EnhancerDB
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  3. vista1183[chr1:36489072-36489418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1183[chr1:36489072-36489418]
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Tissue distribution of vista1183
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Transcription factor that possibly regulate vista1183[chr1:36489072-36489418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 36489058 36489072 TCF7L2 JASPAR yes 28117323
chr1 36489058 36489072 TCF7L2 JASPAR yes 118271275
chr1 36489058 36489073 LEF1 JASPAR yes 28117324
chr1 36489058 36489073 LEF1 JASPAR yes 118271276
chr1 36489081 36489091 MAX JASPAR yes 28117326
chr1 36489081 36489091 MAX JASPAR yes 118271277
chr1 36489082 36489092 NEUROD2 JASPAR yes 28117327
chr1 36489082 36489092 NEUROD2 JASPAR yes 118271278
chr1 36489104 36489125 IRF1 JASPAR yes 28117328
chr1 36489104 36489125 IRF1 JASPAR yes 118271279
chr1 36489108 36489122 STAT1 JASPAR yes 28117329
chr1 36489108 36489122 STAT1 JASPAR yes 118271280
chr1 36489108 36489123 PRDM1 JASPAR yes 28117330
chr1 36489108 36489123 STAT2 JASPAR yes 28117331
chr1 36489108 36489123 PRDM1 JASPAR yes 118271281
chr1 36489108 36489123 STAT2 JASPAR yes 118271282
chr1 36489108 36489126 IRF2 JASPAR yes 28117332
chr1 36489108 36489126 IRF2 JASPAR yes 118271283
chr1 36489112 36489117 ETS2 TRANSFAC yes 28117333
chr1 36489112 36489117 ETS2 TRANSFAC yes 118271284
chr1 36489124 36489145 IRF1 JASPAR yes 28117334
chr1 36489124 36489145 IRF1 JASPAR yes 118271285
chr1 36489126 36489141 IRF9 JASPAR yes 28117335
chr1 36489126 36489141 IRF9 JASPAR yes 118271286
chr1 36489127 36489141 IRF7 JASPAR yes 28117336
chr1 36489127 36489141 IRF8 JASPAR yes 28117337
chr1 36489127 36489141 IRF7 JASPAR yes 118271287
chr1 36489127 36489141 IRF8 JASPAR yes 118271288
chr1 36489128 36489142 STAT1 JASPAR yes 28117338
chr1 36489128 36489142 STAT1 JASPAR yes 118271289
chr1 36489128 36489143 PRDM1 JASPAR yes 28117339
chr1 36489128 36489143 STAT2 JASPAR yes 28117340
chr1 36489128 36489143 PRDM1 JASPAR yes 118271290
chr1 36489128 36489143 STAT2 JASPAR yes 118271291
chr1 36489128 36489146 IRF2 JASPAR yes 28117341
chr1 36489128 36489146 IRF2 JASPAR yes 118271292
chr1 36489129 36489141 IRF1 JASPAR yes 28117342
chr1 36489129 36489141 IRF1 JASPAR yes 118271293
chr1 36489149 36489161 TAL1 JASPAR yes 28117343
chr1 36489149 36489161 TAL1 JASPAR yes 118271294
chr1 36489150 36489163 ZBTB18 JASPAR yes 28117344
chr1 36489150 36489163 ZBTB18 JASPAR yes 118271295
chr1 36489151 36489161 FIGLA JASPAR yes 28117345
chr1 36489151 36489161 MSC JASPAR yes 28117346
chr1 36489151 36489161 TFAP4 JASPAR yes 28117347
chr1 36489151 36489161 FIGLA JASPAR yes 118271296
chr1 36489151 36489161 MSC JASPAR yes 118271297
