EnhancerDB
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  3. vista11908[chr11:123234100-123234303]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista11908[chr11:123234100-123234303]
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Tissue distribution of vista11908
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Transcription factor that possibly regulate vista11908[chr11:123234100-123234303]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 123234089 123234100 EBF1 JASPAR yes 42073263
chr11 123234089 123234100 EBF1 JASPAR yes 114147725
chr11 123234098 123234111 SMAD2 JASPAR yes 42073264
chr11 123234098 123234111 SMAD2 JASPAR yes 114147726
chr11 123234121 123234127 LEF1 TRANSFAC yes 42073265
chr11 123234121 123234127 TCF4 TRANSFAC yes 42073266
chr11 123234121 123234127 LEF1 TRANSFAC yes 114147727
chr11 123234121 123234127 TCF4 TRANSFAC yes 114147728
chr11 123234127 123234130 MYB TRANSFAC yes 42073267
chr11 123234127 123234130 MYB TRANSFAC yes 114147729
chr11 123234157 123234162 SP1 TRANSFAC yes 42073268
chr11 123234157 123234162 SP1 TRANSFAC yes 114147730
chr11 123234160 123234164 LFA1 TRANSFAC yes 42073269
chr11 123234160 123234164 LFA1 TRANSFAC yes 114147731
chr11 123234174 123234179 ETS2 TRANSFAC yes 42073270
chr11 123234174 123234179 ETS2 TRANSFAC yes 114147732
chr11 123234176 123234191 HNF4G JASPAR yes 42073271
chr11 123234176 123234191 HNF4G JASPAR yes 114147733
chr11 123234225 123234228 MYB TRANSFAC yes 42073272
chr11 123234225 123234228 MYB TRANSFAC yes 114147734
chr11 123234249 123234253 YY1 TRANSFAC yes 42073273
chr11 123234249 123234253 YY1 TRANSFAC yes 114147735
chr11 123234251 123234272 ZNF263 JASPAR yes 42073274
chr11 123234251 123234272 ZNF263 JASPAR yes 114147736
chr11 123234272 123234293 IRF1 JASPAR yes 42073275
chr11 123234272 123234293 IRF1 JASPAR yes 114147737
chr11 123234280 123234300 RREB1 JASPAR yes 42073276
chr11 123234280 123234300 RREB1 JASPAR yes 114147738
chr11 123234282 123234297 FOXA1 JASPAR yes 42073277
chr11 123234282 123234297 FOXA1 JASPAR yes 114147739
chr11 123234283 123234289 TCF4 TRANSFAC yes 42073278
chr11 123234283 123234289 TCF4 TRANSFAC yes 114147740
chr11 123234283 123234295 FOXI1 JASPAR yes 42073279
chr11 123234283 123234295 FOXI1 JASPAR yes 114147741
chr11 123234283 123234298 FOXP1 JASPAR yes 42073280
chr11 123234283 123234298 FOXP1 JASPAR yes 114147742
chr11 123234284 123234296 FOXC2 JASPAR yes 42073281
chr11 123234284 123234296 FOXC2 JASPAR yes 114147743
chr11 123234286 123234297 FOXA1 JASPAR yes 42073282
chr11 123234286 123234297 FOXA1 JASPAR yes 114147744
chr11 123234287 123234302 FOXP1 JASPAR yes 42073283
chr11 123234287 123234302 FOXP1 JASPAR yes 114147745
chr11 123234288 123234299 FOXP2 JASPAR yes 42073284
chr11 123234288 123234299 FOXP2 JASPAR yes 114147746
chr11 123234288 123234300 FOXC2 JASPAR yes 42073285
chr11 123234288 123234300 FOXC2 JASPAR yes 114147747
chr11 123234291 123234306 MEF2C JASPAR yes 42073286
chr11 123234291 123234306 MEF2C JASPAR yes 114147748
chr11 123234297 123234307 NFIA JASPAR yes 42073287
chr11 123234297 123234307 NFIA JASPAR yes 114147749
chr11 123234298 123234307 NFIX JASPAR yes 42073288
chr11 123234298 123234307 NFIX JASPAR yes 114147750
chr11 123234299 123234305 NFIC JASPAR yes 42073289
chr11 123234299 123234305 NFIC JASPAR yes 114147751
SNP sites on vista11908[chr11:123234100-123234303]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 123234148 rs116766198 T C no 2331539
chr11 123234210 rs17127284 T C no 2331540
chr11 123234244 rs114943444 G T no 2331541
chr11 123234245 rs565145699 C G no 2331542
chr11 123234284 rs148809072 T G
FOXA1 FOXC2 FOXI1 FOXP1 IRF1 RREB1 TCF4
2331543
chr11 123234296 rs10893029 T G
FOXA1 FOXC2 FOXP1 FOXP2 MEF2C RREB1
2331544
Genes possibly regulated by vista11908[chr11:123234100-123234303]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 123301058 123306427 + AP000783.1 ENSG00000254667.1 123301058 0.98 0.91 11558 33245
Expression level of Genes
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miRNAs possibly regulated by vista11908[chr11:123234100-123234303]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results