EnhancerDB
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  3. vista116[chr1:3420761-3421065]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista116[chr1:3420761-3421065]
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Tissue distribution of vista116
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Transcription factor that possibly regulate vista116[chr1:3420761-3421065]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3420758 3420762 ESR1 TRANSFAC yes 26291792
chr1 3420758 3420762 ESR1 TRANSFAC yes 118218795
chr1 3420767 3420771 ESR1 TRANSFAC yes 26291793
chr1 3420767 3420771 ESR1 TRANSFAC yes 118218796
chr1 3420779 3420792 TFAP2A JASPAR yes 26291794
chr1 3420779 3420792 TFAP2A JASPAR yes 118218797
chr1 3420799 3420814 NFYB JASPAR yes 26291795
chr1 3420799 3420814 NFYB JASPAR yes 118218798
chr1 3420801 3420817 NFYA JASPAR yes 26291796
chr1 3420801 3420817 NFYA JASPAR yes 118218799
chr1 3420802 3420820 NFYA JASPAR yes 26291797
chr1 3420802 3420820 NFYA JASPAR yes 118218800
chr1 3420806 3420810 H1TF2 TRANSFAC yes 26291798
chr1 3420806 3420810 NFE TRANSFAC yes 26291799
chr1 3420806 3420810 SRF TRANSFAC yes 26291800
chr1 3420806 3420810 H1TF2 TRANSFAC yes 118218801
chr1 3420806 3420810 NFE TRANSFAC yes 118218802
chr1 3420806 3420810 SRF TRANSFAC yes 118218803
chr1 3420829 3420849 TP53 JASPAR yes 26291801
chr1 3420829 3420849 TP53 JASPAR yes 118218804
chr1 3420830 3420839 NFIX JASPAR yes 26291802
chr1 3420830 3420839 NFIX JASPAR yes 118218805
chr1 3420832 3420838 NFIC JASPAR yes 26291803
chr1 3420832 3420838 NFIC JASPAR yes 118218806
chr1 3420837 3420857 TP63 JASPAR yes 26291804
chr1 3420837 3420857 TP63 JASPAR yes 118218807
chr1 3420887 3420891 YY1 TRANSFAC yes 26291805
chr1 3420887 3420891 YY1 TRANSFAC yes 118218808
chr1 3420887 3420898 NFE2 JASPAR yes 26291806
chr1 3420887 3420898 NFE2 JASPAR yes 118218809
chr1 3420888 3420897 JDP2 JASPAR yes 26291807
chr1 3420888 3420897 JDP2 JASPAR yes 118218810
chr1 3420909 3420914 ETS2 TRANSFAC yes 26291808
chr1 3420909 3420914 ETS2 TRANSFAC yes 118218811
chr1 3420910 3420927 ZNF410 JASPAR yes 26291809
chr1 3420910 3420927 ZNF410 JASPAR yes 118218812
chr1 3420940 3420950 REL JASPAR yes 118218813
chr1 3420940 3420951 NFKB1 JASPAR yes 118218814
chr1 3420943 3420947 YY1 TRANSFAC yes 118218815
chr1 3420944 3420952 FEV JASPAR yes 118218816
chr1 3420949 3420953 NFE TRANSFAC yes 118218817
chr1 3420950 3420955 GATA2 JASPAR yes 118218818
chr1 3420956 3420960 ESR1 TRANSFAC yes 118218819
chr1 3420976 3420991 ZIC3 JASPAR yes 118218820
chr1 3421000 3421018 MAFF JASPAR yes 118218821
chr1 3421004 3421008 ESR1 TRANSFAC yes 118218822
chr1 3421024 3421036 GLI2 JASPAR yes 118218823
chr1 3421033 3421038 MYC TRANSFAC yes 118218824
chr1 3421036 3421052 RFX3 JASPAR yes 118218825
chr1 3421036 3421052 RFX4 JASPAR yes 118218826
chr1 3421054 3421065 E2F4 JASPAR yes 118218827
chr1 3421054 3421065 E2F6 JASPAR yes 118218828
SNP sites on vista116[chr1:3420761-3421065]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3420817 rs116728185 T C
NFYA
22533
chr1 3420879 rs149384874 C T no 22534
chr1 3420903 rs143709003 G A,T no 22535
chr1 3420985 rs114678287 G A
ZIC3
22536
Genes possibly regulated by vista116[chr1:3420761-3421065]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 50229
Expression level of Genes
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miRNAs possibly regulated by vista116[chr1:3420761-3421065]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results