EnhancerDB
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  3. vista1200[chr1:36853020-36853462]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1200[chr1:36853020-36853462]
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Tissue distribution of vista1200
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Transcription factor that possibly regulate vista1200[chr1:36853020-36853462]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 36852742 36853053 CEBPB UCSC Txn Factor no Conserved 107802842
chr1 36853028 36853033 SP1 TRANSFAC yes 118272269
chr1 36853107 36853117 ELK1 JASPAR yes 118272270
chr1 36853107 36853119 ELF1 JASPAR yes 118272271
chr1 36853107 36853119 ELF4 JASPAR yes 118272272
chr1 36853109 36853118 ELK4 JASPAR yes 118272273
chr1 36853109 36853119 ELK1 JASPAR yes 118272274
chr1 36853109 36853119 ERG JASPAR yes 118272275
chr1 36853109 36853119 ETV5 JASPAR yes 118272276
chr1 36853109 36853119 FEV JASPAR yes 118272277
chr1 36853109 36853119 FLI1 JASPAR yes 118272278
chr1 36853109 36853120 ELK4 JASPAR yes 118272279
chr1 36853111 36853117 ETS1 JASPAR yes 118272280
chr1 36853111 36853117 SPI1 JASPAR yes 118272281
chr1 36853119 36853126 JUN TRANSFAC yes 118272282
chr1 36853142 36853152 RELA JASPAR yes 118272283
chr1 36853142 36853152 REL JASPAR yes 118272284
chr1 36853142 36853153 NFKB1 JASPAR yes 118272285
chr1 36853146 36853153 NFATC2 JASPAR yes 118272286
chr1 36853157 36853167 ALX3 JASPAR yes 118272287
chr1 36853157 36853167 EMX2 JASPAR yes 118272288
chr1 36853157 36853167 ESX1 JASPAR yes 118272289
chr1 36853157 36853167 EVX1 JASPAR yes 118272290
chr1 36853157 36853167 EVX2 JASPAR yes 118272291
chr1 36853157 36853167 HESX1 JASPAR yes 118272292
chr1 36853157 36853167 HOXB2 JASPAR yes 118272293
chr1 36853157 36853167 LHX2 JASPAR yes 118272294
chr1 36853157 36853167 MEOX1 JASPAR yes 118272295
chr1 36853157 36853167 MEOX2 JASPAR yes 118272296
chr1 36853157 36853167 MNX1 JASPAR yes 118272297
chr1 36853158 36853166 LBX1 JASPAR yes 118272298
chr1 36853158 36853166 PDX1 JASPAR yes 118272299
chr1 36853158 36853166 VAX1 JASPAR yes 118272300
chr1 36853158 36853166 VAX2 JASPAR yes 118272301
chr1 36853158 36853166 VSX1 JASPAR yes 118272302
chr1 36853158 36853166 VSX2 JASPAR yes 118272303
chr1 36853170 36853181 BATF JASPAR yes 118272304
chr1 36853172 36853183 FOS JASPAR yes 118272305
chr1 36853172 36853183 JUND JASPAR yes 118272306
chr1 36853172 36853183 NFE2 JASPAR yes 118272307
chr1 36853173 36853184 FOSL2 JASPAR yes 118272308
chr1 36853173 36853184 JUNB JASPAR yes 118272309
chr1 36853173 36853187 JUN JASPAR yes 118272310
chr1 36853174 36853180 JUN TRANSFAC yes 118272311
chr1 36853190 36853205 SOX21 JASPAR yes 118272312
chr1 36853205 36853219 EBF1 JASPAR yes 118272313
chr1 36853207 36853218 EBF1 JASPAR yes 118272314
chr1 36853218 36853230 NHLH1 JASPAR yes 118272315
chr1 36853219 36853229 TFAP4 JASPAR yes 118272316
chr1 36853227 36853232 MYB TRANSFAC yes 118272317
chr1 36853245 36853248 MYB TRANSFAC yes 118272318
chr1 36853247 36853253 SOX10 JASPAR yes 118272319
chr1 36853249 36853270 ZNF263 JASPAR yes 118272320
chr1 36853254 36853275 ZNF263 JASPAR yes 118272321
chr1 36853258 36853279 IRF1 JASPAR yes 118272322
chr1 36853260 36853266 PEA3 TRANSFAC yes 118272323
chr1 36853260 36853281 ZNF263 JASPAR yes 118272324
chr1 36853262 36853276 STAT1 JASPAR yes 118272325
chr1 36853262 36853277 AR JASPAR yes 118272326
chr1 36853262 36853277 STAT2 JASPAR yes 118272327
chr1 36853292 36853307 STAT2 JASPAR yes 118272328
chr1 36853307 36853320 SMAD2 JASPAR yes 118272329
chr1 36853318 36853325 SPIB JASPAR yes 118272330
chr1 36853318 36853328 ETV6 JASPAR yes 118272331
chr1 36853318 36853329 FLI1 JASPAR yes 118272332
chr1 36853318 36853339 IRF1 JASPAR yes 118272333
chr1 36853319 36853327 FEV JASPAR yes 118272334
chr1 36853322 36853336 STAT1 JASPAR yes 118272335
chr1 36853333 36853337 NFE TRANSFAC yes 118272336
chr1 36853370 36853390 RREB1 JASPAR yes 118272337
chr1 36853372 36853392 RREB1 JASPAR yes 118272338
chr1 36853374 36853394 RREB1 JASPAR yes 118272339
chr1 36853376 36853396 RREB1 JASPAR yes 118272340
chr1 36853378 36853398 RREB1 JASPAR yes 118272341
chr1 36853380 36853400 RREB1 JASPAR yes 118272342
SNP sites on vista1200[chr1:36853020-36853462]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 36853112 rs150935334 C T
ELF1 ELF4 ELK1 ELK4 ERG ETS1 ETV5 FEV FLI1 SPI1
233476
chr1 36853282 rs533102508 GAGA G no 233477
chr1 36853330 rs56873931 G A
IRF1 STAT1
233478
chr1 36853369 rs10563418 GACAC G no 233479
chr1 36853369 rs397860463 GAC G no 233480
chr1 36853369 rs56251505 GACAC G no 233481
chr1 36853369 rs566561779 GAC G no 233482
chr1 36853369 rs5773522 GAC G no 233483
chr1 36853401 rs562760379 C T no 233484
chr1 36853444 rs577279016 C G,T no 233485
Genes possibly regulated by vista1200[chr1:36853020-36853462]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 36771988 36790484 + SH3D21 ENSG00000214193.5 36771988 0.91 1.0 510 18968
chr1 36787632 36789755 - EVA1B ENSG00000142694.6 36789755 0.7 1.0 511 36735
chr1 36789335 36794822 + RP11-268J15.5 ENSG00000116883.8 36789335 0.9 1.0 512 36315
chr1 36805225 36851497 - STK40 ENSG00000196182.6 36851497 0.61 1.0 513 98477
chr1 36856839 36863493 - LSM10 ENSG00000181817.5 36863493 0.63 1.0 514 89969
chr1 36881428 36916086 - OSCP1 ENSG00000116885.14 36916086 0.79 1.0 515 37376
chr1 36921319 36930038 - MRPS15 ENSG00000116898.7 36930038 0.76 0.99 516 23424
chr1 36931644 36948879 - CSF3R ENSG00000119535.13 36948879 0.95 0.99 517 4583
Expression level of Genes
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miRNAs possibly regulated by vista1200[chr1:36853020-36853462]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results