EnhancerDB
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  3. vista1216[chr1:37937293-37937526]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1216[chr1:37937293-37937526]
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Tissue distribution of vista1216
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Transcription factor that possibly regulate vista1216[chr1:37937293-37937526]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 37937316 37937321 TFAP2A TRANSFAC yes 118273090
chr1 37937316 37937322 MZF1 JASPAR yes 118273091
chr1 37937317 37937327 GSC2 JASPAR yes 118273092
chr1 37937317 37937327 GSC JASPAR yes 118273093
chr1 37937318 37937326 OTX1 JASPAR yes 118273094
chr1 37937318 37937327 PITX3 JASPAR yes 118273095
chr1 37937323 37937338 HNF4G JASPAR yes 118273096
chr1 37937324 37937338 RXRB JASPAR yes 118273097
chr1 37937324 37937338 RXRG JASPAR yes 118273098
chr1 37937341 37937354 ZBTB18 JASPAR yes 118273099
chr1 37937355 37937369 ZIC1 JASPAR yes 118273100
chr1 37937360 37937373 NFKB1 JASPAR yes 118273101
chr1 37937361 37937372 NFKB1 JASPAR yes 118273102
chr1 37937367 37937373 MZF1 JASPAR yes 118273103
chr1 37937411 37937416 ETS2 TRANSFAC yes 118273104
chr1 37937423 37937433 ELK1 JASPAR yes 118273105
chr1 37937423 37937436 ELF3 JASPAR yes 118273106
chr1 37937425 37937435 GABPA JASPAR yes 118273107
chr1 37937425 37937436 ELK4 JASPAR yes 118273108
chr1 37937427 37937433 ETS1 JASPAR yes 118273109
chr1 37937427 37937433 SPI1 JASPAR yes 118273110
chr1 37937456 37937462 MAZ TRANSFAC yes 118273111
chr1 37937457 37937472 NR2C2 JASPAR yes 118273112
chr1 37937460 37937464 LFA1 TRANSFAC yes 118273113
chr1 37937465 37937483 ESR2 JASPAR yes 118273114
chr1 37937469 37937483 JUN JASPAR yes 118273115
chr1 37937471 37937482 BATF JASPAR yes 118273116
chr1 37937472 37937483 FOSL2 JASPAR yes 118273117
chr1 37937472 37937483 JUNB JASPAR yes 118273118
chr1 37937473 37937484 FOS JASPAR yes 118273119
chr1 37937473 37937484 FOSL1 JASPAR yes 118273120
chr1 37937473 37937484 JUND JASPAR yes 118273121
chr1 37937473 37937484 NFE2 JASPAR yes 118273122
chr1 37937474 37937483 JDP2 JASPAR yes 118273123
chr1 37937474 37937485 FOSL2 JASPAR yes 118273124
chr1 37937474 37937485 JUNB JASPAR yes 118273125
chr1 37937474 37937488 JUN JASPAR yes 118273126
chr1 37937475 37937486 BATF JASPAR yes 118273127
chr1 37937493 37937512 CTCF JASPAR yes 118273128
chr1 37937518 37937522 LFA1 TRANSFAC yes 118273129
SNP sites on vista1216[chr1:37937293-37937526]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 37937356 rs530955533 C T
ZIC1
238419
chr1 37937381 rs75778090 C T no 238420
chr1 37937517 rs546599772 C T no 238421
Genes possibly regulated by vista1216[chr1:37937293-37937526]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 37940153 37949980 + ZC3H12A ENSG00000163874.8 37940153 0.83 1.0 519 97373
chr1 37958176 37980375 - MEAF6 ENSG00000163875.11 37980375 0.63 0.98 520 57151
chr1 38000050 38019903 - SNIP1 ENSG00000163877.9 38019903 0.54 0.99 521 17623
chr1 38022520 38032458 + DNALI1 ENSG00000163879.9 38022520 0.9 0.99 522 15006
Expression level of Genes
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miRNAs possibly regulated by vista1216[chr1:37937293-37937526]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 37945868 37945890 + hsa-miR-6732-3p MIMAT0027366 37940180 0.025157232704402517 0.0 0.0 34
Expression level of miRNAs
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