EnhancerDB
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  3. vista12001[chr11:125997963-125998111]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista12001[chr11:125997963-125998111]
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Tissue distribution of vista12001
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Transcription factor that possibly regulate vista12001[chr11:125997963-125998111]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 125997952 125997967 HNF4A JASPAR yes 42179143
chr11 125997952 125997967 HNF4A JASPAR yes 114151690
chr11 125997989 125997993 NFE TRANSFAC yes 42179144
chr11 125997989 125997993 NFE TRANSFAC yes 114151691
chr11 125997992 125998013 ZNF263 JASPAR yes 42179145
chr11 125997992 125998013 ZNF263 JASPAR yes 114151692
chr11 125998005 125998009 NFE TRANSFAC yes 42179146
chr11 125998005 125998009 NFE TRANSFAC yes 114151693
chr11 125998006 125998020 EBF1 JASPAR yes 42179147
chr11 125998006 125998020 EBF1 JASPAR yes 114151694
chr11 125998008 125998019 EBF1 JASPAR yes 42179148
chr11 125998008 125998019 EBF1 JASPAR yes 114151695
chr11 125998023 125998033 NFIA JASPAR yes 42179149
chr11 125998023 125998033 NFIA JASPAR yes 114151696
chr11 125998024 125998033 NFIX JASPAR yes 42179150
chr11 125998024 125998033 NFIX JASPAR yes 114151697
chr11 125998025 125998031 NFIC JASPAR yes 42179151
chr11 125998025 125998031 NFIC JASPAR yes 114151698
chr11 125998025 125998039 TLX1 JASPAR yes 42179152
chr11 125998025 125998039 TLX1 JASPAR yes 114151699
chr11 125998046 125998059 POU2F2 JASPAR yes 42179153
chr11 125998046 125998059 POU2F2 JASPAR yes 114151700
chr11 125998077 125998082 SP1 TRANSFAC yes 42179154
chr11 125998077 125998082 SP1 TRANSFAC yes 114151701
chr11 125998096 125998102 GATA3 JASPAR yes 42179155
chr11 125998096 125998102 GATA3 JASPAR yes 114151702
chr11 125998100 125998107 SPIB JASPAR yes 42179156
chr11 125998100 125998107 SPIB JASPAR yes 114151703
SNP sites on vista12001[chr11:125997963-125998111]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 125998029 rs74734297 G A
NFIA NFIC NFIX TLX1
2344011
chr11 125998095 rs637287 A T no 2344012
chr11 125998110 rs554308821 T A no 2344013
Genes possibly regulated by vista12001[chr11:125997963-125998111]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 125825691 125933230 - CDON ENSG00000064309.10 125933230 0.82 1.0 11615 35267
chr11 126071993 126081587 - RPUSD4 ENSG00000165526.4 126081587 0.55 1.0 11616 16524
chr11 126081309 126132881 + FAM118B ENSG00000197798.4 126081309 0.56 1.0 11617 16802
Expression level of Genes
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miRNAs possibly regulated by vista12001[chr11:125997963-125998111]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results