EnhancerDB
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  3. vista12162[chr11:130016455-130016576]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista12162[chr11:130016455-130016576]
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Tissue distribution of vista12162
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Transcription factor that possibly regulate vista12162[chr11:130016455-130016576]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 130016150 130016583 CTCF UCSC Txn Factor no Conserved 108008044
chr11 130016374 130016625 SIN3A UCSC Txn Factor no Conserved 108008082
chr11 130016448 130016466 ESR1 JASPAR yes 42418020
chr11 130016448 130016466 ESR1 JASPAR yes 114158653
chr11 130016452 130016462 SP1 JASPAR yes 42418021
chr11 130016452 130016462 SP1 JASPAR yes 114158654
chr11 130016473 130016485 NHLH1 JASPAR yes 42418022
chr11 130016473 130016485 NHLH1 JASPAR yes 114158655
chr11 130016478 130016489 GCM1 JASPAR yes 42418023
chr11 130016478 130016489 GCM1 JASPAR yes 114158656
chr11 130016489 130016501 PKNOX1 JASPAR yes 42418024
chr11 130016489 130016501 PKNOX2 JASPAR yes 42418025
chr11 130016489 130016501 TGIF1 JASPAR yes 42418026
chr11 130016489 130016501 TGIF2 JASPAR yes 42418027
chr11 130016489 130016501 PKNOX1 JASPAR yes 114158657
chr11 130016489 130016501 PKNOX2 JASPAR yes 114158658
chr11 130016489 130016501 TGIF1 JASPAR yes 114158659
chr11 130016489 130016501 TGIF2 JASPAR yes 114158660
chr11 130016490 130016499 SNAI2 JASPAR yes 42418028
chr11 130016490 130016499 SNAI2 JASPAR yes 114158661
chr11 130016490 130016500 ID4 JASPAR yes 42418029
chr11 130016490 130016500 TCF3 JASPAR yes 42418030
chr11 130016490 130016500 TCF4 JASPAR yes 42418031
chr11 130016490 130016500 ID4 JASPAR yes 114158662
chr11 130016490 130016500 TCF3 JASPAR yes 114158663
chr11 130016490 130016500 TCF4 JASPAR yes 114158664
chr11 130016492 130016501 ZEB1 JASPAR yes 42418032
chr11 130016492 130016501 ZEB1 JASPAR yes 114158665
chr11 130016492 130016502 TBX21 JASPAR yes 42418033
chr11 130016492 130016502 TBX21 JASPAR yes 114158666
chr11 130016493 130016501 TBX15 JASPAR yes 42418034
chr11 130016493 130016501 TBX4 JASPAR yes 42418035
chr11 130016493 130016501 TBX15 JASPAR yes 114158667
chr11 130016493 130016501 TBX4 JASPAR yes 114158668
chr11 130016493 130016503 TBR1 JASPAR yes 42418036
chr11 130016493 130016503 TBR1 JASPAR yes 114158669
chr11 130016502 130016506 H4TF2 TRANSFAC yes 42418037
chr11 130016502 130016506 H4TF2 TRANSFAC yes 114158670
chr11 130016513 130016526 SMAD2 JASPAR yes 42418038
chr11 130016513 130016526 SMAD2 JASPAR yes 114158671
chr11 130016517 130016521 NFE TRANSFAC yes 42418039
chr11 130016517 130016521 NFE TRANSFAC yes 114158672
chr11 130016523 130016537 IRF8 JASPAR yes 42418040
chr11 130016523 130016537 IRF8 JASPAR yes 114158673
chr11 130016523 130016538 IRF9 JASPAR yes 42418041
chr11 130016523 130016538 IRF9 JASPAR yes 114158674
chr11 130016528 130016533 MYC TRANSFAC yes 42418042
chr11 130016528 130016533 MYC TRANSFAC yes 114158675
chr11 130016546 130016558 NHLH1 JASPAR yes 42418043
chr11 130016546 130016558 NHLH1 JASPAR yes 114158676
chr11 130016547 130016557 NHLH1 JASPAR yes 42418044
chr11 130016547 130016557 NHLH1 JASPAR yes 114158677
SNP sites on vista12162[chr11:130016455-130016576]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 130016499 rs75929649 C T
CTCF ID4 PKNOX1 PKNOX2 SIN3A SNAI2 TBR1 TBX15 TBX21 TBX4 TCF3 TCF4 TGIF1 TGIF2 ZEB1
2369025
Genes possibly regulated by vista12162[chr11:130016455-130016576]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 129936836 129944012 + AP003041.2 ENSG00000267981.1 129936836 0.97 1.0 11636 20381
chr11 129939732 130014699 + APLP2 ENSG00000084234.12 129939732 0.72 1.0 11637 23277
chr11 130029457 130080271 + ST14 ENSG00000149418.6 130029457 0.77 1.0 11638 87119
Expression level of Genes
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miRNAs possibly regulated by vista12162[chr11:130016455-130016576]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results