EnhancerDB
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  3. vista11998[chr11:125985079-125985242]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista11998[chr11:125985079-125985242]
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Tissue distribution of vista11998
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Transcription factor that possibly regulate vista11998[chr11:125985079-125985242]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 125985103 125985114 FOXA1 JASPAR yes 42177476
chr11 125985103 125985114 FOXA1 JASPAR yes 114151576
chr11 125985107 125985113 NFIC JASPAR yes 42177477
chr11 125985107 125985113 NFIC JASPAR yes 114151577
chr11 125985120 125985134 EBF1 JASPAR yes 42177478
chr11 125985120 125985134 EBF1 JASPAR yes 114151578
chr11 125985122 125985133 EBF1 JASPAR yes 42177479
chr11 125985122 125985133 EBF1 JASPAR yes 114151579
chr11 125985126 125985131 TFAP2A TRANSFAC yes 42177480
chr11 125985126 125985131 TFAP2A TRANSFAC yes 114151580
chr11 125985126 125985132 MZF1 JASPAR yes 42177481
chr11 125985126 125985132 MZF1 JASPAR yes 114151581
chr11 125985127 125985137 GSC2 JASPAR yes 42177482
chr11 125985127 125985137 GSC JASPAR yes 42177483
chr11 125985127 125985137 GSC2 JASPAR yes 114151582
chr11 125985127 125985137 GSC JASPAR yes 114151583
chr11 125985128 125985136 OTX1 JASPAR yes 42177484
chr11 125985128 125985136 OTX2 JASPAR yes 42177485
chr11 125985128 125985136 RHOXF1 JASPAR yes 42177486
chr11 125985128 125985136 OTX1 JASPAR yes 114151584
chr11 125985128 125985136 OTX2 JASPAR yes 114151585
chr11 125985128 125985136 RHOXF1 JASPAR yes 114151586
chr11 125985128 125985137 PITX3 JASPAR yes 42177487
chr11 125985128 125985137 PITX3 JASPAR yes 114151587
chr11 125985133 125985136 MYB TRANSFAC yes 42177488
chr11 125985133 125985136 MYB TRANSFAC yes 114151588
chr11 125985141 125985149 EHF JASPAR yes 42177489
chr11 125985141 125985149 EHF JASPAR yes 114151589
chr11 125985152 125985165 ZBTB18 JASPAR yes 42177490
chr11 125985152 125985165 ZBTB18 JASPAR yes 114151590
chr11 125985188 125985201 SMAD2 JASPAR yes 42177491
chr11 125985188 125985201 SMAD2 JASPAR yes 114151591
chr11 125985188 125985202 TLX1 JASPAR yes 42177492
chr11 125985188 125985202 TLX1 JASPAR yes 114151592
chr11 125985189 125985203 TLX1 JASPAR yes 42177493
chr11 125985189 125985203 TLX1 JASPAR yes 114151593
chr11 125985190 125985203 SMAD2 JASPAR yes 42177494
chr11 125985190 125985203 SMAD2 JASPAR yes 114151594
SNP sites on vista11998[chr11:125985079-125985242]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 125985148 rs565270118 T C
EHF
2343819
Genes possibly regulated by vista11998[chr11:125985079-125985242]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 125825691 125933230 - CDON ENSG00000064309.10 125933230 0.82 1.0 11615 48151
chr11 126071993 126081587 - RPUSD4 ENSG00000165526.4 126081587 0.55 1.0 11616 3655
chr11 126081309 126132881 + FAM118B ENSG00000197798.4 126081309 0.56 1.0 11617 3933
Expression level of Genes
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miRNAs possibly regulated by vista11998[chr11:125985079-125985242]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results