EnhancerDB
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  3. vista1232[chr1:38465723-38465839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1232[chr1:38465723-38465839]
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Tissue distribution of vista1232
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Transcription factor that possibly regulate vista1232[chr1:38465723-38465839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38464581 38467653 POLR2A UCSC Txn Factor no Conserved 107802869
chr1 38464581 38467653 POLR2A UCSC Txn Factor no Conserved 107802870
chr1 38465736 38465753 RARA JASPAR yes 28189854
chr1 38465736 38465753 RARA JASPAR yes 118274031
chr1 38465752 38465765 ELF3 JASPAR yes 28189855
chr1 38465752 38465765 ELF3 JASPAR yes 118274032
chr1 38465754 38465765 FLI1 JASPAR yes 28189856
chr1 38465754 38465765 FLI1 JASPAR yes 118274033
chr1 38465755 38465763 EHF JASPAR yes 28189857
chr1 38465755 38465763 EHF JASPAR yes 118274034
chr1 38465759 38465764 ETS2 TRANSFAC yes 28189858
chr1 38465759 38465764 ETS2 TRANSFAC yes 118274035
chr1 38465759 38465767 FEV JASPAR yes 28189859
chr1 38465759 38465767 FEV JASPAR yes 118274036
chr1 38465798 38465816 RARA JASPAR yes 28189860
chr1 38465798 38465816 RARA JASPAR yes 118274037
chr1 38465802 38465823 ZNF263 JASPAR yes 28189861
chr1 38465802 38465823 ZNF263 JASPAR yes 118274038
chr1 38465808 38465817 THAP1 JASPAR yes 28189862
chr1 38465808 38465817 THAP1 JASPAR yes 118274039
chr1 38465809 38465830 ZNF263 JASPAR yes 28189863
chr1 38465809 38465830 ZNF263 JASPAR yes 118274040
chr1 38465816 38465826 ZNF740 JASPAR yes 28189864
chr1 38465816 38465826 ZNF740 JASPAR yes 118274041
chr1 38465820 38465830 SP1 JASPAR yes 28189865
chr1 38465820 38465830 SP1 JASPAR yes 118274042
chr1 38465822 38465836 ZIC1 JASPAR yes 28189866
chr1 38465822 38465836 ZIC1 JASPAR yes 118274043
chr1 38465822 38465837 ZIC3 JASPAR yes 28189867
chr1 38465822 38465837 ZIC4 JASPAR yes 28189868
chr1 38465822 38465837 ZIC3 JASPAR yes 118274044
chr1 38465822 38465837 ZIC4 JASPAR yes 118274045
chr1 38465829 38465840 NFE2L2 JASPAR yes 28189869
chr1 38465829 38465840 NFE2L2 JASPAR yes 118274046
chr1 38465835 38465845 SREBF1 JASPAR yes 28189870
chr1 38465835 38465845 SREBF2 JASPAR yes 28189871
chr1 38465835 38465845 SREBF1 JASPAR yes 118274047
chr1 38465835 38465845 SREBF2 JASPAR yes 118274048
chr1 38465836 38465844 MGA JASPAR yes 28189872
chr1 38465836 38465844 MGA JASPAR yes 118274049
SNP sites on vista1232[chr1:38465723-38465839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38465783 rs114938274 C G
POLR2A
240484
chr1 38465784 rs138919016 A C
POLR2A
240485
chr1 38465827 rs181201848 C A
POLR2A SP1 ZIC1 ZIC3 ZIC4 ZNF263
240486
Genes possibly regulated by vista1232[chr1:38465723-38465839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 38326369 38412729 - INPP5B ENSG00000204084.8 38412729 0.64 1.0 533 47006
chr1 38422647 38456593 - SF3A3 ENSG00000183431.7 38456593 0.78 0.99 534 90870
chr1 38462442 38471278 - FHL3 ENSG00000183386.5 38471278 0.83 1.0 535 94561
chr1 38474930 38490496 + UTP11L ENSG00000183520.7 38474930 0.71 0.98 536 90909
chr1 38509523 38512450 - POU3F1 ENSG00000185668.5 38512450 0.9 1.0 537 53389
Expression level of Genes
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miRNAs possibly regulated by vista1232[chr1:38465723-38465839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results