EnhancerDB
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  3. vista1219[chr1:38009784-38010404]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1219[chr1:38009784-38010404]
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Tissue distribution of vista1219
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Transcription factor that possibly regulate vista1219[chr1:38009784-38010404]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38009815 38009820 SP1 TRANSFAC yes 118273350
chr1 38009819 38009836 RARA JASPAR yes 118273351
chr1 38009819 38009836 RXRA JASPAR yes 118273352
chr1 38009820 38009826 ZNF354C JASPAR yes 118273353
chr1 38009826 38009836 RORA JASPAR yes 118273354
chr1 38009827 38009838 ESRRA JASPAR yes 118273355
chr1 38009827 38009838 ESRRB JASPAR yes 118273356
chr1 38009827 38009840 NR2F1 JASPAR yes 118273357
chr1 38009829 38009837 NR4A2 JASPAR yes 118273358
chr1 38009829 38009847 RARA JASPAR yes 118273359
chr1 38009831 38009835 ESR1 TRANSFAC yes 118273360
chr1 38009857 38009869 YY1 JASPAR yes 118273361
chr1 38009860 38009871 CEBPA JASPAR yes 118273362
chr1 38009860 38009872 HLF JASPAR yes 118273363
chr1 38009861 38009872 CEBPB JASPAR yes 118273364
chr1 38009872 38009876 NFE TRANSFAC yes 118273365
chr1 38009878 38009893 MEF2C JASPAR yes 118273366
chr1 38009879 38009894 MEF2A JASPAR yes 118273367
chr1 38009880 38009892 MEF2A JASPAR yes 118273368
chr1 38009880 38009892 MEF2B JASPAR yes 118273369
chr1 38009880 38009892 MEF2D JASPAR yes 118273370
chr1 38009971 38009986 NR2C2 JASPAR yes 118273371
chr1 38009973 38009979 SP1 TRANSFAC yes 118273372
chr1 38009974 38009979 SP1 TRANSFAC yes 118273373
chr1 38009979 38009996 ESR1 JASPAR yes 118273374
chr1 38009998 38010008 SREBF1 JASPAR yes 118273375
chr1 38009998 38010008 SREBF2 JASPAR yes 118273376
chr1 38010040 38010044 NFE TRANSFAC yes 118273377
chr1 38010044 38010059 FOXP1 JASPAR yes 118273378
chr1 38010045 38010060 FOXP1 JASPAR yes 118273379
chr1 38010046 38010061 FOXP1 JASPAR yes 118273380
chr1 38010046 38010067 IRF1 JASPAR yes 118273381
chr1 38010047 38010062 FOXP1 JASPAR yes 118273382
chr1 38010047 38010068 IRF1 JASPAR yes 118273383
chr1 38010048 38010063 FOXP1 JASPAR yes 118273384
chr1 38010048 38010069 IRF1 JASPAR yes 118273385
chr1 38010049 38010064 FOXP1 JASPAR yes 118273386
chr1 38010049 38010070 IRF1 JASPAR yes 118273387
chr1 38010050 38010065 FOXP1 JASPAR yes 118273388
chr1 38010050 38010071 IRF1 JASPAR yes 118273389
chr1 38010051 38010066 FOXP1 JASPAR yes 118273390
chr1 38010051 38010072 IRF1 JASPAR yes 118273391
chr1 38010052 38010067 FOXP1 JASPAR yes 118273392
chr1 38010054 38010069 FOXP1 JASPAR yes 118273393
chr1 38010055 38010076 IRF1 JASPAR yes 118273394
chr1 38010056 38010071 FOXP1 JASPAR yes 118273395
chr1 38010059 38010073 SPIC JASPAR yes 118273396
chr1 38010059 38010073 STAT1 JASPAR yes 118273397
chr1 38010059 38010074 PRDM1 JASPAR yes 118273398
chr1 38010059 38010074 STAT2 JASPAR yes 118273399
chr1 38010059 38010080 IRF1 JASPAR yes 118273400
