EnhancerDB
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  3. vista115[chr1:3398864-3399114]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista115[chr1:3398864-3399114]
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Tissue distribution of vista115
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Transcription factor that possibly regulate vista115[chr1:3398864-3399114]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3398853 3398873 RREB1 JASPAR yes 26290696
chr1 3398853 3398873 RREB1 JASPAR yes 118218728
chr1 3398855 3398875 RREB1 JASPAR yes 26290697
chr1 3398855 3398875 RREB1 JASPAR yes 118218729
chr1 3398857 3398877 RREB1 JASPAR yes 26290698
chr1 3398857 3398877 RREB1 JASPAR yes 118218730
chr1 3398860 3398880 RREB1 JASPAR yes 26290699
chr1 3398860 3398880 RREB1 JASPAR yes 118218731
chr1 3398863 3398883 RREB1 JASPAR yes 26290700
chr1 3398863 3398883 RREB1 JASPAR yes 118218732
chr1 3398865 3398885 RREB1 JASPAR yes 26290701
chr1 3398865 3398885 RREB1 JASPAR yes 118218733
chr1 3398867 3398887 RREB1 JASPAR yes 26290702
chr1 3398867 3398887 RREB1 JASPAR yes 118218734
chr1 3398868 3398878 ZNF740 JASPAR yes 26290703
chr1 3398868 3398878 ZNF740 JASPAR yes 118218735
chr1 3398871 3398885 PLAG1 JASPAR yes 26290704
chr1 3398871 3398885 PLAG1 JASPAR yes 118218736
chr1 3398872 3398879 SP1 TRANSFAC yes 26290705
chr1 3398872 3398879 SP1 TRANSFAC yes 118218737
chr1 3398872 3398882 SP1 JASPAR yes 26290706
chr1 3398872 3398882 SP1 JASPAR yes 118218738
chr1 3398872 3398893 ZNF263 JASPAR yes 26290707
chr1 3398872 3398893 ZNF263 JASPAR yes 118218739
chr1 3398873 3398881 SP1 TRANSFAC yes 26290708
chr1 3398873 3398881 SP1 TRANSFAC yes 118218740
chr1 3398874 3398879 SP1 TRANSFAC yes 26290709
chr1 3398874 3398879 SP1 TRANSFAC yes 118218741
chr1 3398874 3398885 E2F4 JASPAR yes 26290710
chr1 3398874 3398885 E2F4 JASPAR yes 118218742
chr1 3398875 3398880 SP1 TRANSFAC yes 26290711
chr1 3398875 3398880 SP1 TRANSFAC yes 118218743
chr1 3398875 3398881 SP1 TRANSFAC yes 26290712
chr1 3398875 3398881 SP1 TRANSFAC yes 118218744
chr1 3398875 3398885 SP1 JASPAR yes 26290713
chr1 3398875 3398885 SP1 JASPAR yes 118218745
chr1 3398876 3398886 ZNF740 JASPAR yes 26290714
chr1 3398876 3398886 ZNF740 JASPAR yes 118218746
chr1 3398880 3398887 SP1 TRANSFAC yes 26290715
chr1 3398880 3398887 SP1 TRANSFAC yes 118218747
chr1 3398882 3398887 SP1 TRANSFAC yes 26290716
chr1 3398882 3398887 SP1 TRANSFAC yes 118218748
chr1 3398883 3398888 SP1 TRANSFAC yes 26290717
chr1 3398883 3398888 SP1 TRANSFAC yes 118218749
chr1 3398890 3398902 INSM1 JASPAR yes 26290718
chr1 3398890 3398902 INSM1 JASPAR yes 118218750
chr1 3398897 3398901 LFA1 TRANSFAC yes 26290719
chr1 3398897 3398901 LFA1 TRANSFAC yes 118218751
chr1 3398916 3398928 NHLH1 JASPAR yes 26290720
chr1 3398916 3398928 NHLH1 JASPAR yes 118218752
chr1 3398917 3398927 NHLH1 JASPAR yes 26290721
chr1 3398917 3398927 NHLH1 JASPAR yes 118218753
chr1 3398931 3398943 TFAP2A JASPAR yes 26290722
chr1 3398931 3398943 TFAP2B JASPAR yes 26290723
chr1 3398931 3398943 TFAP2C JASPAR yes 26290724
chr1 3398931 3398943 TFAP2A JASPAR yes 118218754
chr1 3398931 3398943 TFAP2B JASPAR yes 118218755
chr1 3398931 3398943 TFAP2C JASPAR yes 118218756
chr1 3398933 3398942 TFAP2A JASPAR yes 26290725
chr1 3398933 3398942 TFAP2A JASPAR yes 118218757
chr1 3398938 3398943 SP1 TRANSFAC yes 26290726
chr1 3398938 3398943 SP1 TRANSFAC yes 118218758
chr1 3398949 3398959 NFIA JASPAR yes 26290727
chr1 3398949 3398959 NFIA JASPAR yes 118218759
chr1 3398951 3398957 NFIC JASPAR yes 26290728
chr1 3398951 3398957 NFIC JASPAR yes 118218760
chr1 3398956 3398973 RARA JASPAR yes 26290729
chr1 3398956 3398973 RXRA JASPAR yes 26290730
chr1 3398956 3398973 RARA JASPAR yes 118218761
