EnhancerDB
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  3. vista12005[chr11:126029421-126029682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista12005[chr11:126029421-126029682]
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Tissue distribution of vista12005
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Transcription factor that possibly regulate vista12005[chr11:126029421-126029682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 126029453 126029464 NFKB1 JASPAR yes 42183319
chr11 126029453 126029464 NFKB1 JASPAR yes 114151814
chr11 126029455 126029470 PRDM1 JASPAR yes 42183320
chr11 126029455 126029470 PRDM1 JASPAR yes 114151815
chr11 126029468 126029471 MYB TRANSFAC yes 42183321
chr11 126029468 126029471 MYB TRANSFAC yes 114151816
chr11 126029473 126029479 GATA3 JASPAR yes 42183322
chr11 126029473 126029479 GATA3 JASPAR yes 114151817
chr11 126029479 126029485 HiNF-A TRANSFAC yes 42183323
chr11 126029479 126029485 HiNF-A TRANSFAC yes 114151818
chr11 126029489 126029501 YY1 JASPAR yes 42183324
chr11 126029489 126029501 YY1 JASPAR yes 114151819
chr11 126029497 126029517 TP53 JASPAR yes 42183325
chr11 126029497 126029517 TP53 JASPAR yes 114151820
chr11 126029524 126029527 MYB TRANSFAC yes 42183326
chr11 126029524 126029527 MYB TRANSFAC yes 114151821
chr11 126029549 126029562 ELF1 JASPAR yes 42183327
chr11 126029549 126029562 ELF1 JASPAR yes 114151822
chr11 126029553 126029564 E2F6 JASPAR yes 42183328
chr11 126029553 126029564 E2F6 JASPAR yes 114151823
chr11 126029557 126029567 ZNF740 JASPAR yes 42183329
chr11 126029557 126029567 ZNF740 JASPAR yes 114151824
chr11 126029560 126029566 MZF1 JASPAR yes 42183330
chr11 126029560 126029566 MZF1 JASPAR yes 114151825
chr11 126029574 126029585 STAT3 JASPAR yes 42183331
chr11 126029574 126029585 STAT3 JASPAR yes 114151826
chr11 126029579 126029593 IRF8 JASPAR yes 42183332
chr11 126029579 126029593 IRF8 JASPAR yes 114151827
chr11 126029580 126029594 STAT1 JASPAR yes 42183333
chr11 126029580 126029594 STAT1 JASPAR yes 114151828
chr11 126029580 126029595 STAT2 JASPAR yes 42183334
chr11 126029580 126029595 STAT2 JASPAR yes 114151829
chr11 126029636 126029653 RARA JASPAR yes 42183335
chr11 126029636 126029653 RXRA JASPAR yes 42183336
chr11 126029636 126029653 RARA JASPAR yes 114151830
chr11 126029636 126029653 RXRA JASPAR yes 114151831
chr11 126029646 126029654 NR4A2 JASPAR yes 42183337
chr11 126029646 126029654 NR4A2 JASPAR yes 114151832
chr11 126029670 126029685 RFX5 JASPAR yes 42183338
chr11 126029670 126029685 RFX5 JASPAR yes 114151833
chr11 126029678 126029693 ZIC3 JASPAR yes 42183339
chr11 126029678 126029693 ZIC4 JASPAR yes 42183340
chr11 126029678 126029693 ZIC3 JASPAR yes 114151834
chr11 126029678 126029693 ZIC4 JASPAR yes 114151835
chr11 126029679 126029693 ZIC1 JASPAR yes 42183341
chr11 126029679 126029693 ZIC1 JASPAR yes 114151836
SNP sites on vista12005[chr11:126029421-126029682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 126029612 rs11220382 T C no 2344460
chr11 126029655 rs482487 C G no 2344461
chr11 126029659 rs182361791 T C no 2344462
Genes possibly regulated by vista12005[chr11:126029421-126029682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 125825691 125933230 - CDON ENSG00000064309.10 125933230 0.82 1.0 11615 3809
chr11 126071993 126081587 - RPUSD4 ENSG00000165526.4 126081587 0.55 1.0 11616 48095
chr11 126081309 126132881 + FAM118B ENSG00000197798.4 126081309 0.56 1.0 11617 48373
Expression level of Genes
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miRNAs possibly regulated by vista12005[chr11:126029421-126029682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results