EnhancerDB
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  3. vista1233[chr1:38466019-38466413]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1233[chr1:38466019-38466413]
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Tissue distribution of vista1233
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Transcription factor that possibly regulate vista1233[chr1:38466019-38466413]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 38464581 38467653 POLR2A UCSC Txn Factor no Conserved 107802869
chr1 38464581 38467653 POLR2A UCSC Txn Factor no Conserved 107802870
chr1 38466011 38466023 TAL1 JASPAR yes 28189902
chr1 38466011 38466023 TAL1 JASPAR yes 118274050
chr1 38466012 38466024 PKNOX2 JASPAR yes 28189904
chr1 38466012 38466024 PKNOX2 JASPAR yes 118274051
chr1 38466012 38466025 ZBTB18 JASPAR yes 28189905
chr1 38466012 38466025 ZBTB18 JASPAR yes 118274052
chr1 38466013 38466023 NEUROG2 JASPAR yes 28189906
chr1 38466013 38466023 NEUROG2 JASPAR yes 118274053
chr1 38466019 38466033 TLX1 JASPAR yes 28189907
chr1 38466019 38466033 TLX1 JASPAR yes 118274054
chr1 38466035 38466045 NFATC3 JASPAR yes 28189908
chr1 38466035 38466045 NFATC3 JASPAR yes 118274055
chr1 38466042 38466053 EBF1 JASPAR yes 28189909
chr1 38466042 38466053 EBF1 JASPAR yes 118274056
chr1 38466042 38466056 EBF1 JASPAR yes 28189910
chr1 38466042 38466056 EBF1 JASPAR yes 118274057
chr1 38466043 38466058 TFAP2C JASPAR yes 28189911
chr1 38466043 38466058 TFAP2C JASPAR yes 118274058
chr1 38466051 38466055 ESR1 TRANSFAC yes 28189912
chr1 38466051 38466055 ESR1 TRANSFAC yes 118274059
chr1 38466057 38466062 H4TF1 TRANSFAC yes 28189913
chr1 38466057 38466062 H4TF1 TRANSFAC yes 118274060
chr1 38466058 38466069 E2F6 JASPAR yes 28189914
chr1 38466058 38466069 E2F6 JASPAR yes 118274061
chr1 38466085 38466103 ESR1 JASPAR yes 28189915
chr1 38466085 38466103 ESR1 JASPAR yes 118274062
chr1 38466090 38466101 E2F6 JASPAR yes 28189916
chr1 38466090 38466101 E2F6 JASPAR yes 118274063
chr1 38466093 38466101 TBX15 JASPAR yes 28189917
chr1 38466093 38466101 TBX15 JASPAR yes 118274064
chr1 38466101 38466107 ETS1 JASPAR yes 28189918
chr1 38466101 38466107 ETS1 JASPAR yes 118274065
chr1 38466106 38466111 H4TF1 TRANSFAC yes 28189919
chr1 38466106 38466111 H4TF1 TRANSFAC yes 118274066
chr1 38466126 38466147 ZNF263 JASPAR yes 28189920
chr1 38466126 38466147 ZNF263 JASPAR yes 118274067
chr1 38466129 38466150 ZNF263 JASPAR yes 28189921
chr1 38466129 38466150 ZNF263 JASPAR yes 118274068
chr1 38466136 38466157 ZNF263 JASPAR yes 28189922
chr1 38466136 38466157 ZNF263 JASPAR yes 118274069
chr1 38466165 38466169 YY1 TRANSFAC yes 28189923
chr1 38466165 38466169 YY1 TRANSFAC yes 118274070
chr1 38466168 38466180 E2F8 JASPAR yes 28189924
chr1 38466168 38466180 E2F8 JASPAR yes 118274071
chr1 38466172 38466178 MZF1 JASPAR yes 28189925
chr1 38466172 38466178 MZF1 JASPAR yes 118274072
chr1 38466175 38466179 H1TF2 TRANSFAC yes 28189926
chr1 38466175 38466179 NFE TRANSFAC yes 28189927
chr1 38466175 38466179 SRF TRANSFAC yes 28189928
chr1 38466175 38466179 H1TF2 TRANSFAC yes 118274073
chr1 38466175 38466179 NFE TRANSFAC yes 118274074
chr1 38466175 38466179 SRF TRANSFAC yes 118274075
chr1 38466194 38466199 SP1 TRANSFAC yes 28189929
chr1 38466194 38466199 SP1 TRANSFAC yes 118274076
chr1 38466196 38466201 TFAP2A TRANSFAC yes 28189930
chr1 38466196 38466201 TFAP2A TRANSFAC yes 118274077
chr1 38466196 38466202 MZF1 JASPAR yes 28189931
chr1 38466196 38466202 MZF1 JASPAR yes 118274078
chr1 38466196 38466217 ZNF263 JASPAR yes 28189932
chr1 38466196 38466217 ZNF263 JASPAR yes 118274079
chr1 38466211 38466222 NFKB1 JASPAR yes 28189933
chr1 38466211 38466222 NFKB1 JASPAR yes 118274080
chr1 38466241 38466251 SP1 JASPAR yes 28189934
chr1 38466241 38466251 SP1 JASPAR yes 118274081
chr1 38466242 38466250 SP1 TRANSFAC yes 28189935
chr1 38466242 38466250 SP1 TRANSFAC yes 118274082
