EnhancerDB
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  3. vista11916[chr11:123352361-123352657]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista11916[chr11:123352361-123352657]
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Tissue distribution of vista11916
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Transcription factor that possibly regulate vista11916[chr11:123352361-123352657]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 123352439 123352696 RUNX3 UCSC Txn Factor no Conserved 108004870
chr11 123352359 123352370 FOXB1 JASPAR yes 42084314
chr11 123352359 123352370 FOXC1 JASPAR yes 42084315
chr11 123352359 123352370 FOXB1 JASPAR yes 114148046
chr11 123352359 123352370 FOXC1 JASPAR yes 114148047
chr11 123352364 123352376 YY1 JASPAR yes 42084316
chr11 123352364 123352376 YY1 JASPAR yes 114148048
chr11 123352395 123352400 NFY TRANSFAC yes 42084317
chr11 123352395 123352400 NFY TRANSFAC yes 114148049
chr11 123352403 123352424 MAFG JASPAR yes 42084318
chr11 123352403 123352424 MAFG JASPAR yes 114148050
chr11 123352408 123352418 HMBOX1 JASPAR yes 42084319
chr11 123352408 123352418 HMBOX1 JASPAR yes 114148051
chr11 123352408 123352426 MAFF JASPAR yes 42084320
chr11 123352408 123352426 MAFF JASPAR yes 114148052
chr11 123352410 123352413 MYB TRANSFAC yes 42084321
chr11 123352410 123352413 MYB TRANSFAC yes 114148053
chr11 123352430 123352450 TP63 JASPAR yes 42084322
chr11 123352430 123352450 TP63 JASPAR yes 114148054
chr11 123352438 123352450 NHLH1 JASPAR yes 42084323
chr11 123352438 123352450 NHLH1 JASPAR yes 114148055
chr11 123352439 123352449 ID4 JASPAR yes 42084324
chr11 123352439 123352449 NHLH1 JASPAR yes 42084325
chr11 123352439 123352449 TCF3 JASPAR yes 42084326
chr11 123352439 123352449 TCF4 JASPAR yes 42084327
chr11 123352439 123352449 ID4 JASPAR yes 114148056
chr11 123352439 123352449 NHLH1 JASPAR yes 114148057
chr11 123352439 123352449 TCF3 JASPAR yes 114148058
chr11 123352439 123352449 TCF4 JASPAR yes 114148059
chr11 123352440 123352449 SNAI2 JASPAR yes 42084328
chr11 123352440 123352449 SNAI2 JASPAR yes 114148060
chr11 123352441 123352446 USF2 TRANSFAC yes 42084329
chr11 123352441 123352446 USF2 TRANSFAC yes 114148061
chr11 123352482 123352500 TP53 JASPAR yes 42084330
chr11 123352482 123352500 TP53 JASPAR yes 114148062
chr11 123352532 123352537 ATF1 TRANSFAC yes 42084331
chr11 123352532 123352537 ATF1 TRANSFAC yes 114148063
chr11 123352533 123352545 MYBL1 JASPAR yes 42084332
chr11 123352533 123352545 MYBL1 JASPAR yes 114148064
chr11 123352538 123352541 MYB TRANSFAC yes 42084333
chr11 123352538 123352541 MYB TRANSFAC yes 114148065
chr11 123352540 123352554 SPIC JASPAR yes 42084334
chr11 123352540 123352554 SPIC JASPAR yes 114148066
chr11 123352543 123352554 ELF5 JASPAR yes 42084335
chr11 123352543 123352554 ELF5 JASPAR yes 114148067
chr11 123352545 123352550 ETS2 TRANSFAC yes 42084336
chr11 123352545 123352550 ETS2 TRANSFAC yes 114148068
chr11 123352545 123352553 FEV JASPAR yes 42084337
chr11 123352545 123352553 FEV JASPAR yes 114148069
chr11 123352546 123352553 SPI1 JASPAR yes 42084338
chr11 123352546 123352553 SPI1 JASPAR yes 114148070
chr11 123352592 123352607 FOXP1 JASPAR yes 42084339
chr11 123352592 123352607 FOXP1 JASPAR yes 114148071
chr11 123352593 123352604 FOXP2 JASPAR yes 42084340
chr11 123352593 123352604 FOXP2 JASPAR yes 114148072
chr11 123352593 123352607 FOXF2 JASPAR yes 42084341
chr11 123352593 123352607 FOXF2 JASPAR yes 114148073
chr11 123352597 123352611 ONECUT2 JASPAR yes 42084342
chr11 123352597 123352611 ONECUT3 JASPAR yes 42084343
chr11 123352597 123352611 ONECUT2 JASPAR yes 114148074
chr11 123352597 123352611 ONECUT3 JASPAR yes 114148075
chr11 123352625 123352639 SPI1 JASPAR yes 42084344
chr11 123352625 123352639 SPI1 JASPAR yes 114148076
chr11 123352643 123352654 RUNX1 JASPAR yes 42084345
chr11 123352643 123352654 RUNX1 JASPAR yes 114148077
chr11 123352649 123352653 YY1 TRANSFAC yes 42084346
chr11 123352649 123352653 YY1 TRANSFAC yes 114148078
chr11 123352657 123352667 BHLHE22 JASPAR yes 42084347
chr11 123352657 123352667 OLIG1 JASPAR yes 42084348
chr11 123352657 123352667 BHLHE22 JASPAR yes 114148079
chr11 123352657 123352667 OLIG1 JASPAR yes 114148080
SNP sites on vista11916[chr11:123352361-123352657]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 123352374 rs11219166 G A
YY1
2332824
chr11 123352425 rs150327941 G A
MAFF
2332825
chr11 123352568 rs61374586 C T
RUNX3
2332826
chr11 123352604 rs59495779 G A
FOXF2 FOXP1 FOXP2 ONECUT2 ONECUT3 RUNX3
2332827
Genes possibly regulated by vista11916[chr11:123352361-123352657]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 123301058 123306427 + AP000783.1 ENSG00000254667.1 123301058 0.98 0.91 11558 48697
chr11 123396344 123498482 + GRAMD1B ENSG00000023171.10 123396344 0.93 0.99 11559 56313
Expression level of Genes
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miRNAs possibly regulated by vista11916[chr11:123352361-123352657]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results