EnhancerDB
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  3. vista1228[chr1:38312444-38312820]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1228[chr1:38312444-38312820]
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Tissue distribution of vista1228
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Transcription factor that possibly regulate vista1228[chr1:38312444-38312820]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38312284 38312670 IRF1 UCSC Txn Factor no Conserved 107802866
chr1 38312434 38312449 SCRT1 JASPAR yes 28183754
chr1 38312434 38312449 SCRT1 JASPAR yes 118273768
chr1 38312435 38312445 FIGLA JASPAR yes 28183755
chr1 38312435 38312445 ID4 JASPAR yes 28183756
chr1 38312435 38312445 MSC JASPAR yes 28183757
chr1 38312435 38312445 TCF3 JASPAR yes 28183758
chr1 38312435 38312445 TCF4 JASPAR yes 28183759
chr1 38312435 38312445 FIGLA JASPAR yes 118273769
chr1 38312435 38312445 ID4 JASPAR yes 118273770
chr1 38312435 38312445 MSC JASPAR yes 118273771
chr1 38312435 38312445 TCF3 JASPAR yes 118273772
chr1 38312435 38312445 TCF4 JASPAR yes 118273773
chr1 38312436 38312445 SNAI2 JASPAR yes 28183760
chr1 38312436 38312445 SNAI2 JASPAR yes 118273774
chr1 38312436 38312449 SCRT2 JASPAR yes 28183761
chr1 38312436 38312449 SCRT2 JASPAR yes 118273775
chr1 38312444 38312465 IRF1 JASPAR yes 28183763
chr1 38312444 38312465 IRF1 JASPAR yes 118273776
chr1 38312448 38312463 FOXP1 JASPAR yes 28183764
chr1 38312448 38312463 FOXP1 JASPAR yes 118273777
chr1 38312449 38312470 IRF1 JASPAR yes 28183765
chr1 38312449 38312470 IRF1 JASPAR yes 118273778
chr1 38312450 38312465 FOXP1 JASPAR yes 28183766
chr1 38312450 38312465 LEF1 JASPAR yes 28183767
chr1 38312450 38312465 FOXP1 JASPAR yes 118273779
chr1 38312450 38312465 LEF1 JASPAR yes 118273780
chr1 38312470 38312481 NFKB1 JASPAR yes 28183768
chr1 38312470 38312481 NFKB1 JASPAR yes 118273781
chr1 38312471 38312481 REL JASPAR yes 28183769
chr1 38312471 38312481 REL JASPAR yes 118273782
chr1 38312476 38312487 STAT1 JASPAR yes 28183770
chr1 38312476 38312487 STAT1 JASPAR yes 118273783
chr1 38312480 38312501 IRF1 JASPAR yes 28183771
chr1 38312480 38312501 IRF1 JASPAR yes 118273784
chr1 38312482 38312488 PEA3 TRANSFAC yes 28183772
chr1 38312482 38312488 PEA3 TRANSFAC yes 118273785
chr1 38312482 38312503 ZNF263 JASPAR yes 28183773
chr1 38312482 38312503 ZNF263 JASPAR yes 118273786
chr1 38312484 38312498 STAT1 JASPAR yes 28183774
chr1 38312484 38312498 STAT1 JASPAR yes 118273787
chr1 38312484 38312499 PRDM1 JASPAR yes 28183775
chr1 38312484 38312499 STAT2 JASPAR yes 28183776
chr1 38312484 38312499 PRDM1 JASPAR yes 118273788
chr1 38312484 38312499 STAT2 JASPAR yes 118273789
chr1 38312486 38312507 IRF1 JASPAR yes 28183777
chr1 38312486 38312507 IRF1 JASPAR yes 118273790
chr1 38312488 38312503 IRF9 JASPAR yes 28183778
chr1 38312488 38312503 IRF9 JASPAR yes 118273791
chr1 38312489 38312503 IRF7 JASPAR yes 28183779
chr1 38312489 38312503 IRF8 JASPAR yes 28183780
chr1 38312489 38312503 IRF7 JASPAR yes 118273792
chr1 38312489 38312503 IRF8 JASPAR yes 118273793
chr1 38312490 38312504 STAT1 JASPAR yes 28183781
chr1 38312490 38312504 STAT1 JASPAR yes 118273794
chr1 38312490 38312505 PRDM1 JASPAR yes 28183782
chr1 38312490 38312505 STAT2 JASPAR yes 28183783
chr1 38312490 38312505 PRDM1 JASPAR yes 118273795
chr1 38312490 38312505 STAT2 JASPAR yes 118273796
chr1 38312490 38312508 IRF2 JASPAR yes 28183784
chr1 38312490 38312508 IRF2 JASPAR yes 118273797
chr1 38312491 38312503 IRF1 JASPAR yes 28183785
chr1 38312491 38312503 IRF1 JASPAR yes 118273798
chr1 38312492 38312513 IRF1 JASPAR yes 28183786
chr1 38312492 38312513 IRF1 JASPAR yes 118273799
chr1 38312498 38312508 TBX21 JASPAR yes 28183787
chr1 38312498 38312508 TBX21 JASPAR yes 118273800
chr1 38312522 38312526 YY1 TRANSFAC yes 28183788