chr1 36489151 36489161 TFAP4 JASPAR yes 118271298
chr1 36489151 36489163 TAL1 JASPAR yes 28117348
chr1 36489151 36489163 TAL1 JASPAR yes 118271299
chr1 36489171 36489182 DMRT3 JASPAR yes 28117349
chr1 36489171 36489182 DMRT3 JASPAR yes 118271300
chr1 36489179 36489197 SRF JASPAR yes 28117350
chr1 36489179 36489197 SRF JASPAR yes 118271301
chr1 36489185 36489189 YY1 TRANSFAC yes 28117351
chr1 36489185 36489189 YY1 TRANSFAC yes 118271302
chr1 36489198 36489213 SCRT1 JASPAR yes 28117352
chr1 36489198 36489213 SCRT1 JASPAR yes 118271303
chr1 36489202 36489212 MYF6 JASPAR yes 28117353
chr1 36489202 36489212 MYF6 JASPAR yes 118271304
chr1 36489204 36489209 MYC TRANSFAC yes 28117354
chr1 36489204 36489209 MYC TRANSFAC yes 118271305
chr1 36489211 36489229 NFYA JASPAR yes 28117355
chr1 36489211 36489229 NFYA JASPAR yes 118271306
chr1 36489214 36489218 YY1 TRANSFAC yes 28117356
chr1 36489214 36489218 YY1 TRANSFAC yes 118271307
chr1 36489214 36489230 NFYA JASPAR yes 28117357
chr1 36489214 36489230 NFYA JASPAR yes 118271308
chr1 36489215 36489225 HOXA13 JASPAR yes 28117358
chr1 36489215 36489225 HOXB13 JASPAR yes 28117359
chr1 36489215 36489225 HOXD13 JASPAR yes 28117360
chr1 36489215 36489225 HOXA13 JASPAR yes 118271309
chr1 36489215 36489225 HOXB13 JASPAR yes 118271310
chr1 36489215 36489225 HOXD13 JASPAR yes 118271311
chr1 36489215 36489226 HOXA10 JASPAR yes 28117361
chr1 36489215 36489226 HOXA10 JASPAR yes 118271312
chr1 36489216 36489225 CDX1 JASPAR yes 28117362
chr1 36489216 36489225 CDX1 JASPAR yes 118271313
chr1 36489216 36489227 CDX2 JASPAR yes 28117363
chr1 36489216 36489227 CDX2 JASPAR yes 118271314
chr1 36489217 36489232 NFYB JASPAR yes 28117364
chr1 36489217 36489232 NFYB JASPAR yes 118271315
chr1 36489226 36489244 MAFF JASPAR yes 28117365
chr1 36489226 36489244 MAFF JASPAR yes 118271316
chr1 36489227 36489242 MAFK JASPAR yes 28117366
chr1 36489227 36489242 MAFK JASPAR yes 118271317
chr1 36489231 36489242 NRL JASPAR yes 28117367
chr1 36489231 36489242 NRL JASPAR yes 118271318
chr1 36489260 36489275 FOXP1 JASPAR yes 28117368
chr1 36489260 36489275 FOXP1 JASPAR yes 118271319
chr1 36489261 36489272 FOXP2 JASPAR yes 28117369
chr1 36489261 36489272 FOXP2 JASPAR yes 118271320
chr1 36489262 36489270 FOXD1 JASPAR yes 28117370
chr1 36489262 36489270 FOXG1 JASPAR yes 28117371
chr1 36489262 36489270 FOXO3 JASPAR yes 28117372
chr1 36489262 36489270 FOXD1 JASPAR yes 118271321
chr1 36489262 36489270 FOXG1 JASPAR yes 118271322
chr1 36489262 36489270 FOXO3 JASPAR yes 118271323
chr1 36489263 36489270 FOXD2 JASPAR yes 28117373
chr1 36489263 36489270 FOXI1 JASPAR yes 28117374
chr1 36489263 36489270 FOXL1 JASPAR yes 28117375
chr1 36489263 36489270 FOXO4 JASPAR yes 28117376
chr1 36489263 36489270 FOXO6 JASPAR yes 28117377
