EnhancerDB
  1. Home
  2. Enhancers
  3. vista123[chr1:3581269-3581645]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista123[chr1:3581269-3581645]
Back to top
Tissue distribution of vista123
Back to top
Transcription factor that possibly regulate vista123[chr1:3581269-3581645]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3581259 3581269 REL JASPAR yes 26299925
chr1 3581259 3581269 REL JASPAR yes 118219108
chr1 3581282 3581292 ZNF740 JASPAR yes 26299927
chr1 3581282 3581292 ZNF740 JASPAR yes 118219109
chr1 3581282 3581294 E2F8 JASPAR yes 26299928
chr1 3581282 3581294 E2F8 JASPAR yes 118219110
chr1 3581285 3581300 NR2C2 JASPAR yes 26299929
chr1 3581285 3581300 NR2C2 JASPAR yes 118219111
chr1 3581286 3581296 SP1 JASPAR yes 26299930
chr1 3581286 3581296 SP1 JASPAR yes 118219112
chr1 3581287 3581297 SP1 JASPAR yes 26299931
chr1 3581287 3581297 SP1 JASPAR yes 118219113
chr1 3581288 3581292 LFA1 TRANSFAC yes 26299932
chr1 3581288 3581292 LFA1 TRANSFAC yes 118219114
chr1 3581288 3581300 INSM1 JASPAR yes 26299933
chr1 3581288 3581300 INSM1 JASPAR yes 118219115
chr1 3581304 3581318 GLIS3 JASPAR yes 26299934
chr1 3581304 3581318 GLIS3 JASPAR yes 118219116
chr1 3581339 3581344 GATA1 TRANSFAC yes 26299935
chr1 3581339 3581344 GATA1 TRANSFAC yes 118219117
chr1 3581357 3581367 SP1 JASPAR yes 26299936
chr1 3581357 3581367 SP1 JASPAR yes 118219118
chr1 3581380 3581384 ESR1 TRANSFAC yes 26299937
chr1 3581380 3581384 ESR1 TRANSFAC yes 118219119
chr1 3581389 3581395 SOX10 JASPAR yes 26299938
chr1 3581389 3581395 SOX10 JASPAR yes 118219120
chr1 3581394 3581399 ETS2 TRANSFAC yes 26299939
chr1 3581394 3581399 ETS2 TRANSFAC yes 118219121
chr1 3581418 3581429 USF2 JASPAR yes 26299940
chr1 3581418 3581429 USF2 JASPAR yes 118219122
chr1 3581441 3581455 RORA JASPAR yes 26299941
chr1 3581441 3581455 RORA JASPAR yes 118219123
chr1 3581446 3581460 GATA2 JASPAR yes 26299942
chr1 3581446 3581460 GATA2 JASPAR yes 118219124
chr1 3581448 3581456 GATA3 JASPAR yes 26299943
chr1 3581448 3581456 GATA5 JASPAR yes 26299944
chr1 3581448 3581456 GATA3 JASPAR yes 118219125
chr1 3581448 3581456 GATA5 JASPAR yes 118219126
chr1 3581469 3581473 LFA1 TRANSFAC yes 26299945
chr1 3581469 3581473 LFA1 TRANSFAC yes 118219127
chr1 3581488 3581507 REST JASPAR yes 26299946
chr1 3581488 3581507 REST JASPAR yes 118219128
chr1 3581493 3581504 CDX2 JASPAR yes 26299947
chr1 3581493 3581504 CDX2 JASPAR yes 118219129
chr1 3581499 3581503 H4TF2 TRANSFAC yes 26299948
chr1 3581499 3581503 H4TF2 TRANSFAC yes 118219130
chr1 3581530 3581544 BATF3 JASPAR yes 26299949
chr1 3581530 3581544 BATF3 JASPAR yes 118219131
chr1 3581554 3581561 SPIB JASPAR yes 26299950
chr1 3581554 3581561 SPIB JASPAR yes 118219132
chr1 3581565 3581575 RUNX3 JASPAR yes 26299951
chr1 3581565 3581575 RUNX3 JASPAR yes 118219133
chr1 3581573 3581579 SOX10 JASPAR yes 26299952
chr1 3581573 3581579 SOX10 JASPAR yes 118219134
chr1 3581581 3581593 HNF1B JASPAR yes 26299953
chr1 3581581 3581593 HNF1B JASPAR yes 118219135
chr1 3581607 3581615 LBX1 JASPAR yes 26299954
chr1 3581607 3581615 LBX1 JASPAR yes 118219136
chr1 3581610 3581620 EMX1 JASPAR yes 26299955
chr1 3581610 3581620 GSX2 JASPAR yes 26299956
chr1 3581610 3581620 HOXA2 JASPAR yes 26299957
chr1 3581610 3581620 HOXB2 JASPAR yes 26299958
chr1 3581610 3581620 HOXB3 JASPAR yes 26299959
chr1 3581610 3581620 LHX2 JASPAR yes 26299960
chr1 3581610 3581620 MEOX1 JASPAR yes 26299961
chr1 3581610 3581620 NOTO JASPAR yes 26299962
chr1 3581610 3581620 EMX1 JASPAR yes 118219137
chr1 3581610 3581620 GSX2 JASPAR yes 118219138
chr1 3581610 3581620 HOXA2 JASPAR yes 118219139
chr1 3581610 3581620 HOXB2 JASPAR yes 118219140
chr1 3581610 3581620 HOXB3 JASPAR yes 118219141
chr1 3581610 3581620 LHX2 JASPAR yes 118219142
chr1 3581610 3581620 MEOX1 JASPAR yes 118219143
chr1 3581610 3581620 NOTO JASPAR yes 118219144
chr1 3581611 3581619 NKX6-1 JASPAR yes 26299963
chr1 3581611 3581619 NKX6-2 JASPAR yes 26299964
chr1 3581611 3581619 NKX6-1 JASPAR yes 118219145
chr1 3581611 3581619 NKX6-2 JASPAR yes 118219146
chr1 3581611 3581621 POU6F2 JASPAR yes 26299965
chr1 3581611 3581621 POU6F2 JASPAR yes 118219147
chr1 3581634 3581648 PAX6 JASPAR yes 26299966
chr1 3581634 3581648 PAX6 JASPAR yes 118219148
SNP sites on vista123[chr1:3581269-3581645]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3581284 rs186054920 T A,C
E2F8 ZNF740
24256
chr1 3581448 rs74507487 G A
GATA2 GATA3 GATA5 RORA
24257
chr1 3581603 rs74412712 C T no 24258
Genes possibly regulated by vista123[chr1:3581269-3581645]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3406484 3528059 - MEGF6 ENSG00000162591.11 3528059 0.83 1.0 76 46790
chr1 3541566 3546691 + TPRG1L ENSG00000158109.10 3541566 0.55 1.0 77 60297
chr1 3547331 3569325 - WRAP73 ENSG00000116213.11 3569325 0.66 1.0 78 88056
chr1 3569084 3652765 + TP73 ENSG00000078900.10 3569084 0.97 1.0 79 87815
chr1 3668962 3688209 + CCDC27 ENSG00000162592.4 3668962 0.94 1.0 80 12683
Expression level of Genes
Back to top
miRNAs possibly regulated by vista123[chr1:3581269-3581645]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results