chr1 38312522 38312526 YY1 TRANSFAC yes 118273801
chr1 38312562 38312566 LFA1 TRANSFAC yes 28183789
chr1 38312562 38312566 LFA1 TRANSFAC yes 118273802
chr1 38312582 38312596 FOXF2 JASPAR yes 28183790
chr1 38312582 38312596 FOXF2 JASPAR yes 118273803
chr1 38312583 38312594 HOXC13 JASPAR yes 28183791
chr1 38312583 38312594 HOXC13 JASPAR yes 118273804
chr1 38312584 38312594 HOXC10 JASPAR yes 28183792
chr1 38312584 38312594 HOXC10 JASPAR yes 118273805
chr1 38312584 38312600 POU4F3 JASPAR yes 28183793
chr1 38312584 38312600 POU4F3 JASPAR yes 118273806
chr1 38312586 38312601 HNF1A JASPAR yes 28183794
chr1 38312586 38312601 HNF1A JASPAR yes 118273807
chr1 38312606 38312622 RFX3 JASPAR yes 28183795
chr1 38312606 38312622 RFX3 JASPAR yes 118273808
chr1 38312636 38312646 MZF1 JASPAR yes 28183796
chr1 38312636 38312646 MZF1 JASPAR yes 118273809
chr1 38312637 38312643 MZF1 JASPAR yes 28183797
chr1 38312637 38312643 MZF1 JASPAR yes 118273810
chr1 38312657 38312668 E2F6 JASPAR yes 28183798
chr1 38312657 38312668 E2F6 JASPAR yes 118273811
chr1 38312683 38312689 MZF1 JASPAR yes 28183799
chr1 38312683 38312689 MZF1 JASPAR yes 118273812
chr1 38312696 38312711 JUND JASPAR yes 28183800
chr1 38312696 38312711 JUND JASPAR yes 118273813
chr1 38312704 38312708 YY1 TRANSFAC yes 28183801
chr1 38312704 38312708 YY1 TRANSFAC yes 118273814
chr1 38312743 38312747 TEAD2 TRANSFAC yes 28183802
chr1 38312743 38312747 TEAD2 TRANSFAC yes 118273815
chr1 38312763 38312767 YY1 TRANSFAC yes 28183803
chr1 38312763 38312767 YY1 TRANSFAC yes 118273816
chr1 38312778 38312788 SP1 JASPAR yes 28183804
chr1 38312778 38312788 SP1 JASPAR yes 118273817
chr1 38312780 38312794 GLIS3 JASPAR yes 28183805
chr1 38312780 38312794 GLIS3 JASPAR yes 118273818
chr1 38312796 38312810 BATF3 JASPAR yes 28183806
chr1 38312796 38312810 BATF3 JASPAR yes 118273819
chr1 38312805 38312817 TAL1 JASPAR yes 28183807
chr1 38312805 38312817 TAL1 JASPAR yes 118273820
chr1 38312805 38312818 ZBTB18 JASPAR yes 28183808
chr1 38312805 38312818 ZBTB18 JASPAR yes 118273821
chr1 38312807 38312817 FIGLA JASPAR yes 28183809
chr1 38312807 38312817 MSC JASPAR yes 28183810
chr1 38312807 38312817 TFAP4 JASPAR yes 28183811
chr1 38312807 38312817 FIGLA JASPAR yes 118273822
chr1 38312807 38312817 MSC JASPAR yes 118273823
chr1 38312807 38312817 TFAP4 JASPAR yes 118273824
chr1 38312807 38312819 TAL1 JASPAR yes 28183812
chr1 38312807 38312819 TAL1 JASPAR yes 118273825
chr1 38312816 38312822 MZF1 JASPAR yes 28183813
chr1 38312816 38312822 MZF1 JASPAR yes 118273826
chr1 38312819 38312827 TBX5 JASPAR yes 28183814
chr1 38312819 38312827 TBX5 JASPAR yes 118273827
chr1 38312819 38312839 RREB1 JASPAR yes 28183815
chr1 38312819 38312839 RREB1 JASPAR yes 118273828
SNP sites on vista1228[chr1:38312444-38312820]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38312481 rs72917981 C T
IRF1 NFKB1 REL STAT1
239816
chr1 38312615 rs372754421 T C
IRF1 RFX3
239817
Genes possibly regulated by vista1228[chr1:38312444-38312820]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 38179552 38230805 - EPHA10 ENSG00000183317.12 38230805 0.97 1.0 527 18361
chr1 38259474 38266809 + MANEAL ENSG00000185090.10 38259474 0.75 0.99 528 47030
chr1 38268616 38273857 - YRDC ENSG00000196449.3 38273857 0.55 1.0 529 61413
chr1 38272651 38275126 + C1orf122 ENSG00000197982.12 38272651 0.58 1.0 530 60207
chr1 38275239 38325292 - MTF1 ENSG00000188786.9 38325292 0.59 1.0 531 87528
chr1 38292232 38293886 - AL929472.1 ENSG00000230610.1 38293886 0.0 0.0 532 81442
chr1 38326369 38412729 - INPP5B ENSG00000204084.8 38412729 0.64 1.0 533 91
Expression level of Genes
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miRNAs possibly regulated by vista1228[chr1:38312444-38312820]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results