chr1 36489263 36489270 FOXP3 JASPAR yes 28117378
chr1 36489263 36489270 FOXD2 JASPAR yes 118271324
chr1 36489263 36489270 FOXI1 JASPAR yes 118271325
chr1 36489263 36489270 FOXL1 JASPAR yes 118271326
chr1 36489263 36489270 FOXO4 JASPAR yes 118271327
chr1 36489263 36489270 FOXO6 JASPAR yes 118271328
chr1 36489263 36489270 FOXP3 JASPAR yes 118271329
chr1 36489263 36489271 FOXO3 JASPAR yes 28117379
chr1 36489263 36489271 FOXO3 JASPAR yes 118271330
chr1 36489319 36489333 POU4F1 JASPAR yes 28117380
chr1 36489319 36489333 POU4F1 JASPAR yes 118271331
chr1 36489322 36489340 IRF2 JASPAR yes 28117381
chr1 36489322 36489340 IRF2 JASPAR yes 118271332
chr1 36489330 36489333 MYB TRANSFAC yes 28117382
chr1 36489330 36489333 MYB TRANSFAC yes 118271333
chr1 36489356 36489367 DMRT3 JASPAR yes 28117383
chr1 36489356 36489367 DMRT3 JASPAR yes 118271334
chr1 36489360 36489363 MYB TRANSFAC yes 28117384
chr1 36489360 36489363 MYB TRANSFAC yes 118271335
chr1 36489373 36489382 ZEB1 JASPAR yes 28117385
chr1 36489373 36489382 ZEB1 JASPAR yes 118271336
chr1 36489378 36489388 GSC2 JASPAR yes 28117386
chr1 36489378 36489388 GSC JASPAR yes 28117387
chr1 36489378 36489388 GSC2 JASPAR yes 118271337
chr1 36489378 36489388 GSC JASPAR yes 118271338
chr1 36489379 36489387 OTX1 JASPAR yes 28117388
chr1 36489379 36489387 OTX2 JASPAR yes 28117389
chr1 36489379 36489387 OTX1 JASPAR yes 118271339
chr1 36489379 36489387 OTX2 JASPAR yes 118271340
chr1 36489379 36489388 PITX3 JASPAR yes 28117390
chr1 36489379 36489388 PITX3 JASPAR yes 118271341
chr1 36489382 36489392 HMBOX1 JASPAR yes 28117391
chr1 36489382 36489392 HMBOX1 JASPAR yes 118271342
chr1 36489384 36489387 MYB TRANSFAC yes 28117392
chr1 36489384 36489387 MYB TRANSFAC yes 118271343
chr1 36489397 36489401 YY1 TRANSFAC yes 28117393
chr1 36489397 36489401 YY1 TRANSFAC yes 118271344
chr1 36489409 36489416 PEA3 TRANSFAC yes 28117394
chr1 36489409 36489416 PEA3 TRANSFAC yes 118271345
SNP sites on vista1183[chr1:36489072-36489418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 36489105 rs76440001 T G
IRF1
231241
chr1 36489114 rs139677485 A C
ETS2 IRF1 IRF2 PRDM1 STAT1 STAT2
231242
chr1 36489226 rs116305778 C T
CDX2 HOXA10 MAFF NFYA NFYB
231243
chr1 36489340 rs114711279 A G
IRF2
231244
Genes possibly regulated by vista1183[chr1:36489072-36489418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 36396319 36538101 + AGO3 ENSG00000126070.14 36396319 0.78 0.99 503 7247
chr1 36549676 36553876 + TEKT2 ENSG00000092850.7 36549676 0.9 1.0 504 39742
chr1 36554476 36559533 + ADPRHL2 ENSG00000116863.10 36554476 0.56 0.99 505 34942
Expression level of Genes
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miRNAs possibly regulated by vista1183[chr1:36489072-36489418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results