2A JASPAR yes 118218697
chr1 3377306 3377321 ZIC3 JASPAR yes 26290268
chr1 3377306 3377321 ZIC3 JASPAR yes 118218698
chr1 3377334 3377345 ESRRA JASPAR yes 26290269
chr1 3377334 3377345 ESRRA JASPAR yes 118218699
chr1 3377335 3377339 NFE TRANSFAC yes 26290270
chr1 3377335 3377339 NFE TRANSFAC yes 118218700
chr1 3377351 3377363 TEAD1 JASPAR yes 26290271
chr1 3377351 3377363 TEAD1 JASPAR yes 118218701
chr1 3377353 3377363 TEAD1 JASPAR yes 26290272
chr1 3377353 3377363 TEAD4 JASPAR yes 26290273
chr1 3377353 3377363 TEAD1 JASPAR yes 118218702
chr1 3377353 3377363 TEAD4 JASPAR yes 118218703
chr1 3377354 3377362 TEAD3 JASPAR yes 26290274
chr1 3377354 3377362 TEAD3 JASPAR yes 118218704
chr1 3377363 3377375 TEAD1 JASPAR yes 26290275
chr1 3377363 3377375 TEAD1 JASPAR yes 118218705
chr1 3377365 3377375 TEAD1 JASPAR yes 26290276
chr1 3377365 3377375 TEAD4 JASPAR yes 26290277
chr1 3377365 3377375 TEAD1 JASPAR yes 118218706
chr1 3377365 3377375 TEAD4 JASPAR yes 118218707
chr1 3377366 3377374 TEAD3 JASPAR yes 26290278
chr1 3377366 3377374 TEAD3 JASPAR yes 118218708
chr1 3377392 3377397 SP1 TRANSFAC yes 26290279
chr1 3377392 3377397 SP1 TRANSFAC yes 118218709
chr1 3377400 3377415 TFAP2A JASPAR yes 26290280
chr1 3377400 3377415 TFAP2A JASPAR yes 118218710
chr1 3377402 3377417 TFAP2C JASPAR yes 26290281
chr1 3377402 3377417 TFAP2C JASPAR yes 118218711
chr1 3377403 3377414 EBF1 JASPAR yes 26290282
chr1 3377403 3377414 EBF1 JASPAR yes 118218712
chr1 3377404 3377413 TFAP2A JASPAR yes 26290283
chr1 3377404 3377413 TFAP2A JASPAR yes 118218713
chr1 3377408 3377413 SP1 TRANSFAC yes 26290284
chr1 3377408 3377413 SP1 TRANSFAC yes 118218714
chr1 3377426 3377438 HES5 JASPAR yes 26290285
chr1 3377426 3377438 HES7 JASPAR yes 26290286
chr1 3377426 3377438 HES5 JASPAR yes 118218715
chr1 3377426 3377438 HES7 JASPAR yes 118218716
chr1 3377427 3377437 BHLHE40 JASPAR yes 26290287
chr1 3377427 3377437 BHLHE41 JASPAR yes 26290288
chr1 3377427 3377437 HEY1 JASPAR yes 26290289
chr1 3377427 3377437 HEY2 JASPAR yes 26290290
chr1 3377427 3377437 MAX JASPAR yes 26290291
chr1 3377427 3377437 MNT JASPAR yes 26290292
chr1 3377427 3377437 TFE3 JASPAR yes 26290293
chr1 3377427 3377437 BHLHE40 JASPAR yes 118218717
chr1 3377427 3377437 BHLHE41 JASPAR yes 118218718
chr1 3377427 3377437 HEY1 JASPAR yes 118218719
chr1 3377427 3377437 HEY2 JASPAR yes 118218720
chr1 3377427 3377437 MAX JASPAR yes 118218721
chr1 3377427 3377437 MNT JASPAR yes 118218722
chr1 3377427 3377437 TFE3 JASPAR yes 118218723
chr1 3377429 3377434 MYC TRANSFAC yes 26290294
chr1 3377429 3377434 USF1 TRANSFAC yes 26290295
chr1 3377429 3377434 USF2 TRANSFAC yes 26290296
chr1 3377429 3377434 MYC TRANSFAC yes 118218724
chr1 3377429 3377434 USF1 TRANSFAC yes 118218725
chr1 3377429 3377434 USF2 TRANSFAC yes 118218726
chr1 3377435 3377443 EHF JASPAR yes 26290297
chr1 3377435 3377443 EHF JASPAR yes 118218727
SNP sites on vista114[chr1:3377166-3377446]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3377238 rs79162847 C T
ZIC1 ZIC3 ZIC4
22246
chr1 3377288 rs12568681 G A
ESR1 REST
22247
chr1 3377334 rs374217889 C T
ESRRA
22248
chr1 3377343 rs2487681 T C
ESRRA
22249
chr1 3377386 rs560179925 C T no 22250
chr1 3377442 rs2487680 T C
EHF
22251
Genes possibly regulated by vista114[chr1:3377166-3377446]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 93824
Expression level of Genes
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miRNAs possibly regulated by vista114[chr1:3377166-3377446]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results