chr1 38010063 38010084 IRF1 JASPAR yes 118273401
chr1 38010095 38010109 EBF1 JASPAR yes 118273402
chr1 38010097 38010103 MZF1 JASPAR yes 118273403
chr1 38010121 38010136 SOX21 JASPAR yes 118273404
chr1 38010132 38010143 FOXH1 JASPAR yes 118273405
chr1 38010148 38010163 FOXP1 JASPAR yes 118273406
chr1 38010175 38010181 ETS1 JASPAR yes 118273407
chr1 38010175 38010186 NFKB1 JASPAR yes 118273408
chr1 38010176 38010186 NFKB1 JASPAR yes 118273409
chr1 38010176 38010186 RELA JASPAR yes 118273410
chr1 38010176 38010186 REL JASPAR yes 118273411
chr1 38010186 38010196 RELA JASPAR yes 118273412
chr1 38010186 38010196 REL JASPAR yes 118273413
chr1 38010186 38010197 NFKB1 JASPAR yes 118273414
chr1 38010189 38010202 ELF1 JASPAR yes 118273415
chr1 38010248 38010253 SP1 TRANSFAC yes 118273416
chr1 38010293 38010297 NFE TRANSFAC yes 118273417
chr1 38010305 38010311 SP1 TRANSFAC yes 118273418
chr1 38010305 38010315 SP1 JASPAR yes 118273419
chr1 38010347 38010352 MYC TRANSFAC yes 118273420
chr1 38010354 38010366 ZBTB7C JASPAR yes 118273421
chr1 38010357 38010376 RFX2 JASPAR yes 118273422
chr1 38010376 38010386 MZF1 JASPAR yes 118273423
chr1 38010383 38010395 NHLH1 JASPAR yes 118273424
chr1 38010384 38010393 SNAI2 JASPAR yes 118273425
chr1 38010384 38010394 ID4 JASPAR yes 118273426
chr1 38010384 38010394 NHLH1 JASPAR yes 118273427
chr1 38010384 38010394 TCF3 JASPAR yes 118273428
chr1 38010384 38010394 TCF4 JASPAR yes 118273429
chr1 38010386 38010395 ZEB1 JASPAR yes 118273430
SNP sites on vista1219[chr1:38009784-38010404]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38009910 rs111676857 G T no 238792
chr1 38009939 rs186015123 T C no 238793
chr1 38009978 rs559130334 C T
NR2C2 SP1
238794
chr1 38009998 rs191209476 G A
SREBF1 SREBF2
238795
chr1 38010150 rs574932401 A G
FOXP1
238796
chr1 38010158 rs185983112 A G
FOXP1
238797
chr1 38010224 rs190836634 G A no 238798
chr1 38010243 rs72657787 G A no 238799
chr1 38010269 rs575395607 G C no 238800
chr1 38010303 rs552625660 G A no 238801
chr1 38010358 rs146164816 A G
RFX2 ZBTB7C
238802
chr1 38010375 rs556870244 G A
RFX2
238803
chr1 38010380 rs114613523 C T
MZF1
238804
chr1 38010392 rs576150550 G GC
ID4 NHLH1 SNAI2 TCF3 TCF4 ZEB1
238805
Genes possibly regulated by vista1219[chr1:38009784-38010404]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 37940153 37949980 + ZC3H12A ENSG00000163874.8 37940153 0.83 1.0 519 30369
chr1 37958176 37980375 - MEAF6 ENSG00000163875.11 37980375 0.63 0.98 520 70591
chr1 38000050 38019903 - SNIP1 ENSG00000163877.9 38019903 0.54 0.99 521 90501
chr1 38022520 38032458 + DNALI1 ENSG00000163879.9 38022520 0.9 0.99 522 87884
chr1 38032417 38061536 - GNL2 ENSG00000134697.8 38061536 0.78 0.99 523 48868
chr1 38076951 38100595 - RSPO1 ENSG00000169218.9 38100595 0.99 1.0 524 9809
Expression level of Genes
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miRNAs possibly regulated by vista1219[chr1:38009784-38010404]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results