chr1 3398956 3398973 RXRA JASPAR yes 118218762
chr1 3398964 3398974 SREBF1 JASPAR yes 26290731
chr1 3398964 3398974 SREBF1 JASPAR yes 118218763
chr1 3398980 3398985 SP1 TRANSFAC yes 26290732
chr1 3398980 3398985 SP1 TRANSFAC yes 118218764
chr1 3398997 3399012 HNF4A JASPAR yes 26290733
chr1 3398997 3399012 HNF4A JASPAR yes 118218765
chr1 3398998 3399012 NR2F1 JASPAR yes 26290734
chr1 3398998 3399012 RXRB JASPAR yes 26290735
chr1 3398998 3399012 NR2F1 JASPAR yes 118218766
chr1 3398998 3399012 RXRB JASPAR yes 118218767
chr1 3398998 3399013 HNF4G JASPAR yes 26290736
chr1 3398998 3399013 HNF4G JASPAR yes 118218768
chr1 3399004 3399011 JUN TRANSFAC yes 26290737
chr1 3399004 3399011 JUN TRANSFAC yes 118218769
chr1 3399004 3399019 ESR2 JASPAR yes 26290738
chr1 3399004 3399019 ESR2 JASPAR yes 118218770
chr1 3399011 3399026 JUND JASPAR yes 26290739
chr1 3399011 3399026 JUND JASPAR yes 118218771
chr1 3399012 3399020 NR4A2 JASPAR yes 26290740
chr1 3399012 3399020 NR4A2 JASPAR yes 118218772
chr1 3399012 3399025 JUN JASPAR yes 26290741
chr1 3399012 3399025 JUN JASPAR yes 118218773
chr1 3399013 3399021 CREB1 JASPAR yes 26290742
chr1 3399013 3399021 CREB1 JASPAR yes 118218774
chr1 3399031 3399042 ESRRA JASPAR yes 26290743
chr1 3399031 3399042 ESRRA JASPAR yes 118218775
chr1 3399033 3399048 TFAP2A JASPAR yes 26290744
chr1 3399033 3399048 TFAP2A JASPAR yes 118218776
chr1 3399039 3399059 ESR1 JASPAR yes 26290745
chr1 3399039 3399059 ESR1 JASPAR yes 118218777
chr1 3399040 3399044 LFA1 TRANSFAC yes 26290746
chr1 3399040 3399044 LFA1 TRANSFAC yes 118218778
chr1 3399041 3399052 USF1 JASPAR yes 26290747
chr1 3399041 3399052 USF2 JASPAR yes 26290748
chr1 3399041 3399052 USF1 JASPAR yes 118218779
chr1 3399041 3399052 USF2 JASPAR yes 118218780
chr1 3399041 3399055 JUN JASPAR yes 26290749
chr1 3399041 3399055 JUN JASPAR yes 118218781
chr1 3399044 3399055 FOSL2 JASPAR yes 26290750
chr1 3399044 3399055 JUNB JASPAR yes 26290751
chr1 3399044 3399055 FOSL2 JASPAR yes 118218782
chr1 3399044 3399055 JUNB JASPAR yes 118218783
chr1 3399044 3399059 ESR2 JASPAR yes 26290752
chr1 3399044 3399059 ESR2 JASPAR yes 118218784
chr1 3399045 3399056 FOS JASPAR yes 26290753
chr1 3399045 3399056 FOSL1 JASPAR yes 26290754
chr1 3399045 3399056 JUND JASPAR yes 26290755
chr1 3399045 3399056 FOS JASPAR yes 118218785
chr1 3399045 3399056 FOSL1 JASPAR yes 118218786
chr1 3399045 3399056 JUND JASPAR yes 118218787
chr1 3399046 3399053 JUN TRANSFAC yes 26290756
chr1 3399046 3399053 JUN TRANSFAC yes 118218788
chr1 3399046 3399057 JUNB JASPAR yes 26290757
chr1 3399046 3399057 NFE2L2 JASPAR yes 26290758
chr1 3399046 3399057 JUNB JASPAR yes 118218789
chr1 3399046 3399057 NFE2L2 JASPAR yes 118218790
chr1 3399046 3399060 JUN JASPAR yes 26290759
chr1 3399046 3399060 JUN JASPAR yes 118218791
chr1 3399047 3399058 BATF JASPAR yes 26290760
chr1 3399047 3399058 BATF JASPAR yes 118218792
chr1 3399102 3399114 INSM1 JASPAR yes 26290761
chr1 3399102 3399114 INSM1 JASPAR yes 118218793
chr1 3399109 3399113 LFA1 TRANSFAC yes 26290762
chr1 3399109 3399113 LFA1 TRANSFAC yes 118218794
SNP sites on vista115[chr1:3398864-3399114]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3398879 rs138984372 G GGGGGGGCGGGTAGCC
E2F4 PLAG1 RREB1 SP1 ZNF263 ZNF740
22366
chr1 3398879 rs58188396 G GGGGGGGCGGGTAGCC
E2F4 PLAG1 RREB1 SP1 ZNF263 ZNF740
22367
chr1 3398984 rs11579276 C T
SP1
22368
chr1 3399063 rs147906997 G A no 22369
Genes possibly regulated by vista115[chr1:3398864-3399114]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 72126
Expression level of Genes
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miRNAs possibly regulated by vista115[chr1:3398864-3399114]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results