chr1 38466242 38466252 SP1 JASPAR yes 28189936
chr1 38466242 38466252 SP1 JASPAR yes 118274083
chr1 38466255 38466270 RUNX2 JASPAR yes 28189937
chr1 38466255 38466270 RUNX2 JASPAR yes 118274084
chr1 38466265 38466280 PRDM1 JASPAR yes 28189938
chr1 38466265 38466280 STAT2 JASPAR yes 28189939
chr1 38466265 38466280 PRDM1 JASPAR yes 118274085
chr1 38466265 38466280 STAT2 JASPAR yes 118274086
chr1 38466266 38466280 STAT1 JASPAR yes 28189940
chr1 38466266 38466280 STAT1 JASPAR yes 118274087
chr1 38466267 38466277 NFATC3 JASPAR yes 28189941
chr1 38466267 38466277 NFATC3 JASPAR yes 118274088
chr1 38466273 38466277 YY1 TRANSFAC yes 28189942
chr1 38466273 38466277 YY1 TRANSFAC yes 118274089
chr1 38466286 38466292 SOX10 JASPAR yes 28189943
chr1 38466286 38466292 SOX10 JASPAR yes 118274090
chr1 38466291 38466303 FOXI1 JASPAR yes 28189944
chr1 38466291 38466303 FOXI1 JASPAR yes 118274091
chr1 38466300 38466315 JUND JASPAR yes 28189945
chr1 38466300 38466315 JUND JASPAR yes 118274092
chr1 38466301 38466314 JUN JASPAR yes 28189946
chr1 38466301 38466314 JUN JASPAR yes 118274093
chr1 38466302 38466316 ATF7 JASPAR yes 28189947
chr1 38466302 38466316 BATF3 JASPAR yes 28189948
chr1 38466302 38466316 ATF7 JASPAR yes 118274094
chr1 38466302 38466316 BATF3 JASPAR yes 118274095
chr1 38466303 38466315 JDP2 JASPAR yes 28189949
chr1 38466303 38466315 JDP2 JASPAR yes 118274096
chr1 38466303 38466318 JUND JASPAR yes 28189950
chr1 38466303 38466318 JUND JASPAR yes 118274097
chr1 38466304 38466317 JUN JASPAR yes 28189951
chr1 38466304 38466317 JUN JASPAR yes 118274098
chr1 38466305 38466313 CREB1 JASPAR yes 28189952
chr1 38466305 38466313 CREB1 JASPAR yes 118274099
chr1 38466308 38466312 ESR1 TRANSFAC yes 28189953
chr1 38466308 38466312 ESR1 TRANSFAC yes 118274100
chr1 38466312 38466318 ZNF354C JASPAR yes 28189954
chr1 38466312 38466318 ZNF354C JASPAR yes 118274101
chr1 38466316 38466328 NHLH1 JASPAR yes 28189955
chr1 38466316 38466328 NHLH1 JASPAR yes 118274102
chr1 38466316 38466329 ZBTB18 JASPAR yes 28189956
chr1 38466316 38466329 ZBTB18 JASPAR yes 118274103
chr1 38466317 38466327 NHLH1 JASPAR yes 28189957
chr1 38466317 38466327 NHLH1 JASPAR yes 118274104
chr1 38466359 38466364 ETS2 TRANSFAC yes 28189958
chr1 38466359 38466364 ETS2 TRANSFAC yes 118274105
chr1 38466363 38466383 PPARG JASPAR yes 28189959
chr1 38466363 38466383 PPARG JASPAR yes 118274106
chr1 38466365 38466375 RELA JASPAR yes 28189960
chr1 38466365 38466375 RELA JASPAR yes 118274107
chr1 38466365 38466376 NFKB1 JASPAR yes 28189961
chr1 38466365 38466376 NFKB1 JASPAR yes 118274108
chr1 38466370 38466385 HSF1 JASPAR yes 28189962
chr1 38466370 38466385 HSF1 JASPAR yes 118274109
chr1 38466386 38466392 NFE2 TRANSFAC yes 28189963
chr1 38466386 38466392 NFE2 TRANSFAC yes 118274110
SNP sites on vista1233[chr1:38466019-38466413]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 38466068 rs371824178 C T
E2F6 POLR2A
240489
chr1 38466094 rs189055160 T A,C
E2F6 ESR1 POLR2A TBX15
240490
chr1 38466179 rs144417003 A C,G
E2F8 H1TF2 NFE POLR2A SRF
240491
chr1 38466188 rs577825823 C T
POLR2A
240492
chr1 38466394 rs576379251 G A
POLR2A
240493
chr1 38466413 rs148431068 C G
POLR2A
240494
Genes possibly regulated by vista1233[chr1:38466019-38466413]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 38326369 38412729 - INPP5B ENSG00000204084.8 38412729 0.64 1.0 533 46710
chr1 38422647 38456593 - SF3A3 ENSG00000183431.7 38456593 0.78 0.99 534 90574
chr1 38462442 38471278 - FHL3 ENSG00000183386.5 38471278 0.83 1.0 535 95135
chr1 38474930 38490496 + UTP11L ENSG00000183520.7 38474930 0.71 0.98 536 91483
chr1 38509523 38512450 - POU3F1 ENSG00000185668.5 38512450 0.9 1.0 537 53963
Expression level of Genes
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miRNAs possibly regulated by vista1233[chr1:38466019-38466413]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results